RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 KCNQ4P56696 695 aa8.99□□□□□ -0.97
SMCHD1-208ENST00000583344 BTLAQ7Z6A9 289 aa8.99□□□□□ -0.97
SMCHD1-208ENST00000583344 ANKMY2Q8IV38 441 aa8.99□□□□□ -0.97
SMCHD1-208ENST00000583344 TNFRSF25Q93038 417 aa8.99□□□□□ -0.97
SMCHD1-208ENST00000583344 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
SMCHD1-208ENST00000583344 STARD13Q9Y3M8 1113 aa8.99□□□□□ -0.97
SMCHD1-208ENST00000583344 M0R082 166 aa8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 ALBP02768 609 aa8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 ADH7P40394 386 aa8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 ZNF417Q8TAU3 575 aa8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 BHMTQ93088 406 aa8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 ZNF587Q96SQ5 575 aaPredicted RBP8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
SMCHD1-208ENST00000583344 NEUROD1Q13562 356 aa8.97□□□□□ -0.97
SMCHD1-208ENST00000583344 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
SMCHD1-208ENST00000583344 ARXQ96QS3 562 aa8.97□□□□□ -0.97
SMCHD1-208ENST00000583344 FURINP09958 794 aa8.96□□□□□ -0.98
SMCHD1-208ENST00000583344 IGFBP4P22692 258 aa8.96□□□□□ -0.98
SMCHD1-208ENST00000583344 TBC1D8BQ0IIM8 1120 aa8.96□□□□□ -0.98
SMCHD1-208ENST00000583344 RTN1Q16799 776 aa8.96□□□□□ -0.98
SMCHD1-208ENST00000583344 BCS1LQ9Y276 419 aa8.96□□□□□ -0.98
SMCHD1-208ENST00000583344 K7ELQ4 463 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-208ENST00000583344 COL9A3Q14050 684 aaPredicted RBP8.95□□□□□ -0.98
SMCHD1-208ENST00000583344 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
SMCHD1-208ENST00000583344 FAM229AH3BQW9 127 aa8.94□□□□□ -0.98
SMCHD1-208ENST00000583344 HIF1AQ16665 826 aa8.94□□□□□ -0.98
SMCHD1-208ENST00000583344 MICALL1Q8N3F8 863 aa8.94□□□□□ -0.98
SMCHD1-208ENST00000583344 IGFLR1Q9H665 355 aa8.94□□□□□ -0.98
SMCHD1-208ENST00000583344 KLK14Q9P0G3 267 aa8.94□□□□□ -0.98
SMCHD1-208ENST00000583344 TGFBR3LH3BV60 316 aa8.93□□□□□ -0.98
SMCHD1-208ENST00000583344 SPATA31C1P0DKV0 1188 aa8.93□□□□□ -0.98
SMCHD1-208ENST00000583344 IER5Q5VY09 327 aa8.93□□□□□ -0.98
SMCHD1-208ENST00000583344 UBE2OQ9C0C9 1292 aaKnown RBP8.93□□□□□ -0.98
SMCHD1-208ENST00000583344 GRNP28799 593 aaKnown RBP8.92□□□□□ -0.98
SMCHD1-208ENST00000583344 DMGDHQ9UI17 866 aaKnown RBP8.92□□□□□ -0.98
SMCHD1-208ENST00000583344 NID1P14543 1247 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 RFX1P22670 979 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 WEE1P30291 646 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 DGKZQ13574 1117 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 GSX2Q9BZM3 304 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 QTRT2Q9H974 415 aaKnown RBP8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 PRDM6Q9NQX0 595 aa8.91□□□□□ -0.98
SMCHD1-208ENST00000583344 SPDYE3A6NKU9 549 aa8.9□□□□□ -0.98
SMCHD1-208ENST00000583344 NFKB1P19838 968 aa8.9□□□□□ -0.98
SMCHD1-208ENST00000583344 PRRT3Q5FWE3 981 aa8.9□□□□□ -0.98
SMCHD1-208ENST00000583344 SLC6A14Q9UN76 642 aa8.9□□□□□ -0.98
SMCHD1-208ENST00000583344 IDH3AP50213 366 aa8.89□□□□□ -0.99
SMCHD1-208ENST00000583344 DOC2BQ14184 412 aa8.89□□□□□ -0.99
SMCHD1-208ENST00000583344 FAM200AQ8TCP9 573 aa8.89□□□□□ -0.99
SMCHD1-208ENST00000583344 PNMA5Q96PV4 448 aa8.89□□□□□ -0.99
SMCHD1-208ENST00000583344 FOXO3O43524 673 aa8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 CCINQ13939 588 aa8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 NUDT8Q8WV74 236 aa8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 DNAJB12Q9NXW2 375 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 NAGPAQ9UK23 515 aa8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 NOVA2Q9UNW9 492 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.88□□□□□ -0.99
SMCHD1-208ENST00000583344 LILRB5O75023 590 aa8.87□□□□□ -0.99
SMCHD1-208ENST00000583344 INPP5BP32019 993 aa8.87□□□□□ -0.99
SMCHD1-208ENST00000583344 GATA4P43694 442 aa8.87□□□□□ -0.99
SMCHD1-208ENST00000583344 JPH1Q9HDC5 661 aaPredicted RBP8.87□□□□□ -0.99
SMCHD1-208ENST00000583344 GRIK4Q16099 956 aa8.86□□□□□ -0.99
SMCHD1-208ENST00000583344 KRT25Q7Z3Z0 450 aa8.86□□□□□ -0.99
SMCHD1-208ENST00000583344 APBA3O96018 575 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 EPB42P16452 691 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 PSAPL1Q6NUJ1 521 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 EFCC1Q9HA90 598 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 ZFATQ9P243 1243 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 LRFN2Q9ULH4 789 aa8.85□□□□□ -0.99
SMCHD1-208ENST00000583344 MICAL2O94851 1124 aa8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 ARSDP51689 593 aa8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 FKBP5Q13451 457 aaPredicted RBP8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 TRAPPC3LQ5T215 181 aa8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 MYO19Q96H55 970 aa8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 USP20Q9Y2K6 914 aa8.84□□□□□ -0.99
SMCHD1-208ENST00000583344 ITGB7P26010 798 aa8.83□□□□□ -1
SMCHD1-208ENST00000583344 C11orf91Q3C1V1 193 aa8.83□□□□□ -1
SMCHD1-208ENST00000583344 PRMT3O60678 531 aa8.82□□□□□ -1
SMCHD1-208ENST00000583344 TARSP26639 723 aaKnown RBP8.82□□□□□ -1
SMCHD1-208ENST00000583344 AFF1P51825 1210 aaKnown RBP8.82□□□□□ -1
SMCHD1-208ENST00000583344 FAM35AQ86V20 835 aa8.82□□□□□ -1
SMCHD1-208ENST00000583344 STK32AQ8WU08 396 aa8.82□□□□□ -1
SMCHD1-208ENST00000583344 IFT43Q96FT9 208 aa8.82□□□□□ -1
SMCHD1-208ENST00000583344 SEMA6BQ9H3T3 888 aa8.82□□□□□ -1
SMCHD1-208ENST00000583344 A0A0A0MRY4 1105 aa8.81□□□□□ -1
SMCHD1-208ENST00000583344 OPLAHO14841 1288 aa8.81□□□□□ -1
SMCHD1-208ENST00000583344 SASH3O75995 380 aa8.81□□□□□ -1
SMCHD1-208ENST00000583344 CPB1P15086 417 aa8.81□□□□□ -1
SMCHD1-208ENST00000583344 MLLT1Q03111 559 aaPredicted RBP8.81□□□□□ -1
SMCHD1-208ENST00000583344 TPSG1Q9NRR2 321 aa8.81□□□□□ -1
SMCHD1-208ENST00000583344 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
SMCHD1-208ENST00000583344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
SMCHD1-208ENST00000583344 ZBTB42B2RXF5 422 aa8.8□□□□□ -1
SMCHD1-208ENST00000583344 RGS9O75916 674 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms