RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 CNKSR1Q969H4 720 aa21.85■■□□□ 1.09
ITGB4-211ENST00000584374 HYPKQ9NX55 129 aa21.85■■□□□ 1.09
ITGB4-211ENST00000584374 SBF1O95248 1867 aa21.84■■□□□ 1.09
ITGB4-211ENST00000584374 NPR1P16066 1061 aa21.84■■□□□ 1.09
ITGB4-211ENST00000584374 TCIRG1Q13488 830 aa21.84■■□□□ 1.09
ITGB4-211ENST00000584374 NLRP10Q86W26 655 aa21.84■■□□□ 1.09
ITGB4-211ENST00000584374 CHMP4AQ9BY43 222 aa21.84■■□□□ 1.09
ITGB4-211ENST00000584374 C21orf2O43822 256 aa21.83■■□□□ 1.09
ITGB4-211ENST00000584374 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.09
ITGB4-211ENST00000584374 HSP90AB3PQ58FF7 597 aa21.83■■□□□ 1.09
ITGB4-211ENST00000584374 C3orf67Q6ZVT6 689 aa21.83■■□□□ 1.09
ITGB4-211ENST00000584374 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.09
ITGB4-211ENST00000584374 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.09
ITGB4-211ENST00000584374 GTF2E1P29083 439 aaPredicted RBP21.82■■□□□ 1.08
ITGB4-211ENST00000584374 ANKRD13DQ6ZTN6 518 aa21.82■■□□□ 1.08
ITGB4-211ENST00000584374 PPP1R42Q7Z4L9 355 aa21.82■■□□□ 1.08
ITGB4-211ENST00000584374 CACNA1SQ13698 1873 aa21.81■■□□□ 1.08
ITGB4-211ENST00000584374 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
ITGB4-211ENST00000584374 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
ITGB4-211ENST00000584374 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
ITGB4-211ENST00000584374 RNF181Q9P0P0 153 aa21.81■■□□□ 1.08
ITGB4-211ENST00000584374 ZNF219Q9P2Y4 722 aaPredicted RBP21.81■■□□□ 1.08
ITGB4-211ENST00000584374 SNED1Q8TER0 1413 aa21.8■■□□□ 1.08
ITGB4-211ENST00000584374 SLC10A5Q5PT55 438 aa21.8■■□□□ 1.08
ITGB4-211ENST00000584374 ZNF526Q8TF50 670 aaPredicted RBP21.8■■□□□ 1.08
ITGB4-211ENST00000584374 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
ITGB4-211ENST00000584374 HOXA10P31260 410 aaPredicted RBP21.79■■□□□ 1.08
ITGB4-211ENST00000584374 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
ITGB4-211ENST00000584374 TWISTNBQ3B726 338 aaPredicted RBP21.79■■□□□ 1.08
ITGB4-211ENST00000584374 CCDC30Q5VVM6 783 aa21.79■■□□□ 1.08
ITGB4-211ENST00000584374 TRMT2AQ8IZ69 625 aaKnown RBP21.79■■□□□ 1.08
ITGB4-211ENST00000584374 SYNE4Q8N205 404 aa21.79■■□□□ 1.08
ITGB4-211ENST00000584374 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
ITGB4-211ENST00000584374 CT47B1P0C2W7 299 aaPredicted RBP21.78■■□□□ 1.08
ITGB4-211ENST00000584374 LMNB1P20700 586 aa21.78■■□□□ 1.08
ITGB4-211ENST00000584374 OLFM4Q6UX06 510 aa21.78■■□□□ 1.08
ITGB4-211ENST00000584374 GPBP1L1Q9HC44 474 aaPredicted RBP21.78■■□□□ 1.08
ITGB4-211ENST00000584374 ATP5J2-PTCD1G3V325 749 aa21.76■■□□□ 1.07
ITGB4-211ENST00000584374 SLC51AQ86UW1 340 aa21.76■■□□□ 1.07
ITGB4-211ENST00000584374 ZNF428Q96B54 188 aa21.76■■□□□ 1.07
ITGB4-211ENST00000584374 LAMB2P55268 1798 aa21.75■■□□□ 1.07
ITGB4-211ENST00000584374 TCERG1O14776 1098 aaKnown RBP21.75■■□□□ 1.07
ITGB4-211ENST00000584374 TRIM28Q13263 835 aaKnown RBP21.75■■□□□ 1.07
ITGB4-211ENST00000584374 TRMT112Q9UI30 125 aaKnown RBP21.75■■□□□ 1.07
ITGB4-211ENST00000584374 SH3TC1Q8TE82 1336 aa21.75■■□□□ 1.07
ITGB4-211ENST00000584374 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
ITGB4-211ENST00000584374 KIF3CO14782 793 aa21.74■■□□□ 1.07
ITGB4-211ENST00000584374 VAMP4O75379 141 aa21.74■■□□□ 1.07
ITGB4-211ENST00000584374 HCLS1P14317 486 aaPredicted RBP21.74■■□□□ 1.07
ITGB4-211ENST00000584374 ALDH1B1P30837 517 aa21.74■■□□□ 1.07
ITGB4-211ENST00000584374 SOGA3Q5TF21 947 aa21.74■■□□□ 1.07
ITGB4-211ENST00000584374 TAOK3Q9H2K8 898 aa21.74■■□□□ 1.07
ITGB4-211ENST00000584374 DDX60Q8IY21 1712 aaKnown RBP21.74■■□□□ 1.07
ITGB4-211ENST00000584374 ZC3H4Q9UPT8 1303 aaKnown RBP21.74■■□□□ 1.07
ITGB4-211ENST00000584374 CCDC93Q567U6 631 aa21.73■■□□□ 1.07
ITGB4-211ENST00000584374 G2E3Q7L622 706 aa21.73■■□□□ 1.07
ITGB4-211ENST00000584374 RIC3Q7Z5B4 369 aa21.73■■□□□ 1.07
ITGB4-211ENST00000584374 RPGRQ92834 1020 aaKnown RBP21.73■■□□□ 1.07
ITGB4-211ENST00000584374 NLRP3Q96P20 1036 aa21.73■■□□□ 1.07
ITGB4-211ENST00000584374 CRAMP1Q96RY5 1269 aa21.73■■□□□ 1.07
ITGB4-211ENST00000584374 C1QTNF8P60827 252 aa21.72■■□□□ 1.07
ITGB4-211ENST00000584374 STK31Q9BXU1 1019 aa21.72■■□□□ 1.07
ITGB4-211ENST00000584374 FAM89AQ96GI7 184 aa21.71■■□□□ 1.07
ITGB4-211ENST00000584374 NMRK2Q9NPI5 230 aa21.71■■□□□ 1.07
ITGB4-211ENST00000584374 CCDC88AQ3V6T2 1871 aa21.71■■□□□ 1.07
ITGB4-211ENST00000584374 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
ITGB4-211ENST00000584374 MYD88Q99836 296 aa21.7■■□□□ 1.06
ITGB4-211ENST00000584374 METTL22Q9BUU2 404 aaPredicted RBP21.7■■□□□ 1.06
ITGB4-211ENST00000584374 ABCC4O15439 1325 aa21.7■■□□□ 1.06
ITGB4-211ENST00000584374 DICER1Q9UPY3 1922 aaKnown RBP21.69■■□□□ 1.06
ITGB4-211ENST00000584374 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
ITGB4-211ENST00000584374 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
ITGB4-211ENST00000584374 KSR2Q6VAB6 950 aa21.69■■□□□ 1.06
ITGB4-211ENST00000584374 MAP3K2Q9Y2U5 619 aa21.69■■□□□ 1.06
ITGB4-211ENST00000584374 COL4A1P02462 1669 aa21.69■■□□□ 1.06
ITGB4-211ENST00000584374 PI4KAP2A4QPH2 592 aa21.68■■□□□ 1.06
ITGB4-211ENST00000584374 DDX58O95786 925 aaKnown RBP21.68■■□□□ 1.06
ITGB4-211ENST00000584374 PI4KAP1Q8N8J0 262 aa21.68■■□□□ 1.06
ITGB4-211ENST00000584374 PPEF1O14829 653 aaPredicted RBP21.67■■□□□ 1.06
ITGB4-211ENST00000584374 IGKV5-2P06315 115 aa21.67■■□□□ 1.06
ITGB4-211ENST00000584374 RTKN2Q8IZC4 609 aa21.67■■□□□ 1.06
ITGB4-211ENST00000584374 CCDC191Q8NCU4 936 aa21.67■■□□□ 1.06
ITGB4-211ENST00000584374 FLIIQ13045 1269 aa21.66■■□□□ 1.06
ITGB4-211ENST00000584374 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-211ENST00000584374 ZBTB38Q8NAP3 1195 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-211ENST00000584374 ZNF277Q9NRM2 450 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-211ENST00000584374 RCAN3Q9UKA8 241 aa21.66■■□□□ 1.06
ITGB4-211ENST00000584374 COL4A5P29400 1685 aa21.66■■□□□ 1.06
ITGB4-211ENST00000584374 KDM2BQ8NHM5 1336 aa21.65■■□□□ 1.06
ITGB4-211ENST00000584374 GLTPD2A6NH11 291 aa21.65■■□□□ 1.06
ITGB4-211ENST00000584374 SF3B3Q15393 1217 aaKnown RBP21.65■■□□□ 1.06
ITGB4-211ENST00000584374 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
ITGB4-211ENST00000584374 CC2D2BQ6DHV5 1058 aa21.65■■□□□ 1.06
ITGB4-211ENST00000584374 PSMD1Q99460 953 aa21.65■■□□□ 1.06
ITGB4-211ENST00000584374 SMC4Q9NTJ3 1288 aa21.65■■□□□ 1.06
ITGB4-211ENST00000584374 IRS4O14654 1257 aaPredicted RBP21.64■■□□□ 1.05
ITGB4-211ENST00000584374 CWC25Q9NXE8 425 aaPredicted RBP21.64■■□□□ 1.05
ITGB4-211ENST00000584374 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
ITGB4-211ENST00000584374 PCCAP05165 728 aaPredicted RBP21.63■■□□□ 1.05
ITGB4-211ENST00000584374 GRAPQ13588 217 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms