RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 BNIP3LO60238 219 aa11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 UBAP2LQ14157 1087 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 FOXR1Q6PIV2 292 aa11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 SV2AQ7L0J3 742 aa11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 PIK3R5Q8WYR1 880 aa11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
TRAPPC8-208ENST00000581057 MAPTP10636 758 aaKnown RBP11.73□□□□□ -0.53
TRAPPC8-208ENST00000581057 EPB42P16452 691 aa11.73□□□□□ -0.53
TRAPPC8-208ENST00000581057 PCSK2P16519 638 aa11.73□□□□□ -0.53
TRAPPC8-208ENST00000581057 MZF1P28698 734 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-208ENST00000581057 TTC16Q8NEE8 873 aa11.73□□□□□ -0.53
TRAPPC8-208ENST00000581057 PDGFAP04085 211 aa11.72□□□□□ -0.53
TRAPPC8-208ENST00000581057 FAM157BP0CG42 384 aa11.72□□□□□ -0.53
TRAPPC8-208ENST00000581057 TNP2Q05952 138 aa11.72□□□□□ -0.53
TRAPPC8-208ENST00000581057 SFSWAPQ12872 951 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-208ENST00000581057 C8orf34Q49A92 452 aa11.72□□□□□ -0.53
TRAPPC8-208ENST00000581057 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
TRAPPC8-208ENST00000581057 KCNH4Q9UQ05 1017 aa11.71□□□□□ -0.53
TRAPPC8-208ENST00000581057 CD33P20138 364 aa11.7□□□□□ -0.54
TRAPPC8-208ENST00000581057 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
TRAPPC8-208ENST00000581057 A6NHS1 94 aa11.69□□□□□ -0.54
TRAPPC8-208ENST00000581057 NDFIP2Q9NV92 336 aa11.69□□□□□ -0.54
TRAPPC8-208ENST00000581057 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
TRAPPC8-208ENST00000581057 EFSO43281 561 aa11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 NANOS1Q8WY41 292 aaKnown RBP11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 ATXN7L1Q9ULK2 861 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC8-208ENST00000581057 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
TRAPPC8-208ENST00000581057 FGFR3P22607 806 aa11.67□□□□□ -0.54
TRAPPC8-208ENST00000581057 USP5P45974 858 aa11.67□□□□□ -0.54
TRAPPC8-208ENST00000581057 GRIN2CQ14957 1233 aa11.67□□□□□ -0.54
TRAPPC8-208ENST00000581057 TRIP4Q15650 581 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-208ENST00000581057 KCNMB2Q9Y691 235 aa11.67□□□□□ -0.54
TRAPPC8-208ENST00000581057 H3BM21 787 aa11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 TERTO14746 1132 aaKnown RBP11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 XYLBO75191 536 aa11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 KRT25Q7Z3Z0 450 aa11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 CFHR5Q9BXR6 569 aa11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 RBCK1Q9BYM8 510 aa11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 HCN2Q9UL51 889 aa11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 FNDC3AQ9Y2H6 1198 aaKnown RBP11.66□□□□□ -0.54
TRAPPC8-208ENST00000581057 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.54
TRAPPC8-208ENST00000581057 TMC7Q7Z402 723 aa11.65□□□□□ -0.54
TRAPPC8-208ENST00000581057 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
TRAPPC8-208ENST00000581057 ASB16Q96NS5 453 aa11.65□□□□□ -0.54
TRAPPC8-208ENST00000581057 CITED4Q96RK1 184 aa11.65□□□□□ -0.54
TRAPPC8-208ENST00000581057 ANKRD33BA6NCL7 494 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 KCNQ4P56696 695 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 CTBSQ01459 385 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 RAB44Q7Z6P3 723 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 NPAS3Q8IXF0 933 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 GJD3Q8N144 294 aa11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
TRAPPC8-208ENST00000581057 SASH3O75995 380 aa11.63□□□□□ -0.55
TRAPPC8-208ENST00000581057 DNAJC14Q6Y2X3 702 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC8-208ENST00000581057 ZNF438Q7Z4V0 828 aa11.63□□□□□ -0.55
TRAPPC8-208ENST00000581057 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
TRAPPC8-208ENST00000581057 SPEM2Q0P670 501 aa11.62□□□□□ -0.55
TRAPPC8-208ENST00000581057 CCINQ13939 588 aa11.62□□□□□ -0.55
TRAPPC8-208ENST00000581057 SLC30A3Q99726 388 aa11.62□□□□□ -0.55
TRAPPC8-208ENST00000581057 MX2P20592 715 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 EHHADHQ08426 723 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 BHMTQ93088 406 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 DMRTB1Q96MA1 342 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 FAM129BQ96TA1 746 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 GSX2Q9BZM3 304 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 NIF3L1Q9GZT8 377 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 PRR12Q9ULL5 1215 aa11.61□□□□□ -0.55
TRAPPC8-208ENST00000581057 GPR182O15218 404 aa11.6□□□□□ -0.55
TRAPPC8-208ENST00000581057 BMP4P12644 408 aa11.6□□□□□ -0.55
TRAPPC8-208ENST00000581057 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
TRAPPC8-208ENST00000581057 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
TRAPPC8-208ENST00000581057 GAS6Q14393 721 aa11.59□□□□□ -0.55
TRAPPC8-208ENST00000581057 FOXD4L4Q8WXT5 416 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC8-208ENST00000581057 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
TRAPPC8-208ENST00000581057 RARAP10276 462 aa11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 NFKB1P19838 968 aa11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 PLCB3Q01970 1234 aa11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 PDE12Q6L8Q7 609 aaKnown RBP11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 NLRP13Q86W25 1043 aa11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
TRAPPC8-208ENST00000581057 C2CD2LO14523 706 aa11.57□□□□□ -0.56
TRAPPC8-208ENST00000581057 EGFRP00533 1210 aa11.57□□□□□ -0.56
TRAPPC8-208ENST00000581057 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
TRAPPC8-208ENST00000581057 IRF7Q92985 503 aa11.57□□□□□ -0.56
TRAPPC8-208ENST00000581057 FOXD3Q9UJU5 478 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC8-208ENST00000581057 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC8-208ENST00000581057 TREHO43280 583 aa11.56□□□□□ -0.56
TRAPPC8-208ENST00000581057 ERCC3P19447 782 aa11.56□□□□□ -0.56
TRAPPC8-208ENST00000581057 MAPK8P45983 427 aa11.56□□□□□ -0.56
TRAPPC8-208ENST00000581057 NEUROD1Q13562 356 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms