RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.53
UBBP4-201ENST00000583708 H7C1W4 665 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 NPHP1O15259 732 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 IGKV5-2P06315 115 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 TRIM27P14373 513 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 PDE6BP35913 854 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 TGFB2P61812 414 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 DDR1Q08345 913 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 AAMPQ13685 434 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
UBBP4-201ENST00000583708 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
UBBP4-201ENST00000583708 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 C4AP0C0L4 1744 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
UBBP4-201ENST00000583708 F6X3S4 739 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 NTSR2O95665 410 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 GNAI3P08754 354 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 GPTP24298 496 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 SUSD4Q5VX71 490 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 SLC4A10Q6U841 1118 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
UBBP4-201ENST00000583708 UTYO14607 1347 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
UBBP4-201ENST00000583708 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 GRM8O00222 908 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 PLA2G12BQ9BX93 195 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 NUP98P52948 1817 aa11.74□□□□□ -0.53
UBBP4-201ENST00000583708 PDE8AO60658 829 aa11.73□□□□□ -0.53
UBBP4-201ENST00000583708 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
UBBP4-201ENST00000583708 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
UBBP4-201ENST00000583708 H0YIN7 160 aa11.72□□□□□ -0.53
UBBP4-201ENST00000583708 IRS4O14654 1257 aaPredicted RBP11.72□□□□□ -0.53
UBBP4-201ENST00000583708 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
UBBP4-201ENST00000583708 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
UBBP4-201ENST00000583708 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
UBBP4-201ENST00000583708 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
UBBP4-201ENST00000583708 ALDH1B1P30837 517 aa11.71□□□□□ -0.53
UBBP4-201ENST00000583708 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
UBBP4-201ENST00000583708 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
UBBP4-201ENST00000583708 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-201ENST00000583708 NPR1P16066 1061 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 CASP7P55210 303 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 MVPQ14764 893 aaKnown RBP11.7□□□□□ -0.54
UBBP4-201ENST00000583708 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 CCDC152Q4G0S7 254 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 GRIPAP1Q4V328 841 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 TMEM57Q8N5G2 664 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
UBBP4-201ENST00000583708 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 RTL9Q8NET4 1388 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 ZBTB7BO15156 539 aaPredicted RBP11.69□□□□□ -0.54
UBBP4-201ENST00000583708 CSF1RP07333 972 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 UBE3BQ7Z3V4 1068 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 CLUAP1Q96AJ1 413 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 MASTLQ96GX5 879 aa11.69□□□□□ -0.54
UBBP4-201ENST00000583708 BBOX1O75936 387 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 GNAI2P04899 355 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 SRGNP10124 158 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
UBBP4-201ENST00000583708 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
UBBP4-201ENST00000583708 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
UBBP4-201ENST00000583708 LRP5O75197 1615 aa11.68□□□□□ -0.54
UBBP4-201ENST00000583708 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 NBPF7P0C2Y1 421 aaPredicted RBP11.67□□□□□ -0.54
UBBP4-201ENST00000583708 CTSWP56202 376 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 SOGA3Q5TF21 947 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
UBBP4-201ENST00000583708 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 PANK1Q8TE04 598 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 SYT17Q9BSW7 474 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
UBBP4-201ENST00000583708 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
UBBP4-201ENST00000583708 PLIN1O60240 522 aa11.66□□□□□ -0.54
UBBP4-201ENST00000583708 RLBP1P12271 317 aa11.66□□□□□ -0.54
UBBP4-201ENST00000583708 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
UBBP4-201ENST00000583708 MTX1Q13505 466 aa11.66□□□□□ -0.54
UBBP4-201ENST00000583708 RPAP2Q8IXW5 612 aaPredicted RBP11.66□□□□□ -0.54
UBBP4-201ENST00000583708 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
UBBP4-201ENST00000583708 CDC5LQ99459 802 aaKnown RBP11.66□□□□□ -0.54
UBBP4-201ENST00000583708 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms