RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
CACNB1-211ENST00000582877 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
CACNB1-211ENST00000582877 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
CACNB1-211ENST00000582877 SNED1Q8TER0 1413 aa12.95□□□□□ -0.34
CACNB1-211ENST00000582877 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
CACNB1-211ENST00000582877 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
CACNB1-211ENST00000582877 SLC51AQ86UW1 340 aa12.94□□□□□ -0.34
CACNB1-211ENST00000582877 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
CACNB1-211ENST00000582877 ELL2O00472 640 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-211ENST00000582877 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
CACNB1-211ENST00000582877 RPGRQ92834 1020 aaKnown RBP12.93□□□□□ -0.34
CACNB1-211ENST00000582877 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
CACNB1-211ENST00000582877 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
CACNB1-211ENST00000582877 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
CACNB1-211ENST00000582877 GLTPD2A6NH11 291 aa12.92□□□□□ -0.34
CACNB1-211ENST00000582877 TOMM70O94826 608 aa12.92□□□□□ -0.34
CACNB1-211ENST00000582877 HSPA6P17066 643 aa12.92□□□□□ -0.34
CACNB1-211ENST00000582877 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
CACNB1-211ENST00000582877 NLRP10Q86W26 655 aa12.92□□□□□ -0.34
CACNB1-211ENST00000582877 C16orf71Q8IYS4 520 aaPredicted RBP12.92□□□□□ -0.34
CACNB1-211ENST00000582877 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
CACNB1-211ENST00000582877 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACNB1-211ENST00000582877 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 C8orf58Q8NAV2 365 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 HYPKQ9NX55 129 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 COL4A5P29400 1685 aa12.91□□□□□ -0.34
CACNB1-211ENST00000582877 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
CACNB1-211ENST00000582877 COL4A1P02462 1669 aa12.9□□□□□ -0.34
CACNB1-211ENST00000582877 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 CCDC27Q2M243 656 aa12.9□□□□□ -0.34
CACNB1-211ENST00000582877 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
CACNB1-211ENST00000582877 TSPYL6Q8N831 410 aa12.9□□□□□ -0.34
CACNB1-211ENST00000582877 RBM46Q8TBY0 533 aaKnown RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 PHAXQ9H814 394 aaKnown RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 ZNF277Q9NRM2 450 aaPredicted RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 TRMT112Q9UI30 125 aaKnown RBP12.9□□□□□ -0.34
CACNB1-211ENST00000582877 ABCC4O15439 1325 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 TCERG1O14776 1098 aaKnown RBP12.89□□□□□ -0.35
CACNB1-211ENST00000582877 HCLS1P14317 486 aaPredicted RBP12.89□□□□□ -0.35
CACNB1-211ENST00000582877 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 SCN4AP35499 1836 aa12.89□□□□□ -0.35
CACNB1-211ENST00000582877 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
CACNB1-211ENST00000582877 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
CACNB1-211ENST00000582877 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
CACNB1-211ENST00000582877 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
CACNB1-211ENST00000582877 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
CACNB1-211ENST00000582877 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
CACNB1-211ENST00000582877 POTECB2RU33 542 aa12.87□□□□□ -0.35
CACNB1-211ENST00000582877 DDNO94850 711 aaPredicted RBP12.87□□□□□ -0.35
CACNB1-211ENST00000582877 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
CACNB1-211ENST00000582877 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
CACNB1-211ENST00000582877 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
CACNB1-211ENST00000582877 RIC3Q7Z5B4 369 aa12.87□□□□□ -0.35
CACNB1-211ENST00000582877 CACNA1FO60840 1977 aa12.87□□□□□ -0.35
CACNB1-211ENST00000582877 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 MYH3P11055 1940 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 SPEF2Q9C093 1822 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
CACNB1-211ENST00000582877 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 PSMD1Q99460 953 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 MYD88Q99836 296 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 IL16Q14005 1332 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
CACNB1-211ENST00000582877 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
CACNB1-211ENST00000582877 FSTL1Q12841 308 aa12.85□□□□□ -0.35
CACNB1-211ENST00000582877 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
CACNB1-211ENST00000582877 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
CACNB1-211ENST00000582877 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
CACNB1-211ENST00000582877 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
CACNB1-211ENST00000582877 APLP1P51693 650 aa12.84□□□□□ -0.35
CACNB1-211ENST00000582877 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
CACNB1-211ENST00000582877 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
CACNB1-211ENST00000582877 HTRA3P83110 453 aa12.83□□□□□ -0.36
CACNB1-211ENST00000582877 GRAPQ13588 217 aa12.83□□□□□ -0.36
CACNB1-211ENST00000582877 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
CACNB1-211ENST00000582877 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.36
CACNB1-211ENST00000582877 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.36
CACNB1-211ENST00000582877 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
CACNB1-211ENST00000582877 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
CACNB1-211ENST00000582877 FZD9O00144 591 aa12.82□□□□□ -0.36
CACNB1-211ENST00000582877 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
CACNB1-211ENST00000582877 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
CACNB1-211ENST00000582877 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
CACNB1-211ENST00000582877 AOC3Q16853 763 aa12.82□□□□□ -0.36
CACNB1-211ENST00000582877 G2E3Q7L622 706 aa12.82□□□□□ -0.36
CACNB1-211ENST00000582877 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
CACNB1-211ENST00000582877 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
CACNB1-211ENST00000582877 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
CACNB1-211ENST00000582877 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms