RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
TSEN54-208ENST00000583173 ST5P78524 1137 aa27.59■■■□□ 2.01
TSEN54-208ENST00000583173 PTPRCP08575 1304 aa27.59■■■□□ 2.01
TSEN54-208ENST00000583173 RNF123Q5XPI4 1314 aa27.59■■■□□ 2.01
TSEN54-208ENST00000583173 CHRNA5P30532 468 aa27.58■■■□□ 2.01
TSEN54-208ENST00000583173 BEND3Q5T5X7 828 aa27.58■■■□□ 2.01
TSEN54-208ENST00000583173 TRMT112Q9UI30 125 aaKnown RBP27.58■■■□□ 2.01
TSEN54-208ENST00000583173 NEURL1BA8MQ27 555 aa27.57■■■□□ 2
TSEN54-208ENST00000583173 BCAR3O75815 825 aa27.57■■■□□ 2
TSEN54-208ENST00000583173 PDE6BP35913 854 aa27.57■■■□□ 2
TSEN54-208ENST00000583173 NOB1Q9ULX3 412 aaKnown RBP27.57■■■□□ 2
TSEN54-208ENST00000583173 PDZRN3Q9UPQ7 1066 aa27.57■■■□□ 2
TSEN54-208ENST00000583173 KIAA1551Q9HCM1 1747 aa27.57■■■□□ 2
TSEN54-208ENST00000583173 ANKRD36CQ5JPF3 1778 aa27.57■■■□□ 2
TSEN54-208ENST00000583173 CWF19L2Q2TBE0 894 aaKnown RBP27.56■■■□□ 2
TSEN54-208ENST00000583173 LINS1Q8NG48 757 aa27.56■■■□□ 2
TSEN54-208ENST00000583173 CWC25Q9NXE8 425 aaPredicted RBP27.56■■■□□ 2
TSEN54-208ENST00000583173 ABCC12Q96J65 1359 aa27.56■■■□□ 2
TSEN54-208ENST00000583173 GTF2E1P29083 439 aaPredicted RBP27.55■■■□□ 2
TSEN54-208ENST00000583173 NEXNQ0ZGT2 675 aa27.55■■■□□ 2
TSEN54-208ENST00000583173 ZBTB38Q8NAP3 1195 aaPredicted RBP27.55■■■□□ 2
TSEN54-208ENST00000583173 SRGNP10124 158 aa27.54■■■□□ 2
TSEN54-208ENST00000583173 RIC1Q4ADV7 1423 aa27.54■■■□□ 2
TSEN54-208ENST00000583173 C2CD5Q86YS7 1000 aa27.54■■■□□ 2
TSEN54-208ENST00000583173 ANKRD31Q8N7Z5 1873 aa27.54■■■□□ 2
TSEN54-208ENST00000583173 ARHGAP45Q92619 1136 aa27.54■■■□□ 2
TSEN54-208ENST00000583173 FAM89AQ96GI7 184 aa27.54■■■□□ 2
TSEN54-208ENST00000583173 YTHDC1Q96MU7 727 aaKnown RBP27.54■■■□□ 2
TSEN54-208ENST00000583173 SH3TC1Q8TE82 1336 aa27.53■■■□□ 2
TSEN54-208ENST00000583173 H0YIN7 160 aa27.53■■■□□ 2
TSEN54-208ENST00000583173 H7C1W4 665 aa27.53■■■□□ 2
TSEN54-208ENST00000583173 NPHP1O15259 732 aa27.53■■■□□ 2
TSEN54-208ENST00000583173 PCCAP05165 728 aaPredicted RBP27.53■■■□□ 2
TSEN54-208ENST00000583173 CRY2Q49AN0 593 aa27.53■■■□□ 2
TSEN54-208ENST00000583173 C3orf67Q6ZVT6 689 aa27.53■■■□□ 2
TSEN54-208ENST00000583173 GCKRQ14397 625 aa27.52■■■□□ 2
TSEN54-208ENST00000583173 HCLS1P14317 486 aaPredicted RBP27.5■■□□□ 1.99
TSEN54-208ENST00000583173 CASP7P55210 303 aa27.5■■□□□ 1.99
TSEN54-208ENST00000583173 PIM2Q9P1W9 311 aa27.5■■□□□ 1.99
TSEN54-208ENST00000583173 ALDH1L1O75891 902 aa27.49■■□□□ 1.99
TSEN54-208ENST00000583173 STYK1Q6J9G0 422 aa27.49■■□□□ 1.99
TSEN54-208ENST00000583173 JARID2Q92833 1246 aaPredicted RBP27.49■■□□□ 1.99
TSEN54-208ENST00000583173 N4BP2Q86UW6 1770 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-208ENST00000583173 IRS4O14654 1257 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-208ENST00000583173 YBX3P16989 372 aaKnown RBP eCLIP27.48■■□□□ 1.99
TSEN54-208ENST00000583173 HOXA10P31260 410 aaPredicted RBP27.48■■□□□ 1.99
TSEN54-208ENST00000583173 MASTLQ96GX5 879 aa27.48■■□□□ 1.99
TSEN54-208ENST00000583173 NLRP3Q96P20 1036 aa27.48■■□□□ 1.99
TSEN54-208ENST00000583173 KIF16BQ96L93 1317 aa27.47■■□□□ 1.99
TSEN54-208ENST00000583173 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
TSEN54-208ENST00000583173 API5Q9BZZ5 524 aaKnown RBP27.47■■□□□ 1.99
TSEN54-208ENST00000583173 CDHR2Q9BYE9 1310 aa27.46■■□□□ 1.99
TSEN54-208ENST00000583173 NPR1P16066 1061 aa27.46■■□□□ 1.99
TSEN54-208ENST00000583173 SF3B3Q15393 1217 aaKnown RBP27.46■■□□□ 1.99
TSEN54-208ENST00000583173 RTL5Q5HYW3 569 aaPredicted RBP27.46■■□□□ 1.99
TSEN54-208ENST00000583173 SRCIN1Q9C0H9 1055 aa27.46■■□□□ 1.99
TSEN54-208ENST00000583173 IPO8O15397 1037 aaKnown RBP27.45■■□□□ 1.98
TSEN54-208ENST00000583173 DALRD3Q5D0E6 543 aaKnown RBP27.44■■□□□ 1.98
TSEN54-208ENST00000583173 TTLL6Q8N841 843 aa27.44■■□□□ 1.98
TSEN54-208ENST00000583173 ZNF622Q969S3 477 aaKnown RBP eCLIP27.44■■□□□ 1.98
TSEN54-208ENST00000583173 GOLGB1Q14789 3259 aaKnown RBP27.43■■□□□ 1.98
TSEN54-208ENST00000583173 TRIM27P14373 513 aa27.43■■□□□ 1.98
TSEN54-208ENST00000583173 ATF7IPQ6VMQ6 1270 aa27.43■■□□□ 1.98
TSEN54-208ENST00000583173 PLA2G12BQ9BX93 195 aa27.43■■□□□ 1.98
TSEN54-208ENST00000583173 TNNQ9UQP3 1299 aa27.43■■□□□ 1.98
TSEN54-208ENST00000583173 TNRC6CQ9HCJ0 1690 aaKnown RBP27.43■■□□□ 1.98
TSEN54-208ENST00000583173 PDE8AO60658 829 aa27.42■■□□□ 1.98
TSEN54-208ENST00000583173 CNKSR1Q969H4 720 aa27.42■■□□□ 1.98
TSEN54-208ENST00000583173 CRAMP1Q96RY5 1269 aa27.42■■□□□ 1.98
TSEN54-208ENST00000583173 RCAN3Q9UKA8 241 aa27.42■■□□□ 1.98
TSEN54-208ENST00000583173 WWC3Q9ULE0 1092 aa27.42■■□□□ 1.98
TSEN54-208ENST00000583173 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
TSEN54-208ENST00000583173 UTYO14607 1347 aa27.41■■□□□ 1.98
TSEN54-208ENST00000583173 GPR162Q16538 588 aa27.41■■□□□ 1.98
TSEN54-208ENST00000583173 UBE3BQ7Z3V4 1068 aa27.41■■□□□ 1.98
TSEN54-208ENST00000583173 C7orf43Q8WVR3 580 aa27.41■■□□□ 1.98
TSEN54-208ENST00000583173 ABCC4O15439 1325 aa27.41■■□□□ 1.98
TSEN54-208ENST00000583173 GRM8O00222 908 aa27.4■■□□□ 1.98
TSEN54-208ENST00000583173 HSP90B1P14625 803 aaKnown RBP27.4■■□□□ 1.98
TSEN54-208ENST00000583173 INTS3Q68E01 1043 aaKnown RBP27.4■■□□□ 1.98
TSEN54-208ENST00000583173 FRAT1Q92837 279 aaPredicted RBP27.4■■□□□ 1.98
TSEN54-208ENST00000583173 USP44Q9H0E7 712 aa27.4■■□□□ 1.98
TSEN54-208ENST00000583173 BCS1LQ9Y276 419 aa27.4■■□□□ 1.98
TSEN54-208ENST00000583173 COL11A2P13942 1736 aaPredicted RBP27.4■■□□□ 1.98
TSEN54-208ENST00000583173 ALDH1B1P30837 517 aa27.39■■□□□ 1.98
TSEN54-208ENST00000583173 CCT4P50991 539 aaKnown RBP27.39■■□□□ 1.98
TSEN54-208ENST00000583173 ZKSCAN2Q63HK3 967 aa27.39■■□□□ 1.98
TSEN54-208ENST00000583173 DLEC1Q9Y238 1755 aa27.38■■□□□ 1.97
TSEN54-208ENST00000583173 RBM17Q96I25 401 aaKnown RBP27.38■■□□□ 1.97
TSEN54-208ENST00000583173 DDX60Q8IY21 1712 aaKnown RBP27.38■■□□□ 1.97
TSEN54-208ENST00000583173 CSF1RP07333 972 aa27.37■■□□□ 1.97
TSEN54-208ENST00000583173 NBPF7P0C2Y1 421 aaPredicted RBP27.37■■□□□ 1.97
TSEN54-208ENST00000583173 TTLL11Q8NHH1 800 aa27.37■■□□□ 1.97
TSEN54-208ENST00000583173 GRIN3BO60391 1043 aa27.36■■□□□ 1.97
TSEN54-208ENST00000583173 FOXO4P98177 505 aa27.36■■□□□ 1.97
TSEN54-208ENST00000583173 PRPF40BQ6NWY9 871 aaKnown RBP27.36■■□□□ 1.97
TSEN54-208ENST00000583173 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
TSEN54-208ENST00000583173 RPGRQ92834 1020 aaKnown RBP27.36■■□□□ 1.97
TSEN54-208ENST00000583173 KAZALD1Q96I82 304 aa27.35■■□□□ 1.97
TSEN54-208ENST00000583173 C9orf78Q9NZ63 289 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms