RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 RNF123Q5XPI4 1314 aa27.28■■□□□ 1.96
CCDC42-203ENST00000581598 POTECB2RU33 542 aa27.28■■□□□ 1.96
CCDC42-203ENST00000581598 ANXA1P04083 346 aa27.28■■□□□ 1.96
CCDC42-203ENST00000581598 HSP90AB3PQ58FF7 597 aa27.28■■□□□ 1.96
CCDC42-203ENST00000581598 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
CCDC42-203ENST00000581598 KRT24Q2M2I5 525 aa27.27■■□□□ 1.96
CCDC42-203ENST00000581598 CC2D2BQ6DHV5 1058 aa27.27■■□□□ 1.96
CCDC42-203ENST00000581598 COPS6Q7L5N1 327 aa27.27■■□□□ 1.96
CCDC42-203ENST00000581598 SLC10A5Q5PT55 438 aa27.26■■□□□ 1.95
CCDC42-203ENST00000581598 ZNF853P0CG23 659 aa27.25■■□□□ 1.95
CCDC42-203ENST00000581598 XAGE3Q8WTP9 111 aa27.25■■□□□ 1.95
CCDC42-203ENST00000581598 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
CCDC42-203ENST00000581598 CRAMP1Q96RY5 1269 aa27.25■■□□□ 1.95
CCDC42-203ENST00000581598 UTP14AQ9BVJ6 771 aaKnown RBP27.25■■□□□ 1.95
CCDC42-203ENST00000581598 GRIPAP1Q4V328 841 aa27.24■■□□□ 1.95
CCDC42-203ENST00000581598 OLFM4Q6UX06 510 aa27.24■■□□□ 1.95
CCDC42-203ENST00000581598 NECTIN2Q92692 538 aa27.24■■□□□ 1.95
CCDC42-203ENST00000581598 PSMD1Q99460 953 aa27.24■■□□□ 1.95
CCDC42-203ENST00000581598 APAF1O14727 1248 aa27.23■■□□□ 1.95
CCDC42-203ENST00000581598 RBM17Q96I25 401 aaKnown RBP27.23■■□□□ 1.95
CCDC42-203ENST00000581598 CALD1Q05682 793 aaKnown RBP27.22■■□□□ 1.95
CCDC42-203ENST00000581598 AIMP1Q12904 312 aaKnown RBP27.22■■□□□ 1.95
CCDC42-203ENST00000581598 TCIRG1Q13488 830 aa27.22■■□□□ 1.95
CCDC42-203ENST00000581598 HDGFL1Q5TGJ6 251 aa27.22■■□□□ 1.95
CCDC42-203ENST00000581598 NLRP3Q96P20 1036 aa27.22■■□□□ 1.95
CCDC42-203ENST00000581598 ZNF277Q9NRM2 450 aaPredicted RBP27.22■■□□□ 1.95
CCDC42-203ENST00000581598 CHPF2Q9P2E5 772 aa27.22■■□□□ 1.95
CCDC42-203ENST00000581598 SCN4AP35499 1836 aa27.22■■□□□ 1.95
CCDC42-203ENST00000581598 DDNO94850 711 aaPredicted RBP27.21■■□□□ 1.95
CCDC42-203ENST00000581598 NLRP10Q86W26 655 aa27.21■■□□□ 1.95
CCDC42-203ENST00000581598 SYNE4Q8N205 404 aa27.21■■□□□ 1.95
CCDC42-203ENST00000581598 MBIPQ9NS73 344 aa27.21■■□□□ 1.95
CCDC42-203ENST00000581598 IFT57Q9NWB7 429 aa27.21■■□□□ 1.95
CCDC42-203ENST00000581598 DBF4Q9UBU7 674 aaPredicted RBP27.21■■□□□ 1.95
CCDC42-203ENST00000581598 IARSP41252 1262 aaKnown RBP27.2■■□□□ 1.94
CCDC42-203ENST00000581598 L3MBTL3Q96JM7 780 aaPredicted RBP27.2■■□□□ 1.94
CCDC42-203ENST00000581598 LAMB2P55268 1798 aa27.2■■□□□ 1.94
CCDC42-203ENST00000581598 HTRA3P83110 453 aa27.19■■□□□ 1.94
CCDC42-203ENST00000581598 DUSP27Q5VZP5 1158 aa27.19■■□□□ 1.94
CCDC42-203ENST00000581598 C3orf67Q6ZVT6 689 aa27.19■■□□□ 1.94
CCDC42-203ENST00000581598 PLBD2Q8NHP8 589 aa27.19■■□□□ 1.94
CCDC42-203ENST00000581598 GNAI1P63096 354 aa27.18■■□□□ 1.94
CCDC42-203ENST00000581598 HYPKQ9NX55 129 aa27.17■■□□□ 1.94
CCDC42-203ENST00000581598 IQCA1LA6NCM1 817 aa27.16■■□□□ 1.94
CCDC42-203ENST00000581598 FZD9O00144 591 aa27.16■■□□□ 1.94
CCDC42-203ENST00000581598 PPEF1O14829 653 aaPredicted RBP27.16■■□□□ 1.94
CCDC42-203ENST00000581598 ANKRD13DQ6ZTN6 518 aa27.15■■□□□ 1.94
CCDC42-203ENST00000581598 SH3TC1Q8TE82 1336 aa27.15■■□□□ 1.94
CCDC42-203ENST00000581598 ZNF541Q9H0D2 1346 aa27.15■■□□□ 1.94
CCDC42-203ENST00000581598 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
CCDC42-203ENST00000581598 JDP2Q8WYK2 163 aa27.13■■□□□ 1.93
CCDC42-203ENST00000581598 KLRG1Q96E93 195 aa27.13■■□□□ 1.93
CCDC42-203ENST00000581598 ISCA1Q9BUE6 129 aa27.13■■□□□ 1.93
CCDC42-203ENST00000581598 TRMT112Q9UI30 125 aaKnown RBP27.13■■□□□ 1.93
CCDC42-203ENST00000581598 ATP6V0A2Q9Y487 856 aa27.12■■□□□ 1.93
CCDC42-203ENST00000581598 ABCC4O15439 1325 aa27.12■■□□□ 1.93
CCDC42-203ENST00000581598 CHADLQ6NUI6 762 aa27.11■■□□□ 1.93
CCDC42-203ENST00000581598 VPS33BQ9H267 617 aa27.11■■□□□ 1.93
CCDC42-203ENST00000581598 TAF1DQ9H5J8 278 aaPredicted RBP27.11■■□□□ 1.93
CCDC42-203ENST00000581598 COL4A5P29400 1685 aa27.11■■□□□ 1.93
CCDC42-203ENST00000581598 DDX60Q8IY21 1712 aaKnown RBP27.1■■□□□ 1.93
CCDC42-203ENST00000581598 BBOX1O75936 387 aa27.1■■□□□ 1.93
CCDC42-203ENST00000581598 HCLS1P14317 486 aaPredicted RBP27.1■■□□□ 1.93
CCDC42-203ENST00000581598 TRIM28Q13263 835 aaKnown RBP27.1■■□□□ 1.93
CCDC42-203ENST00000581598 CCDC184Q52MB2 194 aa27.1■■□□□ 1.93
CCDC42-203ENST00000581598 TMX4Q9H1E5 349 aaPredicted RBP27.1■■□□□ 1.93
CCDC42-203ENST00000581598 GPC2Q8N158 579 aa27.09■■□□□ 1.93
CCDC42-203ENST00000581598 JMYQ8N9B5 988 aa27.09■■□□□ 1.93
CCDC42-203ENST00000581598 CHMP4AQ9BY43 222 aa27.09■■□□□ 1.93
CCDC42-203ENST00000581598 PCNTO95613 3336 aa27.08■■□□□ 1.93
CCDC42-203ENST00000581598 CCDC27Q2M243 656 aa27.08■■□□□ 1.93
CCDC42-203ENST00000581598 LDHDQ86WU2 507 aa27.08■■□□□ 1.93
CCDC42-203ENST00000581598 NCBP3Q53F19 620 aaKnown RBP27.07■■□□□ 1.92
CCDC42-203ENST00000581598 DDX46Q7L014 1031 aaKnown RBP27.07■■□□□ 1.92
CCDC42-203ENST00000581598 SP8Q8IXZ3 490 aa27.07■■□□□ 1.92
CCDC42-203ENST00000581598 RTFDC1Q9BY42 306 aaPredicted RBP27.07■■□□□ 1.92
CCDC42-203ENST00000581598 HACL1Q9UJ83 578 aa27.07■■□□□ 1.92
CCDC42-203ENST00000581598 ADAMTSL1Q8N6G6 1762 aa27.07■■□□□ 1.92
CCDC42-203ENST00000581598 POTEIP0CG38 1075 aa27.06■■□□□ 1.92
CCDC42-203ENST00000581598 POTEJP0CG39 1038 aa27.06■■□□□ 1.92
CCDC42-203ENST00000581598 EIF6P56537 245 aaKnown RBP27.06■■□□□ 1.92
CCDC42-203ENST00000581598 GRAPQ13588 217 aa27.06■■□□□ 1.92
CCDC42-203ENST00000581598 SLC51AQ86UW1 340 aa27.06■■□□□ 1.92
CCDC42-203ENST00000581598 LARGE2Q8N3Y3 721 aa27.06■■□□□ 1.92
CCDC42-203ENST00000581598 GRAPLQ8TC17 118 aaPredicted RBP27.06■■□□□ 1.92
CCDC42-203ENST00000581598 TCERG1O14776 1098 aaKnown RBP27.05■■□□□ 1.92
CCDC42-203ENST00000581598 TMC4Q7Z404 712 aa27.05■■□□□ 1.92
CCDC42-203ENST00000581598 C8orf58Q8NAV2 365 aa27.05■■□□□ 1.92
CCDC42-203ENST00000581598 SUPT20HQ8NEM7 779 aa27.05■■□□□ 1.92
CCDC42-203ENST00000581598 ATP5J2-PTCD1G3V325 749 aa27.04■■□□□ 1.92
CCDC42-203ENST00000581598 GOLGA2Q08379 1002 aa27.04■■□□□ 1.92
CCDC42-203ENST00000581598 SF3B3Q15393 1217 aaKnown RBP27.04■■□□□ 1.92
CCDC42-203ENST00000581598 LRRC37AA6NMS7 1700 aa27.04■■□□□ 1.92
CCDC42-203ENST00000581598 TAF1P21675 1872 aa27.04■■□□□ 1.92
CCDC42-203ENST00000581598 ELL2O00472 640 aaPredicted RBP27.03■■□□□ 1.92
CCDC42-203ENST00000581598 EPHX2P34913 555 aa27.03■■□□□ 1.92
CCDC42-203ENST00000581598 PNMA8AQ86V59 439 aaPredicted RBP27.03■■□□□ 1.92
CCDC42-203ENST00000581598 PHAXQ9H814 394 aaKnown RBP27.03■■□□□ 1.92
CCDC42-203ENST00000581598 CCDC30Q5VVM6 783 aa27.02■■□□□ 1.92
CCDC42-203ENST00000581598 RIC3Q7Z5B4 369 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms