RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 MEIS3Q99687 375 aa9.32□□□□□ -0.92
SENP3-205ENST00000581010 ZBTB3Q9H5J0 574 aa9.32□□□□□ -0.92
SENP3-205ENST00000581010 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
SENP3-205ENST00000581010 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
SENP3-205ENST00000581010 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
SENP3-205ENST00000581010 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
SENP3-205ENST00000581010 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
SENP3-205ENST00000581010 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
SENP3-205ENST00000581010 METTL22Q9BUU2 404 aaPredicted RBP9.31□□□□□ -0.92
SENP3-205ENST00000581010 PCDHB15Q9Y5E8 787 aa9.31□□□□□ -0.92
SENP3-205ENST00000581010 ANKRD36CQ5JPF3 1778 aa9.31□□□□□ -0.92
SENP3-205ENST00000581010 UBR3Q6ZT12 1888 aa9.31□□□□□ -0.92
SENP3-205ENST00000581010 A0A087WZG4 1122 aa9.3□□□□□ -0.92
SENP3-205ENST00000581010 IL6STP40189 918 aaPredicted RBP9.3□□□□□ -0.92
SENP3-205ENST00000581010 HDAC1Q13547 482 aaPredicted RBP9.3□□□□□ -0.92
SENP3-205ENST00000581010 CWF19L2Q2TBE0 894 aaKnown RBP9.3□□□□□ -0.92
SENP3-205ENST00000581010 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
SENP3-205ENST00000581010 BEND3Q5T5X7 828 aa9.3□□□□□ -0.92
SENP3-205ENST00000581010 RPAP2Q8IXW5 612 aaPredicted RBP9.3□□□□□ -0.92
SENP3-205ENST00000581010 ZBTB1Q9Y2K1 713 aa9.3□□□□□ -0.92
SENP3-205ENST00000581010 ARFGEF1Q9Y6D6 1849 aa9.3□□□□□ -0.92
SENP3-205ENST00000581010 SBF1O95248 1867 aa9.3□□□□□ -0.92
SENP3-205ENST00000581010 GRM8O00222 908 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 ITPK1Q13572 414 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 TTLL7Q6ZT98 887 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 DZIP3Q86Y13 1208 aaKnown RBP9.29□□□□□ -0.92
SENP3-205ENST00000581010 AK7Q96M32 723 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
SENP3-205ENST00000581010 ZNF652Q9Y2D9 606 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 LRRFIP2Q9Y608 721 aaKnown RBP9.29□□□□□ -0.92
SENP3-205ENST00000581010 MAP3K15Q6ZN16 1313 aa9.29□□□□□ -0.92
SENP3-205ENST00000581010 NUP98P52948 1817 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 PDE4DIPQ5VU43 2346 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 COL15A1P39059 1388 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 NEURL1BA8MQ27 555 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 GNPATO15228 680 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 IGHDP01880 384 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 SMIM5Q71RC9 77 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 GCC1Q96CN9 775 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 BCL11AQ9H165 835 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 RRAGCQ9HB90 399 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 KDM2BQ8NHM5 1336 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 CNTNAP4Q9C0A0 1308 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 C4BP0C0L5 1744 aa9.28□□□□□ -0.92
SENP3-205ENST00000581010 FOXN1O15353 648 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 GCKRQ14397 625 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 CEP85Q6P2H3 762 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 ARHGAP27Q6ZUM4 889 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 LRP10Q7Z4F1 713 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 ANKRD44Q8N8A2 993 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 LINC00116Q8NCU8 138 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 SMC1BQ8NDV3 1235 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 USP44Q9H0E7 712 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 TBC1D2BQ9UPU7 963 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 RTCBQ9Y3I0 505 aaKnown RBP9.27□□□□□ -0.93
SENP3-205ENST00000581010 C10orf71Q711Q0 1435 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 BCORQ6W2J9 1755 aa9.27□□□□□ -0.93
SENP3-205ENST00000581010 MYH14Q7Z406 1995 aaKnown RBP9.26□□□□□ -0.93
SENP3-205ENST00000581010 ERVV-1B6SEH8 477 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 ZPR1O75312 459 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 NBPF7P0C2Y1 421 aaPredicted RBP9.26□□□□□ -0.93
SENP3-205ENST00000581010 RGS3P49796 1198 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
SENP3-205ENST00000581010 TCIRG1Q13488 830 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 C9orf131Q5VYM1 1079 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 INTS5Q6P9B9 1019 aaKnown RBP9.26□□□□□ -0.93
SENP3-205ENST00000581010 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
SENP3-205ENST00000581010 UBE3BQ7Z3V4 1068 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 CCDC191Q8NCU4 936 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 CHMP3Q9Y3E7 222 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
SENP3-205ENST00000581010 APBB1O00213 710 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 NPHP1O15259 732 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 SRGAP3O43295 1099 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 PHF14O94880 888 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 IGKV5-2P06315 115 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 GPTP24298 496 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 EIF5P55010 431 aaKnown RBP9.25□□□□□ -0.93
SENP3-205ENST00000581010 MLLT1Q03111 559 aaPredicted RBP9.25□□□□□ -0.93
SENP3-205ENST00000581010 RTL5Q5HYW3 569 aaPredicted RBP9.25□□□□□ -0.93
SENP3-205ENST00000581010 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
SENP3-205ENST00000581010 AMIGO3Q86WK7 504 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 ABHD8Q96I13 439 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
SENP3-205ENST00000581010 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
SENP3-205ENST00000581010 RFC4P35249 363 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 ATP8B2P98198 1209 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 HSP90AB4PQ58FF6 505 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 ANKRD45Q5TZF3 282 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 PDZRN3Q9UPQ7 1066 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 MYH3P11055 1940 aa9.24□□□□□ -0.93
SENP3-205ENST00000581010 IBTKQ9P2D0 1353 aaPredicted RBP9.24□□□□□ -0.93
SENP3-205ENST00000581010 C4AP0C0L4 1744 aa9.23□□□□□ -0.93
SENP3-205ENST00000581010 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
SENP3-205ENST00000581010 HLFQ16534 295 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms