RNA–Protein interactions for RNA: ENST00000585027.1

TMEM199-209, Transcript of transmembrane protein 199, humanhuman

TSL 2

Gene TMEM199, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-209ENST00000585027 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
TMEM199-209ENST00000585027 RTKN2Q8IZC4 609 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
TMEM199-209ENST00000585027 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
TMEM199-209ENST00000585027 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
TMEM199-209ENST00000585027 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
TMEM199-209ENST00000585027 CRAMP1Q96RY5 1269 aa13.13□□□□□ -0.31
TMEM199-209ENST00000585027 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
TMEM199-209ENST00000585027 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
TMEM199-209ENST00000585027 LAS1LQ9Y4W2 734 aaKnown RBP13.13□□□□□ -0.31
TMEM199-209ENST00000585027 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 NLRP10Q86W26 655 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 PSMD1Q99460 953 aa13.12□□□□□ -0.31
TMEM199-209ENST00000585027 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
TMEM199-209ENST00000585027 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
TMEM199-209ENST00000585027 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
TMEM199-209ENST00000585027 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
TMEM199-209ENST00000585027 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
TMEM199-209ENST00000585027 DBF4Q9UBU7 674 aaPredicted RBP13.11□□□□□ -0.31
TMEM199-209ENST00000585027 COL4A5P29400 1685 aa13.11□□□□□ -0.31
TMEM199-209ENST00000585027 SCN4AP35499 1836 aa13.11□□□□□ -0.31
TMEM199-209ENST00000585027 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
TMEM199-209ENST00000585027 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
TMEM199-209ENST00000585027 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
TMEM199-209ENST00000585027 GNAI1P63096 354 aa13.1□□□□□ -0.31
TMEM199-209ENST00000585027 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
TMEM199-209ENST00000585027 SYNE4Q8N205 404 aa13.1□□□□□ -0.31
TMEM199-209ENST00000585027 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
TMEM199-209ENST00000585027 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
TMEM199-209ENST00000585027 NLRP3Q96P20 1036 aa13.1□□□□□ -0.31
TMEM199-209ENST00000585027 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
TMEM199-209ENST00000585027 FZD9O00144 591 aa13.09□□□□□ -0.31
TMEM199-209ENST00000585027 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
TMEM199-209ENST00000585027 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
TMEM199-209ENST00000585027 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
TMEM199-209ENST00000585027 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
TMEM199-209ENST00000585027 ADAMTSL1Q8N6G6 1762 aa13.08□□□□□ -0.32
TMEM199-209ENST00000585027 PPEF1O14829 653 aaPredicted RBP13.08□□□□□ -0.32
TMEM199-209ENST00000585027 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
TMEM199-209ENST00000585027 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
TMEM199-209ENST00000585027 ABCC4O15439 1325 aa13.08□□□□□ -0.32
TMEM199-209ENST00000585027 SH3TC1Q8TE82 1336 aa13.08□□□□□ -0.32
TMEM199-209ENST00000585027 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
TMEM199-209ENST00000585027 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
TMEM199-209ENST00000585027 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
TMEM199-209ENST00000585027 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
TMEM199-209ENST00000585027 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
TMEM199-209ENST00000585027 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
TMEM199-209ENST00000585027 HCLS1P14317 486 aaPredicted RBP13.06□□□□□ -0.32
TMEM199-209ENST00000585027 HTRA3P83110 453 aa13.06□□□□□ -0.32
TMEM199-209ENST00000585027 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
TMEM199-209ENST00000585027 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
TMEM199-209ENST00000585027 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
TMEM199-209ENST00000585027 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
TMEM199-209ENST00000585027 TAF1P21675 1872 aa13.05□□□□□ -0.32
TMEM199-209ENST00000585027 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
TMEM199-209ENST00000585027 DUOX1Q9NRD9 1551 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 ATP5J2-PTCD1G3V325 749 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
TMEM199-209ENST00000585027 BBOX1O75936 387 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
TMEM199-209ENST00000585027 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 GPC2Q8N158 579 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 KLRG1Q96E93 195 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 VPS33BQ9H267 617 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
TMEM199-209ENST00000585027 COL4A1P02462 1669 aa13.04□□□□□ -0.32
TMEM199-209ENST00000585027 GRAPQ13588 217 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 GRAPLQ8TC17 118 aaPredicted RBP13.03□□□□□ -0.32
TMEM199-209ENST00000585027 JDP2Q8WYK2 163 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 IL16Q14005 1332 aa13.03□□□□□ -0.32
TMEM199-209ENST00000585027 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
TMEM199-209ENST00000585027 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
TMEM199-209ENST00000585027 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.33
TMEM199-209ENST00000585027 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.33
TMEM199-209ENST00000585027 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
TMEM199-209ENST00000585027 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
TMEM199-209ENST00000585027 ANP32CO43423 234 aa13.01□□□□□ -0.33
TMEM199-209ENST00000585027 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
TMEM199-209ENST00000585027 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
TMEM199-209ENST00000585027 LARGE2Q8N3Y3 721 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms