RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 NYXQ9GZU5 481 aa29.71■■■□□ 2.35
LSM7-202ENST00000585395 DDX21Q9NR30 783 aaKnown RBP eCLIP29.71■■■□□ 2.35
LSM7-202ENST00000585395 CHPF2Q9P2E5 772 aa29.71■■■□□ 2.35
LSM7-202ENST00000585395 NFKBIEO00221 500 aa29.7■■■□□ 2.35
LSM7-202ENST00000585395 PDIA6Q15084 440 aa29.7■■■□□ 2.35
LSM7-202ENST00000585395 ELL2O00472 640 aaPredicted RBP29.69■■■□□ 2.34
LSM7-202ENST00000585395 COPS6Q7L5N1 327 aa29.69■■■□□ 2.34
LSM7-202ENST00000585395 XAGE3Q8WTP9 111 aa29.69■■■□□ 2.34
LSM7-202ENST00000585395 CREBZFQ9NS37 354 aa29.69■■■□□ 2.34
LSM7-202ENST00000585395 TWISTNBQ3B726 338 aaPredicted RBP29.68■■■□□ 2.34
LSM7-202ENST00000585395 CCDC30Q5VVM6 783 aa29.68■■■□□ 2.34
LSM7-202ENST00000585395 GIGYF2Q6Y7W6 1299 aaKnown RBP29.68■■■□□ 2.34
LSM7-202ENST00000585395 C8orf58Q8NAV2 365 aa29.68■■■□□ 2.34
LSM7-202ENST00000585395 DBF4Q9UBU7 674 aaPredicted RBP29.68■■■□□ 2.34
LSM7-202ENST00000585395 COL11A2P13942 1736 aaPredicted RBP29.67■■■□□ 2.34
LSM7-202ENST00000585395 CACNA1SQ13698 1873 aa29.65■■■□□ 2.34
LSM7-202ENST00000585395 SLFN5Q08AF3 891 aa29.65■■■□□ 2.34
LSM7-202ENST00000585395 HSP90AB3PQ58FF7 597 aa29.65■■■□□ 2.34
LSM7-202ENST00000585395 SPINK5Q9NQ38 1064 aaPredicted RBP29.65■■■□□ 2.34
LSM7-202ENST00000585395 EXOSC9Q06265 439 aaKnown RBP29.64■■■□□ 2.34
LSM7-202ENST00000585395 CHADLQ6NUI6 762 aa29.64■■■□□ 2.34
LSM7-202ENST00000585395 LRP10Q7Z4F1 713 aa29.64■■■□□ 2.34
LSM7-202ENST00000585395 STK31Q9BXU1 1019 aa29.64■■■□□ 2.34
LSM7-202ENST00000585395 HYPKQ9NX55 129 aa29.64■■■□□ 2.34
LSM7-202ENST00000585395 ZNF219Q9P2Y4 722 aaPredicted RBP29.64■■■□□ 2.34
LSM7-202ENST00000585395 PARP10Q53GL7 1025 aa29.63■■■□□ 2.33
LSM7-202ENST00000585395 PPP1R42Q7Z4L9 355 aa29.63■■■□□ 2.33
LSM7-202ENST00000585395 CNKSR1Q969H4 720 aa29.63■■■□□ 2.33
LSM7-202ENST00000585395 MASTLQ96GX5 879 aa29.63■■■□□ 2.33
LSM7-202ENST00000585395 ERFEQ4G0M1 354 aa29.62■■■□□ 2.33
LSM7-202ENST00000585395 NUTM1Q86Y26 1132 aa29.62■■■□□ 2.33
LSM7-202ENST00000585395 DICER1Q9UPY3 1922 aaKnown RBP29.62■■■□□ 2.33
LSM7-202ENST00000585395 ZBED9Q6R2W3 1325 aa29.62■■■□□ 2.33
LSM7-202ENST00000585395 ANKRD36CQ5JPF3 1778 aa29.62■■■□□ 2.33
LSM7-202ENST00000585395 STYK1Q6J9G0 422 aa29.61■■■□□ 2.33
LSM7-202ENST00000585395 MKRN1Q9UHC7 482 aaKnown RBP29.61■■■□□ 2.33
LSM7-202ENST00000585395 UBN2Q6ZU65 1347 aa29.61■■■□□ 2.33
LSM7-202ENST00000585395 SRGNP10124 158 aa29.6■■■□□ 2.33
LSM7-202ENST00000585395 ZNF34Q8IZ26 560 aa29.6■■■□□ 2.33
LSM7-202ENST00000585395 TSPYL6Q8N831 410 aa29.6■■■□□ 2.33
LSM7-202ENST00000585395 NPR1P16066 1061 aa29.59■■■□□ 2.33
LSM7-202ENST00000585395 SUSD4Q5VX71 490 aa29.59■■■□□ 2.33
LSM7-202ENST00000585395 PRDM10Q9NQV6 1147 aa29.59■■■□□ 2.33
LSM7-202ENST00000585395 IBTKQ9P2D0 1353 aaPredicted RBP29.59■■■□□ 2.33
LSM7-202ENST00000585395 FER1L6Q2WGJ9 1857 aa29.57■■■□□ 2.32
LSM7-202ENST00000585395 LTBP3Q9NS15 1303 aa29.57■■■□□ 2.32
LSM7-202ENST00000585395 C21orf2O43822 256 aa29.57■■■□□ 2.32
LSM7-202ENST00000585395 PLBD2Q8NHP8 589 aa29.57■■■□□ 2.32
LSM7-202ENST00000585395 UTP14AQ9BVJ6 771 aaKnown RBP29.57■■■□□ 2.32
LSM7-202ENST00000585395 ABCC12Q96J65 1359 aa29.56■■■□□ 2.32
LSM7-202ENST00000585395 FOXN1O15353 648 aa29.56■■■□□ 2.32
LSM7-202ENST00000585395 VAMP4O75379 141 aa29.56■■■□□ 2.32
LSM7-202ENST00000585395 PRPF40BQ6NWY9 871 aaKnown RBP29.56■■■□□ 2.32
LSM7-202ENST00000585395 ANKRD13DQ6ZTN6 518 aa29.56■■■□□ 2.32
LSM7-202ENST00000585395 CDCA7LQ96GN5 454 aa29.56■■■□□ 2.32
LSM7-202ENST00000585395 CNTNAP1P78357 1384 aa29.55■■■□□ 2.32
LSM7-202ENST00000585395 TRMT2AQ8IZ69 625 aaKnown RBP29.55■■■□□ 2.32
LSM7-202ENST00000585395 RPGRQ92834 1020 aaKnown RBP29.55■■■□□ 2.32
LSM7-202ENST00000585395 ZNF428Q96B54 188 aa29.55■■■□□ 2.32
LSM7-202ENST00000585395 NTSR2O95665 410 aa29.54■■■□□ 2.32
LSM7-202ENST00000585395 CT47B1P0C2W7 299 aaPredicted RBP29.54■■■□□ 2.32
LSM7-202ENST00000585395 TCIRG1Q13488 830 aa29.54■■■□□ 2.32
LSM7-202ENST00000585395 RIC3Q7Z5B4 369 aa29.54■■■□□ 2.32
LSM7-202ENST00000585395 ARFGEF2Q9Y6D5 1785 aa29.54■■■□□ 2.32
LSM7-202ENST00000585395 SLX4Q8IY92 1834 aa29.53■■■□□ 2.32
LSM7-202ENST00000585395 DDX58O95786 925 aaKnown RBP29.53■■■□□ 2.32
LSM7-202ENST00000585395 SOGA3Q5TF21 947 aa29.53■■■□□ 2.32
LSM7-202ENST00000585395 TAOK3Q9H2K8 898 aa29.53■■■□□ 2.32
LSM7-202ENST00000585395 ALDH1B1P30837 517 aa29.52■■■□□ 2.32
LSM7-202ENST00000585395 POTEIP0CG38 1075 aa29.51■■■□□ 2.31
LSM7-202ENST00000585395 POTEJP0CG39 1038 aa29.51■■■□□ 2.31
LSM7-202ENST00000585395 CTCFP49711 727 aaPredicted RBP29.51■■■□□ 2.31
LSM7-202ENST00000585395 AIDAQ96BJ3 306 aa29.51■■■□□ 2.31
LSM7-202ENST00000585395 TRMT112Q9UI30 125 aaKnown RBP29.51■■■□□ 2.31
LSM7-202ENST00000585395 RNF123Q5XPI4 1314 aa29.5■■■□□ 2.31
LSM7-202ENST00000585395 KLRG2A4D1S0 409 aaPredicted RBP29.5■■■□□ 2.31
LSM7-202ENST00000585395 IQCA1LA6NCM1 817 aa29.5■■■□□ 2.31
LSM7-202ENST00000585395 DDNO94850 711 aaPredicted RBP29.5■■■□□ 2.31
LSM7-202ENST00000585395 NLRP10Q86W26 655 aa29.5■■■□□ 2.31
LSM7-202ENST00000585395 PHAXQ9H814 394 aaKnown RBP29.5■■■□□ 2.31
LSM7-202ENST00000585395 PASKQ96RG2 1323 aa29.49■■■□□ 2.31
LSM7-202ENST00000585395 LDHDQ86WU2 507 aa29.49■■■□□ 2.31
LSM7-202ENST00000585395 NLRP3Q96P20 1036 aa29.49■■■□□ 2.31
LSM7-202ENST00000585395 RIC1Q4ADV7 1423 aa29.48■■■□□ 2.31
LSM7-202ENST00000585395 SLC4A2P04920 1241 aa29.48■■■□□ 2.31
LSM7-202ENST00000585395 CACNA1FO60840 1977 aa29.48■■■□□ 2.31
LSM7-202ENST00000585395 ATP5J2-PTCD1G3V325 749 aa29.47■■■□□ 2.31
LSM7-202ENST00000585395 TCERG1O14776 1098 aaKnown RBP29.47■■■□□ 2.31
LSM7-202ENST00000585395 RBM17Q96I25 401 aaKnown RBP29.47■■■□□ 2.31
LSM7-202ENST00000585395 SH3TC1Q8TE82 1336 aa29.46■■■□□ 2.31
LSM7-202ENST00000585395 SLC34A2O95436 690 aa29.46■■■□□ 2.31
LSM7-202ENST00000585395 CCDC93Q567U6 631 aa29.46■■■□□ 2.31
LSM7-202ENST00000585395 SCN4AP35499 1836 aa29.45■■■□□ 2.31
LSM7-202ENST00000585395 L3MBTL3Q96JM7 780 aaPredicted RBP29.45■■■□□ 2.31
LSM7-202ENST00000585395 TMEM88BA6NKF7 163 aa29.44■■■□□ 2.3
LSM7-202ENST00000585395 VEGFBP49765 207 aa29.44■■■□□ 2.3
LSM7-202ENST00000585395 CRY2Q49AN0 593 aa29.44■■■□□ 2.3
LSM7-202ENST00000585395 MYD88Q99836 296 aa29.43■■■□□ 2.3
LSM7-202ENST00000585395 TAF1DQ9H5J8 278 aaPredicted RBP29.43■■■□□ 2.3
LSM7-202ENST00000585395 HCLS1P14317 486 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms