RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 DDR1Q08345 913 aa7.32□□□□□ -1.24
VAPA-207ENST00000583879 COL13A1Q5TAT6 717 aaPredicted RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 ZNF530Q6P9A1 599 aaPredicted RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 INTS5Q6P9B9 1019 aaKnown RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
VAPA-207ENST00000583879 ZFRQ96KR1 1074 aaKnown RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 RNF181Q9P0P0 153 aa7.32□□□□□ -1.24
VAPA-207ENST00000583879 KIAA1468Q9P260 1216 aa7.32□□□□□ -1.24
VAPA-207ENST00000583879 SRP68Q9UHB9 627 aaKnown RBP7.32□□□□□ -1.24
VAPA-207ENST00000583879 USP42Q9H9J4 1324 aaKnown RBP7.31□□□□□ -1.24
VAPA-207ENST00000583879 POLRMTO00411 1230 aaKnown RBP7.31□□□□□ -1.24
VAPA-207ENST00000583879 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
VAPA-207ENST00000583879 PKD1L3Q7Z443 1732 aa7.31□□□□□ -1.24
VAPA-207ENST00000583879 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
VAPA-207ENST00000583879 ITGB4P16144 1822 aa7.31□□□□□ -1.24
VAPA-207ENST00000583879 ZPR1O75312 459 aa7.3□□□□□ -1.24
VAPA-207ENST00000583879 USPL1Q5W0Q7 1092 aa7.3□□□□□ -1.24
VAPA-207ENST00000583879 SMC1BQ8NDV3 1235 aa7.3□□□□□ -1.24
VAPA-207ENST00000583879 POLR3GLQ9BT43 218 aa7.3□□□□□ -1.24
VAPA-207ENST00000583879 PANK3Q9H999 370 aa7.3□□□□□ -1.24
VAPA-207ENST00000583879 WBP1LQ9NX94 342 aa7.3□□□□□ -1.24
VAPA-207ENST00000583879 KDM6AO15550 1401 aaPredicted RBP7.29□□□□□ -1.24
VAPA-207ENST00000583879 GLTPD2A6NH11 291 aa7.29□□□□□ -1.24
VAPA-207ENST00000583879 VEGFAP15692 232 aaPredicted RBP7.29□□□□□ -1.24
VAPA-207ENST00000583879 SULT6B1Q6IMI4 303 aa7.29□□□□□ -1.24
VAPA-207ENST00000583879 AEBP1Q8IUX7 1158 aa7.29□□□□□ -1.24
VAPA-207ENST00000583879 DNAJC10Q8IXB1 793 aa7.29□□□□□ -1.24
VAPA-207ENST00000583879 ZC3H4Q9UPT8 1303 aaKnown RBP7.28□□□□□ -1.24
VAPA-207ENST00000583879 KCPQ6ZWJ8 1503 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 SERPINB2P05120 415 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 CYP19A1P11511 503 aaPredicted RBP7.28□□□□□ -1.24
VAPA-207ENST00000583879 LMNB1P20700 586 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 NFIXQ14938 502 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 AKAP4Q5JQC9 854 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 MORC1Q86VD1 984 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 TNS4Q8IZW8 715 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 TTLL6Q8N841 843 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 LGR6Q9HBX8 967 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 SEPT9Q9UHD8 586 aaPredicted RBP7.28□□□□□ -1.24
VAPA-207ENST00000583879 NARFQ9UHQ1 456 aa7.28□□□□□ -1.24
VAPA-207ENST00000583879 C4AP0C0L4 1744 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 KIF13BQ9NQT8 1826 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 IL13P35225 146 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 PRELPP51888 382 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 RASSF7Q02833 373 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 C6orf132Q5T0Z8 1188 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 PAXIP1Q6ZW49 1069 aaPredicted RBP7.27□□□□□ -1.25
VAPA-207ENST00000583879 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 EPAS1Q99814 870 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 SLC52A2Q9HAB3 445 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 N4BP2Q86UW6 1770 aaPredicted RBP7.27□□□□□ -1.25
VAPA-207ENST00000583879 KIF20BQ96Q89 1820 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 KIAA1551Q9HCM1 1747 aa7.27□□□□□ -1.25
VAPA-207ENST00000583879 SOS1Q07889 1333 aaPredicted RBP7.27□□□□□ -1.25
VAPA-207ENST00000583879 ZNF831Q5JPB2 1677 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 POTECB2RU33 542 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 H0YIN7 160 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 RNMTO43148 476 aaKnown RBP7.26□□□□□ -1.25
VAPA-207ENST00000583879 SLC39A6Q13433 755 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 LAPTM4AQ15012 233 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 C2CD5Q86YS7 1000 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 VSIG10Q8N0Z9 540 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 LRCH3Q96II8 777 aa7.26□□□□□ -1.25
VAPA-207ENST00000583879 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.26□□□□□ -1.25
VAPA-207ENST00000583879 TSR3Q9UJK0 312 aaKnown RBP7.26□□□□□ -1.25
VAPA-207ENST00000583879 TRIM6-TRIM34B2RNG4 842 aa7.25□□□□□ -1.25
VAPA-207ENST00000583879 HSPA1AP0DMV8 641 aaKnown RBP7.25□□□□□ -1.25
VAPA-207ENST00000583879 HSPA1BP0DMV9 641 aaKnown RBP7.25□□□□□ -1.25
VAPA-207ENST00000583879 EIF4G2P78344 907 aaKnown RBP eCLIP7.25□□□□□ -1.25
VAPA-207ENST00000583879 ZBTB1Q9Y2K1 713 aa7.25□□□□□ -1.25
VAPA-207ENST00000583879 ANKRD26Q9UPS8 1709 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 NFKBIEO00221 500 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 STARD3NLO95772 234 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 CANXP27824 592 aaKnown RBP7.24□□□□□ -1.25
VAPA-207ENST00000583879 EIF5P55010 431 aaKnown RBP7.24□□□□□ -1.25
VAPA-207ENST00000583879 TRIM26Q12899 539 aaPredicted RBP7.24□□□□□ -1.25
VAPA-207ENST00000583879 MTHFSDQ2M296 383 aaKnown RBP7.24□□□□□ -1.25
VAPA-207ENST00000583879 ERFEQ4G0M1 354 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 BICDL1Q6ZP65 573 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 ERICH6Q7L0X2 663 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 BRIP1Q9BX63 1249 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 PDZRN3Q9UPQ7 1066 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 HPS5Q9UPZ3 1129 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 KNSTRNQ9Y448 316 aa7.24□□□□□ -1.25
VAPA-207ENST00000583879 COL15A1P39059 1388 aa7.23□□□□□ -1.25
VAPA-207ENST00000583879 A0A087WZG4 1122 aa7.23□□□□□ -1.25
VAPA-207ENST00000583879 C21orf2O43822 256 aa7.23□□□□□ -1.25
VAPA-207ENST00000583879 HMOX1P09601 288 aa7.23□□□□□ -1.25
VAPA-207ENST00000583879 HSPA5P11021 654 aaKnown RBP7.23□□□□□ -1.25
VAPA-207ENST00000583879 PDE6BP35913 854 aa7.23□□□□□ -1.25
VAPA-207ENST00000583879 ZNF622Q969S3 477 aaKnown RBP eCLIP7.23□□□□□ -1.253e-8■■■□□ 15.1
VAPA-207ENST00000583879 WDR90Q96KV7 1748 aa7.23□□□□□ -1.25
VAPA-207ENST00000583879 MYH14Q7Z406 1995 aaKnown RBP7.22□□□□□ -1.25
VAPA-207ENST00000583879 COL5A3P25940 1745 aaPredicted RBP7.22□□□□□ -1.25
VAPA-207ENST00000583879 TBC1D9BQ66K14 1250 aa7.22□□□□□ -1.25
VAPA-207ENST00000583879 TTC5Q8N0Z6 440 aa7.22□□□□□ -1.25
VAPA-207ENST00000583879 TEX13AQ9BXU3 409 aaPredicted RBP7.22□□□□□ -1.25
VAPA-207ENST00000583879 BRCA1P38398 1863 aaKnown RBP7.21□□□□□ -1.25
VAPA-207ENST00000583879 DPYSL4O14531 572 aa7.21□□□□□ -1.26
VAPA-207ENST00000583879 GFRA3O60609 400 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms