RNA–Protein interactions for RNA: ENST00000582812.5

NDEL1-215, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-215ENST00000582812 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-215ENST00000582812 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
NDEL1-215ENST00000582812 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
NDEL1-215ENST00000582812 ANKRD36CQ5JPF3 1778 aa12.03□□□□□ -0.48
NDEL1-215ENST00000582812 KIF6Q6ZMV9 814 aa12.03□□□□□ -0.48
NDEL1-215ENST00000582812 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
NDEL1-215ENST00000582812 TAF1DQ9H5J8 278 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-215ENST00000582812 NPHP1O15259 732 aa12.02□□□□□ -0.49
NDEL1-215ENST00000582812 ITGBL1O95965 494 aaPredicted RBP12.02□□□□□ -0.49
NDEL1-215ENST00000582812 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.49
NDEL1-215ENST00000582812 RIPK4P57078 832 aa12.02□□□□□ -0.49
NDEL1-215ENST00000582812 DDX21Q9NR30 783 aaKnown RBP eCLIP12.02□□□□□ -0.49
NDEL1-215ENST00000582812 COL4A5P29400 1685 aa12.02□□□□□ -0.49
NDEL1-215ENST00000582812 DDNO94850 711 aaPredicted RBP12.01□□□□□ -0.49
NDEL1-215ENST00000582812 TRIM28Q13263 835 aaKnown RBP12.01□□□□□ -0.49
NDEL1-215ENST00000582812 HSP90AB3PQ58FF7 597 aa12.01□□□□□ -0.49
NDEL1-215ENST00000582812 SUSD4Q5VX71 490 aa12.01□□□□□ -0.49
NDEL1-215ENST00000582812 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
NDEL1-215ENST00000582812 PNMA8AQ86V59 439 aaPredicted RBP12.01□□□□□ -0.49
NDEL1-215ENST00000582812 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
NDEL1-215ENST00000582812 TSPYL4Q9UJ04 414 aa12.01□□□□□ -0.49
NDEL1-215ENST00000582812 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
NDEL1-215ENST00000582812 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
NDEL1-215ENST00000582812 LRRC37AA6NMS7 1700 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 ZNF853P0CG23 659 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 CNGB1Q14028 1251 aaPredicted RBP12□□□□□ -0.49
NDEL1-215ENST00000582812 TMC4Q7Z404 712 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 RUNDC1Q96C34 613 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 ATP6V0A2Q9Y487 856 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 ZNF541Q9H0D2 1346 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 CNTNAP1P78357 1384 aa12□□□□□ -0.49
NDEL1-215ENST00000582812 BBOX1O75936 387 aa11.99□□□□□ -0.49
NDEL1-215ENST00000582812 TCIRG1Q13488 830 aa11.99□□□□□ -0.49
NDEL1-215ENST00000582812 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
NDEL1-215ENST00000582812 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
NDEL1-215ENST00000582812 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
NDEL1-215ENST00000582812 ZNF277Q9NRM2 450 aaPredicted RBP11.99□□□□□ -0.49
NDEL1-215ENST00000582812 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
NDEL1-215ENST00000582812 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
NDEL1-215ENST00000582812 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
NDEL1-215ENST00000582812 THSD7BQ9C0I4 1608 aa11.98□□□□□ -0.49
NDEL1-215ENST00000582812 HTRA3P83110 453 aa11.98□□□□□ -0.49
NDEL1-215ENST00000582812 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
NDEL1-215ENST00000582812 NLRP10Q86W26 655 aa11.98□□□□□ -0.49
NDEL1-215ENST00000582812 NUTM1Q86Y26 1132 aa11.98□□□□□ -0.49
NDEL1-215ENST00000582812 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
NDEL1-215ENST00000582812 LAMB2P55268 1798 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 RASSF10A6NK89 507 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-215ENST00000582812 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 SP8Q8IXZ3 490 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 JDP2Q8WYK2 163 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 RPGRQ92834 1020 aaKnown RBP11.97□□□□□ -0.49
NDEL1-215ENST00000582812 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 PRKRIP1Q9H875 184 aaPredicted RBP11.97□□□□□ -0.49
NDEL1-215ENST00000582812 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
NDEL1-215ENST00000582812 ZNF609O15014 1411 aa11.96□□□□□ -0.49
NDEL1-215ENST00000582812 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-215ENST00000582812 MYL6BP14649 208 aa11.96□□□□□ -0.49
NDEL1-215ENST00000582812 EPHX2P34913 555 aa11.96□□□□□ -0.49
NDEL1-215ENST00000582812 SCNN1DP51172 638 aa11.96□□□□□ -0.49
NDEL1-215ENST00000582812 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.49
NDEL1-215ENST00000582812 PLBD2Q8NHP8 589 aa11.96□□□□□ -0.49
NDEL1-215ENST00000582812 ISCA1Q9BUE6 129 aa11.96□□□□□ -0.49
NDEL1-215ENST00000582812 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-215ENST00000582812 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-215ENST00000582812 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.5
NDEL1-215ENST00000582812 ABCC4O15439 1325 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 SH3TC1Q8TE82 1336 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 GPTP24298 496 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 USP50Q70EL3 339 aaPredicted RBP11.95□□□□□ -0.5
NDEL1-215ENST00000582812 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 SUPT20HQ8NEM7 779 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 CHMP4AQ9BY43 222 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
NDEL1-215ENST00000582812 TMEM88BA6NKF7 163 aa11.94□□□□□ -0.5
NDEL1-215ENST00000582812 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
NDEL1-215ENST00000582812 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
NDEL1-215ENST00000582812 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
NDEL1-215ENST00000582812 DDX60Q8IY21 1712 aaKnown RBP11.94□□□□□ -0.5
NDEL1-215ENST00000582812 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
NDEL1-215ENST00000582812 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
NDEL1-215ENST00000582812 GRAPQ13588 217 aa11.93□□□□□ -0.5
NDEL1-215ENST00000582812 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
NDEL1-215ENST00000582812 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
NDEL1-215ENST00000582812 GRAPLQ8TC17 118 aaPredicted RBP11.93□□□□□ -0.5
NDEL1-215ENST00000582812 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
NDEL1-215ENST00000582812 HHIPL1Q96JK4 782 aa11.93□□□□□ -0.5
NDEL1-215ENST00000582812 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
NDEL1-215ENST00000582812 ZNRF3Q9ULT6 936 aa11.93□□□□□ -0.5
NDEL1-215ENST00000582812 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
NDEL1-215ENST00000582812 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
NDEL1-215ENST00000582812 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
NDEL1-215ENST00000582812 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms