RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 A0A087WZG4 1122 aa13.16□□□□□ -0.3
CTC1-208ENST00000581671 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
CTC1-208ENST00000581671 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
CTC1-208ENST00000581671 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
CTC1-208ENST00000581671 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
CTC1-208ENST00000581671 SETDB2Q96T68 719 aa13.16□□□□□ -0.3
CTC1-208ENST00000581671 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
CTC1-208ENST00000581671 POLR2AP24928 1970 aaKnown RBP13.15□□□□□ -0.3
CTC1-208ENST00000581671 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
CTC1-208ENST00000581671 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
CTC1-208ENST00000581671 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
CTC1-208ENST00000581671 C2orf69Q8N8R5 385 aa13.15□□□□□ -0.3
CTC1-208ENST00000581671 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
CTC1-208ENST00000581671 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
CTC1-208ENST00000581671 TESK2Q96S53 571 aa13.14□□□□□ -0.31
CTC1-208ENST00000581671 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
CTC1-208ENST00000581671 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
CTC1-208ENST00000581671 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
CTC1-208ENST00000581671 GPR25O00155 361 aa13.13□□□□□ -0.31
CTC1-208ENST00000581671 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
CTC1-208ENST00000581671 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
CTC1-208ENST00000581671 SLC39A6Q13433 755 aa13.12□□□□□ -0.31
CTC1-208ENST00000581671 ALDH1B1P30837 517 aa13.11□□□□□ -0.31
CTC1-208ENST00000581671 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
CTC1-208ENST00000581671 NOM1Q5C9Z4 860 aaKnown RBP13.11□□□□□ -0.31
CTC1-208ENST00000581671 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
CTC1-208ENST00000581671 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
CTC1-208ENST00000581671 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
CTC1-208ENST00000581671 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
CTC1-208ENST00000581671 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
CTC1-208ENST00000581671 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
CTC1-208ENST00000581671 CXCL9Q07325 125 aa13.09□□□□□ -0.31
CTC1-208ENST00000581671 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
CTC1-208ENST00000581671 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
CTC1-208ENST00000581671 FKTNO75072 461 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 SLC52A2Q9HAB3 445 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.32
CTC1-208ENST00000581671 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
CTC1-208ENST00000581671 STARD3NLO95772 234 aa13.07□□□□□ -0.32
CTC1-208ENST00000581671 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
CTC1-208ENST00000581671 SPTBN5Q9NRC6 3674 aaKnown RBP13.07□□□□□ -0.32
CTC1-208ENST00000581671 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
CTC1-208ENST00000581671 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
CTC1-208ENST00000581671 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
CTC1-208ENST00000581671 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
CTC1-208ENST00000581671 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
CTC1-208ENST00000581671 AOC3Q16853 763 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 SLC51AQ86UW1 340 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 MPNDQ8N594 471 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 PRO3102Q9H379 93 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 POLKQ9UBT6 870 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
CTC1-208ENST00000581671 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
CTC1-208ENST00000581671 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
CTC1-208ENST00000581671 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
CTC1-208ENST00000581671 OTOP1Q7RTM1 612 aa13.04□□□□□ -0.32
CTC1-208ENST00000581671 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
CTC1-208ENST00000581671 LRCH3Q96II8 777 aa13.04□□□□□ -0.32
CTC1-208ENST00000581671 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
CTC1-208ENST00000581671 TTC28Q96AY4 2481 aa13.04□□□□□ -0.32
CTC1-208ENST00000581671 H7C1D1 291 aa13.03□□□□□ -0.32
CTC1-208ENST00000581671 TM4SF4P48230 202 aa13.03□□□□□ -0.32
CTC1-208ENST00000581671 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
CTC1-208ENST00000581671 TPTE2Q6XPS3 522 aa13.03□□□□□ -0.32
CTC1-208ENST00000581671 UBR2Q8IWV8 1755 aa13.02□□□□□ -0.32
CTC1-208ENST00000581671 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
CTC1-208ENST00000581671 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
CTC1-208ENST00000581671 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
CTC1-208ENST00000581671 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.33
CTC1-208ENST00000581671 MRC1P22897 1456 aa13.02□□□□□ -0.33
CTC1-208ENST00000581671 RAD17O75943 681 aa13.01□□□□□ -0.33
CTC1-208ENST00000581671 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
CTC1-208ENST00000581671 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
CTC1-208ENST00000581671 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
CTC1-208ENST00000581671 PTPN22Q9Y2R2 807 aa13.01□□□□□ -0.33
CTC1-208ENST00000581671 FAM177BA6PVY3 158 aa13□□□□□ -0.33
CTC1-208ENST00000581671 EGFRP00533 1210 aa13□□□□□ -0.33
CTC1-208ENST00000581671 TNIP1Q15025 636 aa13□□□□□ -0.33
CTC1-208ENST00000581671 CRY2Q49AN0 593 aa13□□□□□ -0.33
CTC1-208ENST00000581671 DZIP3Q86Y13 1208 aaKnown RBP13□□□□□ -0.33
CTC1-208ENST00000581671 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
CTC1-208ENST00000581671 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
CTC1-208ENST00000581671 COL9A1P20849 921 aa12.99□□□□□ -0.33
CTC1-208ENST00000581671 TBC1D10BQ4KMP7 808 aaPredicted RBP12.99□□□□□ -0.33
CTC1-208ENST00000581671 CLEC4GQ6UXB4 293 aa12.99□□□□□ -0.33
CTC1-208ENST00000581671 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
CTC1-208ENST00000581671 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
CTC1-208ENST00000581671 A1BGP04217 495 aa12.98□□□□□ -0.33
CTC1-208ENST00000581671 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTC1-208ENST00000581671 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
CTC1-208ENST00000581671 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
CTC1-208ENST00000581671 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
CTC1-208ENST00000581671 DPF3Q92784 378 aa12.97□□□□□ -0.33
CTC1-208ENST00000581671 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
CTC1-208ENST00000581671 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms