RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 ABCC6O95255 1503 aa8.54□□□□□ -1.04
SENP3-206ENST00000581093 CCDC7Q96M83 1385 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 PLEKHG3A1L390 1219 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 RGL2O15211 777 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 ZRANB2O95218 330 aaKnown RBP eCLIP8.53□□□□□ -1.04
SENP3-206ENST00000581093 CSB-PGBD3P0DP91 1061 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
SENP3-206ENST00000581093 WDR78Q5VTH9 848 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
SENP3-206ENST00000581093 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
SENP3-206ENST00000581093 FOXD4Q12950 439 aaPredicted RBP8.52□□□□□ -1.05
SENP3-206ENST00000581093 TAF3Q5VWG9 929 aa8.52□□□□□ -1.05
SENP3-206ENST00000581093 THSD4Q6ZMP0 1018 aa8.52□□□□□ -1.05
SENP3-206ENST00000581093 MSL3Q8N5Y2 521 aaKnown RBP8.52□□□□□ -1.05
SENP3-206ENST00000581093 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
SENP3-206ENST00000581093 MICAL1Q8TDZ2 1067 aa8.52□□□□□ -1.05
SENP3-206ENST00000581093 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
SENP3-206ENST00000581093 YY1AP1Q9H869 796 aa8.52□□□□□ -1.05
SENP3-206ENST00000581093 PPIP5K1Q6PFW1 1433 aa8.52□□□□□ -1.05
SENP3-206ENST00000581093 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 TRAK2O60296 914 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 NLRP6P59044 892 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 CXorf38Q8TB03 319 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 ABHD8Q96I13 439 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 C10orf71Q711Q0 1435 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 KDM2BQ8NHM5 1336 aa8.51□□□□□ -1.05
SENP3-206ENST00000581093 TNRC18O15417 2968 aaPredicted RBP8.5□□□□□ -1.05
SENP3-206ENST00000581093 SLIT3O75094 1523 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 PIK3C2AO00443 1686 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 FOXN1O15353 648 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 PPFIA4O75335 1185 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 RGS19P49795 217 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
SENP3-206ENST00000581093 SMC5Q8IY18 1101 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
SENP3-206ENST00000581093 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 RRAGCQ9HB90 399 aa8.5□□□□□ -1.05
SENP3-206ENST00000581093 PLEKHG2Q9H7P9 1386 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 LY75O60449 1722 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 CPSF1Q10570 1443 aaKnown RBP8.49□□□□□ -1.05
SENP3-206ENST00000581093 A6NJR5 290 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 UNCXA6NJT0 531 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 SSFA2P28290 1259 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 FLIIQ13045 1269 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 CSPP1Q1MSJ5 1256 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 NBPF6Q5VWK0 638 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 ARHGAP27Q6ZUM4 889 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 ARHGEF25Q86VW2 580 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
SENP3-206ENST00000581093 FAM43AQ8N2R8 423 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 FLAD1Q8NFF5 587 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
SENP3-206ENST00000581093 SNRNP27Q8WVK2 155 aaKnown RBP8.49□□□□□ -1.05
SENP3-206ENST00000581093 NBPF4Q96M43 638 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 DRC1Q96MC2 740 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 JADE2Q9NQC1 790 aa8.49□□□□□ -1.05
SENP3-206ENST00000581093 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
SENP3-206ENST00000581093 IL2RBP14784 551 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 SSR1P43307 286 aaKnown RBP8.48□□□□□ -1.05
SENP3-206ENST00000581093 RGS3P49796 1198 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 SLC20A2Q08357 652 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 MTA1Q13330 715 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 C9orf131Q5VYM1 1079 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 CLEC4GQ6UXB4 293 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 ARMCX6Q7L4S7 300 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 ANKRD23Q86SG2 305 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 PXDNLA1KZ92 1463 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
SENP3-206ENST00000581093 CTCFP49711 727 aaPredicted RBP8.47□□□□□ -1.05
SENP3-206ENST00000581093 ZNF775Q96BV0 537 aaPredicted RBP8.47□□□□□ -1.05
SENP3-206ENST00000581093 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
SENP3-206ENST00000581093 EVI5LQ96CN4 794 aa8.47□□□□□ -1.05
SENP3-206ENST00000581093 RAI14Q9P0K7 980 aa8.47□□□□□ -1.05
SENP3-206ENST00000581093 BCS1LQ9Y276 419 aa8.47□□□□□ -1.05
SENP3-206ENST00000581093 TNRC6CQ9HCJ0 1690 aaKnown RBP8.46□□□□□ -1.05
SENP3-206ENST00000581093 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 IRF6O14896 467 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 GFRA3O60609 400 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
SENP3-206ENST00000581093 ZKSCAN8Q15776 578 aaPredicted RBP8.46□□□□□ -1.06
SENP3-206ENST00000581093 UTP14CQ5TAP6 766 aaKnown RBP8.46□□□□□ -1.06
SENP3-206ENST00000581093 CCDC181Q5TID7 509 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 ZNF787Q6DD87 383 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 ZNF280DQ6N043 979 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 GEMIN8Q9NWZ8 242 aaKnown RBP8.46□□□□□ -1.06
SENP3-206ENST00000581093 CEP126Q9P2H0 1117 aa8.46□□□□□ -1.06
SENP3-206ENST00000581093 RBM19Q9Y4C8 960 aaKnown RBP8.46□□□□□ -1.06
SENP3-206ENST00000581093 CCDC85CA6NKD9 419 aa8.45□□□□□ -1.06
SENP3-206ENST00000581093 HSP90AA1P07900 732 aaKnown RBP8.45□□□□□ -1.06
SENP3-206ENST00000581093 ZFYVE27Q5T4F4 411 aa8.45□□□□□ -1.06
SENP3-206ENST00000581093 DDX46Q7L014 1031 aaKnown RBP8.45□□□□□ -1.06
SENP3-206ENST00000581093 KCNH5Q8NCM2 988 aa8.45□□□□□ -1.06
SENP3-206ENST00000581093 AIDAQ96BJ3 306 aa8.45□□□□□ -1.06
SENP3-206ENST00000581093 CCDC85AQ96PX6 553 aaPredicted RBP8.45□□□□□ -1.06
SENP3-206ENST00000581093 NLRP2Q9NX02 1062 aa8.45□□□□□ -1.06
SENP3-206ENST00000581093 PKD1L3Q7Z443 1732 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms