RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 C3orf67Q6ZVT6 689 aa15.35■□□□□ 0.05
PPP4R1-219ENST00000581250 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
PPP4R1-219ENST00000581250 PLBD2Q8NHP8 589 aa15.35■□□□□ 0.05
PPP4R1-219ENST00000581250 UTP14AQ9BVJ6 771 aaKnown RBP15.35■□□□□ 0.05
PPP4R1-219ENST00000581250 RIC1Q4ADV7 1423 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 KLRG2A4D1S0 409 aaPredicted RBP15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 NFKBIEO00221 500 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 TCIRG1Q13488 830 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 WDR63Q8IWG1 891 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 GPBP1L1Q9HC44 474 aaPredicted RBP15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
PPP4R1-219ENST00000581250 PRELPP51888 382 aa15.33■□□□□ 0.04
PPP4R1-219ENST00000581250 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
PPP4R1-219ENST00000581250 RIC3Q7Z5B4 369 aa15.33■□□□□ 0.04
PPP4R1-219ENST00000581250 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
PPP4R1-219ENST00000581250 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
PPP4R1-219ENST00000581250 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.04
PPP4R1-219ENST00000581250 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
PPP4R1-219ENST00000581250 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
PPP4R1-219ENST00000581250 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
PPP4R1-219ENST00000581250 LMNB1P20700 586 aa15.31■□□□□ 0.04
PPP4R1-219ENST00000581250 EXOSC9Q06265 439 aaKnown RBP15.31■□□□□ 0.04
PPP4R1-219ENST00000581250 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
PPP4R1-219ENST00000581250 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
PPP4R1-219ENST00000581250 DICER1Q9UPY3 1922 aaKnown RBP15.31■□□□□ 0.04
PPP4R1-219ENST00000581250 TAF1P21675 1872 aa15.3■□□□□ 0.04
PPP4R1-219ENST00000581250 SH3TC1Q8TE82 1336 aa15.3■□□□□ 0.04
PPP4R1-219ENST00000581250 MYD88Q99836 296 aa15.3■□□□□ 0.04
PPP4R1-219ENST00000581250 ISCA1Q9BUE6 129 aa15.3■□□□□ 0.04
PPP4R1-219ENST00000581250 TAOK3Q9H2K8 898 aa15.3■□□□□ 0.04
PPP4R1-219ENST00000581250 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 CCER2I3L3R5 266 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 G2E3Q7L622 706 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 NLRP3Q96P20 1036 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
PPP4R1-219ENST00000581250 ZNF521Q96K83 1311 aa15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 CACNA1FO60840 1977 aa15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 SOGA3Q5TF21 947 aa15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 C7orf43Q8WVR3 580 aa15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 RBM17Q96I25 401 aaKnown RBP15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 MAP3K2Q9Y2U5 619 aa15.28■□□□□ 0.04
PPP4R1-219ENST00000581250 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
PPP4R1-219ENST00000581250 HOXA10P31260 410 aaPredicted RBP15.27■□□□□ 0.04
PPP4R1-219ENST00000581250 DIEXFQ68CQ4 756 aaKnown RBP15.27■□□□□ 0.04
PPP4R1-219ENST00000581250 NMRK2Q9NPI5 230 aa15.27■□□□□ 0.04
PPP4R1-219ENST00000581250 ABCC4O15439 1325 aa15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 LTBP3Q9NS15 1303 aa15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 PI4KAP2A4QPH2 592 aa15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 VAMP4O75379 141 aa15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 SLC10A5Q5PT55 438 aa15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 PI4KAP1Q8N8J0 262 aa15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
PPP4R1-219ENST00000581250 FLIIQ13045 1269 aa15.25■□□□□ 0.03
PPP4R1-219ENST00000581250 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
PPP4R1-219ENST00000581250 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
PPP4R1-219ENST00000581250 CRAMP1Q96RY5 1269 aa15.25■□□□□ 0.03
PPP4R1-219ENST00000581250 ZNF277Q9NRM2 450 aaPredicted RBP15.25■□□□□ 0.03
PPP4R1-219ENST00000581250 COL4A1P02462 1669 aa15.25■□□□□ 0.03
PPP4R1-219ENST00000581250 IRS4O14654 1257 aaPredicted RBP15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 FKBP5Q13451 457 aaPredicted RBP15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 MIER1Q8N108 512 aa15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
PPP4R1-219ENST00000581250 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
PPP4R1-219ENST00000581250 ZC3H4Q9UPT8 1303 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-219ENST00000581250 KIF3CO14782 793 aa15.23■□□□□ 0.03
PPP4R1-219ENST00000581250 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-219ENST00000581250 DDX46Q7L014 1031 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-219ENST00000581250 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
PPP4R1-219ENST00000581250 IGKV5-2P06315 115 aa15.22■□□□□ 0.03
PPP4R1-219ENST00000581250 CWF19L2Q2TBE0 894 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-219ENST00000581250 ZBTB38Q8NAP3 1195 aaPredicted RBP15.22■□□□□ 0.03
PPP4R1-219ENST00000581250 CCDC191Q8NCU4 936 aa15.22■□□□□ 0.03
PPP4R1-219ENST00000581250 MYH3P11055 1940 aa15.21■□□□□ 0.03
PPP4R1-219ENST00000581250 E9PSI1 815 aa15.21■□□□□ 0.03
PPP4R1-219ENST00000581250 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
PPP4R1-219ENST00000581250 CDCA7LQ96GN5 454 aa15.21■□□□□ 0.03
PPP4R1-219ENST00000581250 RRAGCQ9HB90 399 aa15.21■□□□□ 0.03
PPP4R1-219ENST00000581250 COL4A5P29400 1685 aa15.21■□□□□ 0.03
PPP4R1-219ENST00000581250 LRRC37AA6NMS7 1700 aa15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 SPEF2Q9C093 1822 aa15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 GLTPD2A6NH11 291 aa15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 F6X3S4 739 aa15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 PCCAP05165 728 aaPredicted RBP15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 GRAPQ13588 217 aa15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 GRAPLQ8TC17 118 aaPredicted RBP15.2■□□□□ 0.02
PPP4R1-219ENST00000581250 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms