RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 G2E3Q7L622 706 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 NUTM1Q86Y26 1132 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 METTL22Q9BUU2 404 aaPredicted RBP16.23■□□□□ 0.19
SNORD55-201ENST00000581525 ARFGEF1Q9Y6D6 1849 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 ABCC12Q96J65 1359 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
SNORD55-201ENST00000581525 NPHP1O15259 732 aa16.22■□□□□ 0.19
SNORD55-201ENST00000581525 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
SNORD55-201ENST00000581525 CCDC191Q8NCU4 936 aa16.22■□□□□ 0.19
SNORD55-201ENST00000581525 CHD4Q14839 1912 aa16.21■□□□□ 0.19
SNORD55-201ENST00000581525 PI4KAP2A4QPH2 592 aa16.21■□□□□ 0.19
SNORD55-201ENST00000581525 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
SNORD55-201ENST00000581525 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
SNORD55-201ENST00000581525 PI4KAP1Q8N8J0 262 aa16.21■□□□□ 0.19
SNORD55-201ENST00000581525 CDCA7LQ96GN5 454 aa16.21■□□□□ 0.19
SNORD55-201ENST00000581525 ADCY9O60503 1353 aa16.21■□□□□ 0.19
SNORD55-201ENST00000581525 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.18
SNORD55-201ENST00000581525 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
SNORD55-201ENST00000581525 FLIIQ13045 1269 aa16.2■□□□□ 0.18
SNORD55-201ENST00000581525 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNORD55-201ENST00000581525 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
SNORD55-201ENST00000581525 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
SNORD55-201ENST00000581525 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
SNORD55-201ENST00000581525 CACNA1FO60840 1977 aa16.2■□□□□ 0.18
SNORD55-201ENST00000581525 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 IGKV5-2P06315 115 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 ARHGAP27Q6ZUM4 889 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 NLRP3Q96P20 1036 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 COL11A2P13942 1736 aaPredicted RBP16.19■□□□□ 0.18
SNORD55-201ENST00000581525 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
SNORD55-201ENST00000581525 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
SNORD55-201ENST00000581525 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
SNORD55-201ENST00000581525 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
SNORD55-201ENST00000581525 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
SNORD55-201ENST00000581525 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
SNORD55-201ENST00000581525 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
SNORD55-201ENST00000581525 PCCAP05165 728 aaPredicted RBP16.17■□□□□ 0.18
SNORD55-201ENST00000581525 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
SNORD55-201ENST00000581525 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
SNORD55-201ENST00000581525 MYD88Q99836 296 aa16.17■□□□□ 0.18
SNORD55-201ENST00000581525 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
SNORD55-201ENST00000581525 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
SNORD55-201ENST00000581525 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
SNORD55-201ENST00000581525 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
SNORD55-201ENST00000581525 TNRC6CQ9HCJ0 1690 aaKnown RBP16.15■□□□□ 0.18
SNORD55-201ENST00000581525 SLX4Q8IY92 1834 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 NFKBIEO00221 500 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 C21orf2O43822 256 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
SNORD55-201ENST00000581525 PRELPP51888 382 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 CC2D2BQ6DHV5 1058 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 MRPL50Q8N5N7 158 aaKnown RBP16.15■□□□□ 0.18
SNORD55-201ENST00000581525 SNED1Q8TER0 1413 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 DNAAF4Q8WXU2 420 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
SNORD55-201ENST00000581525 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
SNORD55-201ENST00000581525 NEURL1BA8MQ27 555 aa16.14■□□□□ 0.17
SNORD55-201ENST00000581525 H7C1W4 665 aa16.14■□□□□ 0.17
SNORD55-201ENST00000581525 HSP90B1P14625 803 aaKnown RBP16.14■□□□□ 0.17
SNORD55-201ENST00000581525 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.17
SNORD55-201ENST00000581525 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.17
SNORD55-201ENST00000581525 ZNF784Q8NCA9 323 aaPredicted RBP16.14■□□□□ 0.17
SNORD55-201ENST00000581525 LINS1Q8NG48 757 aa16.14■□□□□ 0.17
SNORD55-201ENST00000581525 IRS4O14654 1257 aaPredicted RBP16.13■□□□□ 0.17
SNORD55-201ENST00000581525 BBOX1O75936 387 aa16.13■□□□□ 0.17
SNORD55-201ENST00000581525 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
SNORD55-201ENST00000581525 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
SNORD55-201ENST00000581525 SSH1Q8WYL5 1049 aa16.13■□□□□ 0.17
SNORD55-201ENST00000581525 RPGRQ92834 1020 aaKnown RBP16.13■□□□□ 0.17
SNORD55-201ENST00000581525 LMNB1P20700 586 aa16.12■□□□□ 0.17
SNORD55-201ENST00000581525 CASP7P55210 303 aa16.12■□□□□ 0.17
SNORD55-201ENST00000581525 GCKRQ14397 625 aa16.12■□□□□ 0.17
SNORD55-201ENST00000581525 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
SNORD55-201ENST00000581525 ZC3H4Q9UPT8 1303 aaKnown RBP16.12■□□□□ 0.17
SNORD55-201ENST00000581525 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
SNORD55-201ENST00000581525 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
SNORD55-201ENST00000581525 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
SNORD55-201ENST00000581525 PSMD1Q99460 953 aa16.11■□□□□ 0.17
SNORD55-201ENST00000581525 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
SNORD55-201ENST00000581525 FER1L6Q2WGJ9 1857 aa16.11■□□□□ 0.17
SNORD55-201ENST00000581525 PTPRCP08575 1304 aa16.11■□□□□ 0.17
SNORD55-201ENST00000581525 PDE8AO60658 829 aa16.1■□□□□ 0.17
SNORD55-201ENST00000581525 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNORD55-201ENST00000581525 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
SNORD55-201ENST00000581525 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
SNORD55-201ENST00000581525 ABCC4O15439 1325 aa16.1■□□□□ 0.17
SNORD55-201ENST00000581525 SBF1O95248 1867 aa16.1■□□□□ 0.17
SNORD55-201ENST00000581525 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
SNORD55-201ENST00000581525 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNORD55-201ENST00000581525 RASSF7Q02833 373 aa16.09■□□□□ 0.17
SNORD55-201ENST00000581525 GRAPQ13588 217 aa16.09■□□□□ 0.17
SNORD55-201ENST00000581525 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
SNORD55-201ENST00000581525 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
SNORD55-201ENST00000581525 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
SNORD55-201ENST00000581525 ZBED9Q6R2W3 1325 aa16.09■□□□□ 0.17
SNORD55-201ENST00000581525 F6X3S4 739 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms