RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
SCAMP4-209ENST00000585335 TRMT112Q9UI30 125 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-209ENST00000585335 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
SCAMP4-209ENST00000585335 ALDH1L1O75891 902 aa18.46■□□□□ 0.55
SCAMP4-209ENST00000585335 HSP90B1P14625 803 aaKnown RBP18.46■□□□□ 0.55
SCAMP4-209ENST00000585335 CCT4P50991 539 aaKnown RBP18.46■□□□□ 0.55
SCAMP4-209ENST00000585335 SUSD4Q5VX71 490 aa18.46■□□□□ 0.55
SCAMP4-209ENST00000585335 AFDNP55196 1824 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 NTSR2O95665 410 aa18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 IGKV5-2P06315 115 aa18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 TRIM27P14373 513 aa18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
SCAMP4-209ENST00000585335 NRXN2Q9P2S2 1712 aa18.44■□□□□ 0.54
SCAMP4-209ENST00000585335 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
SCAMP4-209ENST00000585335 PRR5LQ6MZQ0 368 aa18.44■□□□□ 0.54
SCAMP4-209ENST00000585335 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
SCAMP4-209ENST00000585335 GCKRQ14397 625 aa18.43■□□□□ 0.54
SCAMP4-209ENST00000585335 DZIP1LQ8IYY4 767 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-209ENST00000585335 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
SCAMP4-209ENST00000585335 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
SCAMP4-209ENST00000585335 ABCC4O15439 1325 aa18.43■□□□□ 0.54
SCAMP4-209ENST00000585335 PCCAP05165 728 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-209ENST00000585335 BRIP1Q9BX63 1249 aa18.42■□□□□ 0.54
SCAMP4-209ENST00000585335 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-209ENST00000585335 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
SCAMP4-209ENST00000585335 PDE6BP35913 854 aa18.41■□□□□ 0.54
SCAMP4-209ENST00000585335 ERFEQ4G0M1 354 aa18.41■□□□□ 0.54
SCAMP4-209ENST00000585335 NUTM1Q86Y26 1132 aa18.41■□□□□ 0.54
SCAMP4-209ENST00000585335 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
SCAMP4-209ENST00000585335 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-209ENST00000585335 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-209ENST00000585335 FAM89AQ96GI7 184 aa18.4■□□□□ 0.54
SCAMP4-209ENST00000585335 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
SCAMP4-209ENST00000585335 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-209ENST00000585335 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
SCAMP4-209ENST00000585335 GRM8O00222 908 aa18.39■□□□□ 0.53
SCAMP4-209ENST00000585335 IRS4O14654 1257 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-209ENST00000585335 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
SCAMP4-209ENST00000585335 FHDC1Q9C0D6 1143 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-209ENST00000585335 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
SCAMP4-209ENST00000585335 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 TGFB2P61812 414 aa18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 SLC10A5Q5PT55 438 aa18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 NLRP3Q96P20 1036 aa18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 ABCC12Q96J65 1359 aa18.38■□□□□ 0.53
SCAMP4-209ENST00000585335 KIF13BQ9NQT8 1826 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 H0YIN7 160 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 H7C1W4 665 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 PLIN1O60240 522 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 PDE3AQ14432 1141 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 ITPRIPQ8IWB1 547 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 TMEM57Q8N5G2 664 aa18.37■□□□□ 0.53
SCAMP4-209ENST00000585335 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
SCAMP4-209ENST00000585335 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
SCAMP4-209ENST00000585335 TNNQ9UQP3 1299 aa18.36■□□□□ 0.53
SCAMP4-209ENST00000585335 PDE8AO60658 829 aa18.35■□□□□ 0.53
SCAMP4-209ENST00000585335 GNAI3P08754 354 aa18.35■□□□□ 0.53
SCAMP4-209ENST00000585335 UBTFL1P0CB47 393 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-209ENST00000585335 RPGRQ92834 1020 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-209ENST00000585335 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-209ENST00000585335 LAMB2P55268 1798 aa18.35■□□□□ 0.53
SCAMP4-209ENST00000585335 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
SCAMP4-209ENST00000585335 PANK1Q8TE04 598 aa18.34■□□□□ 0.53
SCAMP4-209ENST00000585335 JARID2Q92833 1246 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-209ENST00000585335 SYT17Q9BSW7 474 aa18.34■□□□□ 0.53
SCAMP4-209ENST00000585335 ANKRD31Q8N7Z5 1873 aa18.33■□□□□ 0.53
SCAMP4-209ENST00000585335 UTYO14607 1347 aa18.33■□□□□ 0.53
SCAMP4-209ENST00000585335 RLBP1P12271 317 aa18.33■□□□□ 0.52
SCAMP4-209ENST00000585335 USP44Q9H0E7 712 aa18.33■□□□□ 0.52
SCAMP4-209ENST00000585335 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 NPR1P16066 1061 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 DPEP1P16444 411 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 CASP7P55210 303 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 CTSWP56202 376 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 MASTLQ96GX5 879 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 RBM17Q96I25 401 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 PLA2G12BQ9BX93 195 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-209ENST00000585335 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 A0A0G2JLW4 131 aa18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 SRGNP10124 158 aa18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 CHRNA5P30532 468 aa18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 STYK1Q6J9G0 422 aa18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 NLGN2Q8NFZ4 835 aa18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-209ENST00000585335 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-209ENST00000585335 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-209ENST00000585335 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
SCAMP4-209ENST00000585335 MEIS3Q99687 375 aa18.3■□□□□ 0.52
SCAMP4-209ENST00000585335 PIM2Q9P1W9 311 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms