RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 ZNF219Q9P2Y4 722 aaPredicted RBP30.45■■■□□ 2.47
NDEL1-219ENST00000585098 ANKRD36CQ5JPF3 1778 aa30.44■■■□□ 2.46
NDEL1-219ENST00000585098 PRPF40BQ6NWY9 871 aaKnown RBP30.44■■■□□ 2.46
NDEL1-219ENST00000585098 ISCA1Q9BUE6 129 aa30.44■■■□□ 2.46
NDEL1-219ENST00000585098 ATP5J2-PTCD1G3V325 749 aa30.43■■■□□ 2.46
NDEL1-219ENST00000585098 VAMP4O75379 141 aa30.43■■■□□ 2.46
NDEL1-219ENST00000585098 RIC1Q4ADV7 1423 aa30.43■■■□□ 2.46
NDEL1-219ENST00000585098 ZNF428Q96B54 188 aa30.43■■■□□ 2.46
NDEL1-219ENST00000585098 TRMT112Q9UI30 125 aaKnown RBP30.43■■■□□ 2.46
NDEL1-219ENST00000585098 TNRC6CQ9HCJ0 1690 aaKnown RBP30.42■■■□□ 2.46
NDEL1-219ENST00000585098 C21orf2O43822 256 aa30.42■■■□□ 2.46
NDEL1-219ENST00000585098 DDX58O95786 925 aaKnown RBP30.42■■■□□ 2.46
NDEL1-219ENST00000585098 CRY2Q49AN0 593 aa30.42■■■□□ 2.46
NDEL1-219ENST00000585098 RNF123Q5XPI4 1314 aa30.42■■■□□ 2.46
NDEL1-219ENST00000585098 ADCY9O60503 1353 aa30.41■■■□□ 2.46
NDEL1-219ENST00000585098 SLC4A2P04920 1241 aa30.41■■■□□ 2.46
NDEL1-219ENST00000585098 RASSF7Q02833 373 aa30.4■■■□□ 2.46
NDEL1-219ENST00000585098 SLC10A5Q5PT55 438 aa30.4■■■□□ 2.46
NDEL1-219ENST00000585098 C9orf131Q5VYM1 1079 aa30.39■■■□□ 2.46
NDEL1-219ENST00000585098 SYNE4Q8N205 404 aa30.39■■■□□ 2.46
NDEL1-219ENST00000585098 RPGRQ92834 1020 aaKnown RBP30.39■■■□□ 2.46
NDEL1-219ENST00000585098 ARFGEF2Q9Y6D5 1785 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 ALDH1B1P30837 517 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 C3orf67Q6ZVT6 689 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 G2E3Q7L622 706 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 NLRP3Q96P20 1036 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 MYD88Q99836 296 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 SH3TC1Q8TE82 1336 aa30.38■■■□□ 2.45
NDEL1-219ENST00000585098 TRIM28Q13263 835 aaKnown RBP30.37■■■□□ 2.45
NDEL1-219ENST00000585098 SLX4Q8IY92 1834 aa30.37■■■□□ 2.45
NDEL1-219ENST00000585098 HCLS1P14317 486 aaPredicted RBP30.36■■■□□ 2.45
NDEL1-219ENST00000585098 MAP3K2Q9Y2U5 619 aa30.36■■■□□ 2.45
NDEL1-219ENST00000585098 PI4KAP2A4QPH2 592 aa30.35■■■□□ 2.45
NDEL1-219ENST00000585098 NFKBIEO00221 500 aa30.35■■■□□ 2.45
NDEL1-219ENST00000585098 KSR2Q6VAB6 950 aa30.35■■■□□ 2.45
NDEL1-219ENST00000585098 PI4KAP1Q8N8J0 262 aa30.35■■■□□ 2.45
NDEL1-219ENST00000585098 C7orf43Q8WVR3 580 aa30.35■■■□□ 2.45
NDEL1-219ENST00000585098 METTL22Q9BUU2 404 aaPredicted RBP30.35■■■□□ 2.45
NDEL1-219ENST00000585098 RNF181Q9P0P0 153 aa30.35■■■□□ 2.45
NDEL1-219ENST00000585098 E9PSI1 815 aa30.34■■■□□ 2.45
NDEL1-219ENST00000585098 HOXA10P31260 410 aaPredicted RBP30.34■■■□□ 2.45
NDEL1-219ENST00000585098 SOGA3Q5TF21 947 aa30.34■■■□□ 2.45
NDEL1-219ENST00000585098 FAM89AQ96GI7 184 aa30.34■■■□□ 2.45
NDEL1-219ENST00000585098 RBM17Q96I25 401 aaKnown RBP30.33■■■□□ 2.45
NDEL1-219ENST00000585098 CACNA1SQ13698 1873 aa30.33■■■□□ 2.45
NDEL1-219ENST00000585098 FLIIQ13045 1269 aa30.32■■■□□ 2.44
NDEL1-219ENST00000585098 ZNF526Q8TF50 670 aaPredicted RBP30.32■■■□□ 2.44
NDEL1-219ENST00000585098 LMNB1P20700 586 aa30.31■■■□□ 2.44
NDEL1-219ENST00000585098 PRELPP51888 382 aa30.31■■■□□ 2.44
NDEL1-219ENST00000585098 SLFN5Q08AF3 891 aa30.31■■■□□ 2.44
NDEL1-219ENST00000585098 RTL5Q5HYW3 569 aaPredicted RBP30.31■■■□□ 2.44
NDEL1-219ENST00000585098 CRAMP1Q96RY5 1269 aa30.31■■■□□ 2.44
NDEL1-219ENST00000585098 CCDC93Q567U6 631 aa30.3■■■□□ 2.44
NDEL1-219ENST00000585098 CCDC191Q8NCU4 936 aa30.3■■■□□ 2.44
NDEL1-219ENST00000585098 OLFM4Q6UX06 510 aa30.29■■■□□ 2.44
NDEL1-219ENST00000585098 CDCA7LQ96GN5 454 aa30.29■■■□□ 2.44
NDEL1-219ENST00000585098 TAOK3Q9H2K8 898 aa30.29■■■□□ 2.44
NDEL1-219ENST00000585098 CWC25Q9NXE8 425 aaPredicted RBP30.29■■■□□ 2.44
NDEL1-219ENST00000585098 FKBP5Q13451 457 aaPredicted RBP30.28■■■□□ 2.44
NDEL1-219ENST00000585098 ZBTB38Q8NAP3 1195 aaPredicted RBP30.28■■■□□ 2.44
NDEL1-219ENST00000585098 GPBP1L1Q9HC44 474 aaPredicted RBP30.28■■■□□ 2.44
NDEL1-219ENST00000585098 NEXNQ0ZGT2 675 aa30.27■■■□□ 2.44
NDEL1-219ENST00000585098 LTBP3Q9NS15 1303 aa30.26■■■□□ 2.44
NDEL1-219ENST00000585098 IRS4O14654 1257 aaPredicted RBP30.26■■■□□ 2.43
NDEL1-219ENST00000585098 SBF1O95248 1867 aa30.25■■■□□ 2.43
NDEL1-219ENST00000585098 IGKV5-2P06315 115 aa30.25■■■□□ 2.43
NDEL1-219ENST00000585098 FER1L6Q2WGJ9 1857 aa30.25■■■□□ 2.43
NDEL1-219ENST00000585098 ABCC4O15439 1325 aa30.24■■■□□ 2.43
NDEL1-219ENST00000585098 PPEF1O14829 653 aaPredicted RBP30.24■■■□□ 2.43
NDEL1-219ENST00000585098 RTKN2Q8IZC4 609 aa30.24■■■□□ 2.43
NDEL1-219ENST00000585098 PCCAP05165 728 aaPredicted RBP30.23■■■□□ 2.43
NDEL1-219ENST00000585098 DDX46Q7L014 1031 aaKnown RBP30.23■■■□□ 2.43
NDEL1-219ENST00000585098 JARID2Q92833 1246 aaPredicted RBP30.23■■■□□ 2.43
NDEL1-219ENST00000585098 CWF19L2Q2TBE0 894 aaKnown RBP30.22■■■□□ 2.43
NDEL1-219ENST00000585098 CC2D2BQ6DHV5 1058 aa30.22■■■□□ 2.43
NDEL1-219ENST00000585098 DNAAF4Q8WXU2 420 aa30.22■■■□□ 2.43
NDEL1-219ENST00000585098 LAMB2P55268 1798 aa30.22■■■□□ 2.43
NDEL1-219ENST00000585098 DDX60Q8IY21 1712 aaKnown RBP30.22■■■□□ 2.43
NDEL1-219ENST00000585098 NEURL1BA8MQ27 555 aa30.21■■■□□ 2.43
NDEL1-219ENST00000585098 FKBP4Q02790 459 aaKnown RBP eCLIP30.21■■■□□ 2.43
NDEL1-219ENST00000585098 SF3B3Q15393 1217 aaKnown RBP30.21■■■□□ 2.43
NDEL1-219ENST00000585098 TRMT2AQ8IZ69 625 aaKnown RBP30.21■■■□□ 2.43
NDEL1-219ENST00000585098 HSP90B1P14625 803 aaKnown RBP30.2■■■□□ 2.43
NDEL1-219ENST00000585098 ZC3H4Q9UPT8 1303 aaKnown RBP30.2■■■□□ 2.42
NDEL1-219ENST00000585098 CACNA1FO60840 1977 aa30.19■■■□□ 2.42
NDEL1-219ENST00000585098 SLC51AQ86UW1 340 aa30.19■■■□□ 2.42
NDEL1-219ENST00000585098 BBOX1O75936 387 aa30.18■■■□□ 2.42
NDEL1-219ENST00000585098 GRAPQ13588 217 aa30.18■■■□□ 2.42
NDEL1-219ENST00000585098 GRAPLQ8TC17 118 aaPredicted RBP30.18■■■□□ 2.42
NDEL1-219ENST00000585098 SNED1Q8TER0 1413 aa30.17■■■□□ 2.42
NDEL1-219ENST00000585098 F6X3S4 739 aa30.17■■■□□ 2.42
NDEL1-219ENST00000585098 TMX4Q9H1E5 349 aaPredicted RBP30.17■■■□□ 2.42
NDEL1-219ENST00000585098 ZNF277Q9NRM2 450 aaPredicted RBP30.17■■■□□ 2.42
NDEL1-219ENST00000585098 ATP6V0A2Q9Y487 856 aa30.17■■■□□ 2.42
NDEL1-219ENST00000585098 PDE8AO60658 829 aa30.16■■■□□ 2.42
NDEL1-219ENST00000585098 LINS1Q8NG48 757 aa30.16■■■□□ 2.42
NDEL1-219ENST00000585098 GRIPAP1Q4V328 841 aa30.15■■■□□ 2.42
NDEL1-219ENST00000585098 PSMD1Q99460 953 aa30.15■■■□□ 2.42
NDEL1-219ENST00000585098 CDHR2Q9BYE9 1310 aa30.15■■■□□ 2.42
NDEL1-219ENST00000585098 CCDC88AQ3V6T2 1871 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms