RNA–Protein interactions for RNA: ENST00000582544.1

CACNB1-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 2

Gene CACNB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-210ENST00000582544 ZNF541Q9H0D2 1346 aa10.41□□□□□ -0.74
CACNB1-210ENST00000582544 HOXA10P31260 410 aaPredicted RBP10.41□□□□□ -0.74
CACNB1-210ENST00000582544 FKBP4Q02790 459 aaKnown RBP eCLIP10.41□□□□□ -0.74
CACNB1-210ENST00000582544 PDIA6Q15084 440 aa10.41□□□□□ -0.74
CACNB1-210ENST00000582544 CCDC93Q567U6 631 aa10.41□□□□□ -0.74
CACNB1-210ENST00000582544 TPTE2Q6XPS3 522 aa10.41□□□□□ -0.74
CACNB1-210ENST00000582544 TTLL7Q6ZT98 887 aa10.41□□□□□ -0.74
CACNB1-210ENST00000582544 ZNF34Q8IZ26 560 aa10.41□□□□□ -0.74
CACNB1-210ENST00000582544 PNISRQ8TF01 805 aaKnown RBP10.41□□□□□ -0.74
CACNB1-210ENST00000582544 FZD9O00144 591 aa10.4□□□□□ -0.74
CACNB1-210ENST00000582544 COL13A1Q5TAT6 717 aaPredicted RBP10.4□□□□□ -0.74
CACNB1-210ENST00000582544 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
CACNB1-210ENST00000582544 SLC51AQ86UW1 340 aa10.4□□□□□ -0.74
CACNB1-210ENST00000582544 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
CACNB1-210ENST00000582544 COL4A1P02462 1669 aa10.39□□□□□ -0.75
CACNB1-210ENST00000582544 NTSR2O95665 410 aa10.39□□□□□ -0.75
CACNB1-210ENST00000582544 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
CACNB1-210ENST00000582544 DDX10Q13206 875 aaKnown RBP10.39□□□□□ -0.75
CACNB1-210ENST00000582544 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
CACNB1-210ENST00000582544 C3orf67Q6ZVT6 689 aa10.39□□□□□ -0.75
CACNB1-210ENST00000582544 PSMD1Q99460 953 aa10.39□□□□□ -0.75
CACNB1-210ENST00000582544 TAF1DQ9H5J8 278 aaPredicted RBP10.39□□□□□ -0.75
CACNB1-210ENST00000582544 ZNF277Q9NRM2 450 aaPredicted RBP10.39□□□□□ -0.75
CACNB1-210ENST00000582544 PSME4Q14997 1843 aa10.38□□□□□ -0.75
CACNB1-210ENST00000582544 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
CACNB1-210ENST00000582544 PROSER3Q2NL68 480 aa10.38□□□□□ -0.75
CACNB1-210ENST00000582544 SUSD4Q5VX71 490 aa10.38□□□□□ -0.75
CACNB1-210ENST00000582544 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
CACNB1-210ENST00000582544 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
CACNB1-210ENST00000582544 NPM2Q86SE8 214 aaKnown RBP10.38□□□□□ -0.75
CACNB1-210ENST00000582544 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
CACNB1-210ENST00000582544 RTKN2Q8IZC4 609 aa10.38□□□□□ -0.75
CACNB1-210ENST00000582544 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
CACNB1-210ENST00000582544 SPDYE2BA6NHP3 402 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 SPDYE6P0CI01 402 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 IARSP41252 1262 aaKnown RBP10.37□□□□□ -0.75
CACNB1-210ENST00000582544 SPDYE2Q495Y8 402 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 LDHDQ86WU2 507 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 NYXQ9GZU5 481 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 BABAM1Q9NWV8 329 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 CNTNAP1P78357 1384 aa10.37□□□□□ -0.75
CACNB1-210ENST00000582544 ZNF646O15015 1829 aaPredicted RBP10.36□□□□□ -0.75
CACNB1-210ENST00000582544 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
CACNB1-210ENST00000582544 FAM177BA6PVY3 158 aa10.36□□□□□ -0.75
CACNB1-210ENST00000582544 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
CACNB1-210ENST00000582544 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
CACNB1-210ENST00000582544 SYNE4Q8N205 404 aa10.36□□□□□ -0.75
CACNB1-210ENST00000582544 CRAMP1Q96RY5 1269 aa10.36□□□□□ -0.75
CACNB1-210ENST00000582544 RRP7AQ9Y3A4 280 aaKnown RBP10.36□□□□□ -0.75
CACNB1-210ENST00000582544 MYH3P11055 1940 aa10.35□□□□□ -0.75
CACNB1-210ENST00000582544 NPHP1O15259 732 aa10.35□□□□□ -0.75
CACNB1-210ENST00000582544 HSPA1AP0DMV8 641 aaKnown RBP10.35□□□□□ -0.75
CACNB1-210ENST00000582544 HSPA1BP0DMV9 641 aaKnown RBP10.35□□□□□ -0.75
CACNB1-210ENST00000582544 TMPOP42166 694 aaKnown RBP10.35□□□□□ -0.75
CACNB1-210ENST00000582544 RALBP1Q15311 655 aa10.35□□□□□ -0.75
CACNB1-210ENST00000582544 CC2D2BQ6DHV5 1058 aa10.35□□□□□ -0.75
CACNB1-210ENST00000582544 GPC2Q8N158 579 aa10.35□□□□□ -0.75
CACNB1-210ENST00000582544 ZBTB3Q9H5J0 574 aa10.35□□□□□ -0.75
CACNB1-210ENST00000582544 CACNA1FO60840 1977 aa10.34□□□□□ -0.75
CACNB1-210ENST00000582544 MYL6BP14649 208 aa10.34□□□□□ -0.75
CACNB1-210ENST00000582544 GPTP24298 496 aa10.34□□□□□ -0.75
CACNB1-210ENST00000582544 KIF6Q6ZMV9 814 aa10.34□□□□□ -0.75
CACNB1-210ENST00000582544 NGEFQ8N5V2 710 aa10.34□□□□□ -0.75
CACNB1-210ENST00000582544 TRIM35Q9UPQ4 493 aa10.34□□□□□ -0.75
CACNB1-210ENST00000582544 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 CHL1O00533 1208 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 ANXA1P04083 346 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 EPHX2P34913 555 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 SCNN1DP51172 638 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 RIPK4P57078 832 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 PARP10Q53GL7 1025 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 RTFDC1Q9BY42 306 aaPredicted RBP10.33□□□□□ -0.76
CACNB1-210ENST00000582544 PNNQ9H307 717 aaKnown RBP10.33□□□□□ -0.76
CACNB1-210ENST00000582544 TSPYL4Q9UJ04 414 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 ABCC4O15439 1325 aa10.33□□□□□ -0.76
CACNB1-210ENST00000582544 KRT24Q2M2I5 525 aa10.32□□□□□ -0.76
CACNB1-210ENST00000582544 MYBBP1AQ9BQG0 1328 aaKnown RBP10.32□□□□□ -0.76
CACNB1-210ENST00000582544 RASSF10A6NK89 507 aa10.31□□□□□ -0.76
CACNB1-210ENST00000582544 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
CACNB1-210ENST00000582544 NEFMP07197 916 aa10.31□□□□□ -0.76
CACNB1-210ENST00000582544 NLRP10Q86W26 655 aa10.31□□□□□ -0.76
CACNB1-210ENST00000582544 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
CACNB1-210ENST00000582544 RBM17Q96I25 401 aaKnown RBP10.31□□□□□ -0.76
CACNB1-210ENST00000582544 DDX21Q9NR30 783 aaKnown RBP eCLIP10.31□□□□□ -0.76
CACNB1-210ENST00000582544 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
CACNB1-210ENST00000582544 ATP6V0A2Q9Y487 856 aa10.31□□□□□ -0.76
CACNB1-210ENST00000582544 TMEM88BA6NKF7 163 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 HOXB7P09629 217 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
CACNB1-210ENST00000582544 VEGFBP49765 207 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 MAP1SQ66K74 1059 aaPredicted RBP10.3□□□□□ -0.76
CACNB1-210ENST00000582544 COPS6Q7L5N1 327 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
CACNB1-210ENST00000582544 PNMA8AQ86V59 439 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms