RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 ANKRD36CQ5JPF3 1778 aa27.72■■■□□ 2.03
CSNK1D-216ENST00000581108 RIC1Q4ADV7 1423 aa27.72■■■□□ 2.03
CSNK1D-216ENST00000581108 DUSP27Q5VZP5 1158 aa27.71■■■□□ 2.03
CSNK1D-216ENST00000581108 C3orf67Q6ZVT6 689 aa27.71■■■□□ 2.03
CSNK1D-216ENST00000581108 RPGRQ92834 1020 aaKnown RBP27.71■■■□□ 2.03
CSNK1D-216ENST00000581108 POTECB2RU33 542 aa27.7■■■□□ 2.02
CSNK1D-216ENST00000581108 HOXB7P09629 217 aa27.7■■■□□ 2.02
CSNK1D-216ENST00000581108 HOXA10P31260 410 aaPredicted RBP27.7■■■□□ 2.02
CSNK1D-216ENST00000581108 FKBP4Q02790 459 aaKnown RBP eCLIP27.7■■■□□ 2.02
CSNK1D-216ENST00000581108 RTKN2Q8IZC4 609 aa27.7■■■□□ 2.02
CSNK1D-216ENST00000581108 UTP14AQ9BVJ6 771 aaKnown RBP27.7■■■□□ 2.02
CSNK1D-216ENST00000581108 APLP1P51693 650 aa27.69■■■□□ 2.02
CSNK1D-216ENST00000581108 FSTL1Q12841 308 aa27.69■■■□□ 2.02
CSNK1D-216ENST00000581108 ZNF277Q9NRM2 450 aaPredicted RBP27.69■■■□□ 2.02
CSNK1D-216ENST00000581108 WDR90Q96KV7 1748 aa27.68■■■□□ 2.02
CSNK1D-216ENST00000581108 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
CSNK1D-216ENST00000581108 TCIRG1Q13488 830 aa27.68■■■□□ 2.02
CSNK1D-216ENST00000581108 HSP90AB3PQ58FF7 597 aa27.68■■■□□ 2.02
CSNK1D-216ENST00000581108 IFT57Q9NWB7 429 aa27.68■■■□□ 2.02
CSNK1D-216ENST00000581108 DBF4Q9UBU7 674 aaPredicted RBP27.68■■■□□ 2.02
CSNK1D-216ENST00000581108 GNAI1P63096 354 aa27.67■■■□□ 2.02
CSNK1D-216ENST00000581108 SLC10A5Q5PT55 438 aa27.67■■■□□ 2.02
CSNK1D-216ENST00000581108 NLRP10Q86W26 655 aa27.67■■■□□ 2.02
CSNK1D-216ENST00000581108 NLRP3Q96P20 1036 aa27.67■■■□□ 2.02
CSNK1D-216ENST00000581108 DDNO94850 711 aaPredicted RBP27.66■■■□□ 2.02
CSNK1D-216ENST00000581108 CALD1Q05682 793 aaKnown RBP27.66■■■□□ 2.02
CSNK1D-216ENST00000581108 RBM17Q96I25 401 aaKnown RBP27.66■■■□□ 2.02
CSNK1D-216ENST00000581108 CRAMP1Q96RY5 1269 aa27.66■■■□□ 2.02
CSNK1D-216ENST00000581108 ELL2O00472 640 aaPredicted RBP27.65■■■□□ 2.02
CSNK1D-216ENST00000581108 SYNE4Q8N205 404 aa27.65■■■□□ 2.02
CSNK1D-216ENST00000581108 SMC1BQ8NDV3 1235 aa27.65■■■□□ 2.02
CSNK1D-216ENST00000581108 ANKRD13DQ6ZTN6 518 aa27.64■■■□□ 2.02
CSNK1D-216ENST00000581108 PLBD2Q8NHP8 589 aa27.64■■■□□ 2.02
CSNK1D-216ENST00000581108 ZNF428Q96B54 188 aa27.64■■■□□ 2.02
CSNK1D-216ENST00000581108 TCERG1O14776 1098 aaKnown RBP27.63■■■□□ 2.01
CSNK1D-216ENST00000581108 SLC51AQ86UW1 340 aa27.63■■■□□ 2.01
CSNK1D-216ENST00000581108 HYPKQ9NX55 129 aa27.63■■■□□ 2.01
CSNK1D-216ENST00000581108 TRMT112Q9UI30 125 aaKnown RBP27.63■■■□□ 2.01
CSNK1D-216ENST00000581108 SNED1Q8TER0 1413 aa27.63■■■□□ 2.01
CSNK1D-216ENST00000581108 HCLS1P14317 486 aaPredicted RBP27.62■■■□□ 2.01
CSNK1D-216ENST00000581108 IARSP41252 1262 aaKnown RBP27.62■■■□□ 2.01
CSNK1D-216ENST00000581108 CC2D2BQ6DHV5 1058 aa27.62■■■□□ 2.01
CSNK1D-216ENST00000581108 LAMB2P55268 1798 aa27.62■■■□□ 2.01
CSNK1D-216ENST00000581108 RNF123Q5XPI4 1314 aa27.62■■■□□ 2.01
CSNK1D-216ENST00000581108 PSMD1Q99460 953 aa27.61■■■□□ 2.01
CSNK1D-216ENST00000581108 PPEF1O14829 653 aaPredicted RBP27.6■■■□□ 2.01
CSNK1D-216ENST00000581108 HTRA3P83110 453 aa27.6■■■□□ 2.01
CSNK1D-216ENST00000581108 DNAJC5GQ8N7S2 189 aa27.6■■■□□ 2.01
CSNK1D-216ENST00000581108 C8orf58Q8NAV2 365 aa27.6■■■□□ 2.01
CSNK1D-216ENST00000581108 ANP32CO43423 234 aa27.58■■■□□ 2.01
CSNK1D-216ENST00000581108 SH3TC1Q8TE82 1336 aa27.58■■■□□ 2.01
CSNK1D-216ENST00000581108 ZNF541Q9H0D2 1346 aa27.58■■■□□ 2.01
CSNK1D-216ENST00000581108 ATP5J2-PTCD1G3V325 749 aa27.57■■■□□ 2
CSNK1D-216ENST00000581108 ISCA1Q9BUE6 129 aa27.57■■■□□ 2
CSNK1D-216ENST00000581108 PHAXQ9H814 394 aaKnown RBP27.57■■■□□ 2
CSNK1D-216ENST00000581108 MRS2Q9HD23 443 aa27.57■■■□□ 2
CSNK1D-216ENST00000581108 GRIPAP1Q4V328 841 aa27.56■■■□□ 2
CSNK1D-216ENST00000581108 ABCC4O15439 1325 aa27.56■■■□□ 2
CSNK1D-216ENST00000581108 TAF1P21675 1872 aa27.55■■■□□ 2
CSNK1D-216ENST00000581108 FZD9O00144 591 aa27.55■■■□□ 2
CSNK1D-216ENST00000581108 SCN4AP35499 1836 aa27.54■■■□□ 2
CSNK1D-216ENST00000581108 WWC1Q8IX03 1113 aa27.54■■■□□ 2
CSNK1D-216ENST00000581108 JDP2Q8WYK2 163 aa27.54■■■□□ 2
CSNK1D-216ENST00000581108 FAM89AQ96GI7 184 aa27.54■■■□□ 2
CSNK1D-216ENST00000581108 L3MBTL3Q96JM7 780 aaPredicted RBP27.54■■■□□ 2
CSNK1D-216ENST00000581108 ATP6V0A2Q9Y487 856 aa27.54■■■□□ 2
CSNK1D-216ENST00000581108 POTEIP0CG38 1075 aa27.53■■■□□ 2
CSNK1D-216ENST00000581108 POTEJP0CG39 1038 aa27.53■■■□□ 2
CSNK1D-216ENST00000581108 CCDC27Q2M243 656 aa27.53■■■□□ 2
CSNK1D-216ENST00000581108 RIC3Q7Z5B4 369 aa27.53■■■□□ 2
CSNK1D-216ENST00000581108 TSPYL6Q8N831 410 aa27.53■■■□□ 2
CSNK1D-216ENST00000581108 TSR2Q969E8 191 aaKnown RBP27.53■■■□□ 2
CSNK1D-216ENST00000581108 DDX60Q8IY21 1712 aaKnown RBP27.53■■■□□ 2
CSNK1D-216ENST00000581108 COL4A5P29400 1685 aa27.52■■■□□ 2
CSNK1D-216ENST00000581108 BBOX1O75936 387 aa27.52■■■□□ 2
CSNK1D-216ENST00000581108 DDX46Q7L014 1031 aaKnown RBP27.52■■■□□ 2
CSNK1D-216ENST00000581108 TMX4Q9H1E5 349 aaPredicted RBP27.52■■■□□ 2
CSNK1D-216ENST00000581108 IQCA1LA6NCM1 817 aa27.51■■□□□ 1.99
CSNK1D-216ENST00000581108 GOLGA2Q08379 1002 aa27.51■■□□□ 1.99
CSNK1D-216ENST00000581108 RTL5Q5HYW3 569 aaPredicted RBP27.51■■□□□ 1.99
CSNK1D-216ENST00000581108 TRIM28Q13263 835 aaKnown RBP27.5■■□□□ 1.99
CSNK1D-216ENST00000581108 CCDC30Q5VVM6 783 aa27.5■■□□□ 1.99
CSNK1D-216ENST00000581108 LARGE2Q8N3Y3 721 aa27.5■■□□□ 1.99
CSNK1D-216ENST00000581108 TAF1DQ9H5J8 278 aaPredicted RBP27.5■■□□□ 1.99
CSNK1D-216ENST00000581108 CHADLQ6NUI6 762 aa27.49■■□□□ 1.99
CSNK1D-216ENST00000581108 SP8Q8IXZ3 490 aa27.49■■□□□ 1.99
CSNK1D-216ENST00000581108 GRAPQ13588 217 aa27.48■■□□□ 1.99
CSNK1D-216ENST00000581108 GPC2Q8N158 579 aa27.48■■□□□ 1.99
CSNK1D-216ENST00000581108 GRAPLQ8TC17 118 aaPredicted RBP27.48■■□□□ 1.99
CSNK1D-216ENST00000581108 MYD88Q99836 296 aa27.47■■□□□ 1.99
CSNK1D-216ENST00000581108 CHMP4AQ9BY43 222 aa27.47■■□□□ 1.99
CSNK1D-216ENST00000581108 EIF6P56537 245 aaKnown RBP27.46■■□□□ 1.99
CSNK1D-216ENST00000581108 KLRG1Q96E93 195 aa27.46■■□□□ 1.99
CSNK1D-216ENST00000581108 HACL1Q9UJ83 578 aa27.46■■□□□ 1.99
CSNK1D-216ENST00000581108 SALL2Q9Y467 1007 aaPredicted RBP27.46■■□□□ 1.99
CSNK1D-216ENST00000581108 IRS4O14654 1257 aaPredicted RBP27.45■■□□□ 1.98
CSNK1D-216ENST00000581108 PPIP5K2O43314 1243 aa27.45■■□□□ 1.98
CSNK1D-216ENST00000581108 SF3B3Q15393 1217 aaKnown RBP27.45■■□□□ 1.98
CSNK1D-216ENST00000581108 AOC3Q16853 763 aa27.45■■□□□ 1.98
CSNK1D-216ENST00000581108 MPNDQ8N594 471 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms