RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 SLC10A5Q5PT55 438 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
RTTN-208ENST00000581709 SRCIN1Q9C0H9 1055 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 RCAN3Q9UKA8 241 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
RTTN-208ENST00000581709 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 SRCAPQ6ZRS2 3230 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 NTSR2O95665 410 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 IGKV5-2P06315 115 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
RTTN-208ENST00000581709 ALDH1L1O75891 902 aa11.3□□□□□ -0.6
RTTN-208ENST00000581709 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
RTTN-208ENST00000581709 GCKRQ14397 625 aa11.3□□□□□ -0.6
RTTN-208ENST00000581709 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
RTTN-208ENST00000581709 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
RTTN-208ENST00000581709 ZKSCAN2Q63HK3 967 aa11.3□□□□□ -0.6
RTTN-208ENST00000581709 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
RTTN-208ENST00000581709 C9orf78Q9NZ63 289 aaPredicted RBP11.3□□□□□ -0.6
RTTN-208ENST00000581709 IBTKQ9P2D0 1353 aaPredicted RBP11.29□□□□□ -0.6
RTTN-208ENST00000581709 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
RTTN-208ENST00000581709 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
RTTN-208ENST00000581709 MS4A1P11836 297 aa11.29□□□□□ -0.6
RTTN-208ENST00000581709 HCLS1P14317 486 aaPredicted RBP11.29□□□□□ -0.6
RTTN-208ENST00000581709 DPEP1P16444 411 aa11.29□□□□□ -0.6
RTTN-208ENST00000581709 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
RTTN-208ENST00000581709 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
RTTN-208ENST00000581709 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
RTTN-208ENST00000581709 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
RTTN-208ENST00000581709 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
RTTN-208ENST00000581709 H7C1W4 665 aa11.28□□□□□ -0.6
RTTN-208ENST00000581709 CHRNA5P30532 468 aa11.28□□□□□ -0.6
RTTN-208ENST00000581709 SYNE4Q8N205 404 aa11.28□□□□□ -0.6
RTTN-208ENST00000581709 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.28□□□□□ -0.6
RTTN-208ENST00000581709 ZNF622Q969S3 477 aaKnown RBP eCLIP11.28□□□□□ -0.6
RTTN-208ENST00000581709 MASTLQ96GX5 879 aa11.28□□□□□ -0.6
RTTN-208ENST00000581709 SRGNP10124 158 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 TRIM27P14373 513 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 NPR1P16066 1061 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 KCNA3P22001 575 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 ALDH1B1P30837 517 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 GPR162Q16538 588 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 FTSJ3Q8IY81 847 aaKnown RBP11.27□□□□□ -0.61
RTTN-208ENST00000581709 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
RTTN-208ENST00000581709 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
RTTN-208ENST00000581709 CNKSR1Q969H4 720 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
RTTN-208ENST00000581709 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.61
RTTN-208ENST00000581709 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 GRM8O00222 908 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 PDE8AO60658 829 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
RTTN-208ENST00000581709 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
RTTN-208ENST00000581709 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
RTTN-208ENST00000581709 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
RTTN-208ENST00000581709 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
RTTN-208ENST00000581709 LRP5O75197 1615 aa11.25□□□□□ -0.61
RTTN-208ENST00000581709 MAPK8IP2Q13387 824 aaPredicted RBP11.25□□□□□ -0.61
RTTN-208ENST00000581709 SF3B3Q15393 1217 aaKnown RBP11.25□□□□□ -0.61
RTTN-208ENST00000581709 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
RTTN-208ENST00000581709 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
RTTN-208ENST00000581709 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
RTTN-208ENST00000581709 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
RTTN-208ENST00000581709 CDHR2Q9BYE9 1310 aa11.25□□□□□ -0.61
RTTN-208ENST00000581709 SCN7AQ01118 1682 aa11.24□□□□□ -0.61
RTTN-208ENST00000581709 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
RTTN-208ENST00000581709 HOXA10P31260 410 aaPredicted RBP11.24□□□□□ -0.61
RTTN-208ENST00000581709 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
RTTN-208ENST00000581709 USP44Q9H0E7 712 aa11.24□□□□□ -0.61
RTTN-208ENST00000581709 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
RTTN-208ENST00000581709 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
RTTN-208ENST00000581709 BBOX1O75936 387 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 GNAI3P08754 354 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
RTTN-208ENST00000581709 CASP7P55210 303 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 PLA2G12BQ9BX93 195 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 ABCC4O15439 1325 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 ABCC12Q96J65 1359 aa11.23□□□□□ -0.61
RTTN-208ENST00000581709 PXDNLA1KZ92 1463 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 UTYO14607 1347 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 PLIN1O60240 522 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
RTTN-208ENST00000581709 CTSWP56202 376 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 RIC1Q4ADV7 1423 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 TMEM57Q8N5G2 664 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 TTLL11Q8NHH1 800 aa11.22□□□□□ -0.61
RTTN-208ENST00000581709 BCORQ6W2J9 1755 aa11.21□□□□□ -0.61
RTTN-208ENST00000581709 CSF1RP07333 972 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms