RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ANKRD36CQ5JPF3 1778 aa27.72■■■□□ 2.03
CSNK1D-215ENST00000580784 RIC1Q4ADV7 1423 aa27.72■■■□□ 2.03
CSNK1D-215ENST00000580784 DUSP27Q5VZP5 1158 aa27.71■■■□□ 2.03
CSNK1D-215ENST00000580784 C3orf67Q6ZVT6 689 aa27.71■■■□□ 2.03
CSNK1D-215ENST00000580784 RPGRQ92834 1020 aaKnown RBP27.71■■■□□ 2.03
CSNK1D-215ENST00000580784 POTECB2RU33 542 aa27.7■■■□□ 2.02
CSNK1D-215ENST00000580784 HOXB7P09629 217 aa27.7■■■□□ 2.02
CSNK1D-215ENST00000580784 HOXA10P31260 410 aaPredicted RBP27.7■■■□□ 2.02
CSNK1D-215ENST00000580784 FKBP4Q02790 459 aaKnown RBP eCLIP27.7■■■□□ 2.025e-7■□□□□ 8.6
CSNK1D-215ENST00000580784 RTKN2Q8IZC4 609 aa27.7■■■□□ 2.02
CSNK1D-215ENST00000580784 UTP14AQ9BVJ6 771 aaKnown RBP27.7■■■□□ 2.02
CSNK1D-215ENST00000580784 APLP1P51693 650 aa27.69■■■□□ 2.02
CSNK1D-215ENST00000580784 FSTL1Q12841 308 aa27.69■■■□□ 2.02
CSNK1D-215ENST00000580784 ZNF277Q9NRM2 450 aaPredicted RBP27.69■■■□□ 2.02
CSNK1D-215ENST00000580784 WDR90Q96KV7 1748 aa27.68■■■□□ 2.02
CSNK1D-215ENST00000580784 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
CSNK1D-215ENST00000580784 TCIRG1Q13488 830 aa27.68■■■□□ 2.02
CSNK1D-215ENST00000580784 HSP90AB3PQ58FF7 597 aa27.68■■■□□ 2.02
CSNK1D-215ENST00000580784 IFT57Q9NWB7 429 aa27.68■■■□□ 2.02
CSNK1D-215ENST00000580784 DBF4Q9UBU7 674 aaPredicted RBP27.68■■■□□ 2.02
CSNK1D-215ENST00000580784 GNAI1P63096 354 aa27.67■■■□□ 2.02
CSNK1D-215ENST00000580784 SLC10A5Q5PT55 438 aa27.67■■■□□ 2.02
CSNK1D-215ENST00000580784 NLRP10Q86W26 655 aa27.67■■■□□ 2.02
CSNK1D-215ENST00000580784 NLRP3Q96P20 1036 aa27.67■■■□□ 2.02
CSNK1D-215ENST00000580784 DDNO94850 711 aaPredicted RBP27.66■■■□□ 2.02
CSNK1D-215ENST00000580784 CALD1Q05682 793 aaKnown RBP27.66■■■□□ 2.02
CSNK1D-215ENST00000580784 RBM17Q96I25 401 aaKnown RBP27.66■■■□□ 2.02
CSNK1D-215ENST00000580784 CRAMP1Q96RY5 1269 aa27.66■■■□□ 2.02
CSNK1D-215ENST00000580784 ELL2O00472 640 aaPredicted RBP27.65■■■□□ 2.02
CSNK1D-215ENST00000580784 SYNE4Q8N205 404 aa27.65■■■□□ 2.02
CSNK1D-215ENST00000580784 SMC1BQ8NDV3 1235 aa27.65■■■□□ 2.02
CSNK1D-215ENST00000580784 ANKRD13DQ6ZTN6 518 aa27.64■■■□□ 2.02
CSNK1D-215ENST00000580784 PLBD2Q8NHP8 589 aa27.64■■■□□ 2.02
CSNK1D-215ENST00000580784 ZNF428Q96B54 188 aa27.64■■■□□ 2.02
CSNK1D-215ENST00000580784 TCERG1O14776 1098 aaKnown RBP27.63■■■□□ 2.01
CSNK1D-215ENST00000580784 SLC51AQ86UW1 340 aa27.63■■■□□ 2.01
CSNK1D-215ENST00000580784 HYPKQ9NX55 129 aa27.63■■■□□ 2.01
CSNK1D-215ENST00000580784 TRMT112Q9UI30 125 aaKnown RBP27.63■■■□□ 2.01
CSNK1D-215ENST00000580784 SNED1Q8TER0 1413 aa27.63■■■□□ 2.01
CSNK1D-215ENST00000580784 HCLS1P14317 486 aaPredicted RBP27.62■■■□□ 2.01
CSNK1D-215ENST00000580784 IARSP41252 1262 aaKnown RBP27.62■■■□□ 2.01
CSNK1D-215ENST00000580784 CC2D2BQ6DHV5 1058 aa27.62■■■□□ 2.01
CSNK1D-215ENST00000580784 LAMB2P55268 1798 aa27.62■■■□□ 2.01
CSNK1D-215ENST00000580784 RNF123Q5XPI4 1314 aa27.62■■■□□ 2.01
CSNK1D-215ENST00000580784 PSMD1Q99460 953 aa27.61■■■□□ 2.01
CSNK1D-215ENST00000580784 PPEF1O14829 653 aaPredicted RBP27.6■■■□□ 2.01
CSNK1D-215ENST00000580784 HTRA3P83110 453 aa27.6■■■□□ 2.01
CSNK1D-215ENST00000580784 DNAJC5GQ8N7S2 189 aa27.6■■■□□ 2.01
CSNK1D-215ENST00000580784 C8orf58Q8NAV2 365 aa27.6■■■□□ 2.01
CSNK1D-215ENST00000580784 ANP32CO43423 234 aa27.58■■■□□ 2.01
CSNK1D-215ENST00000580784 SH3TC1Q8TE82 1336 aa27.58■■■□□ 2.01
CSNK1D-215ENST00000580784 ZNF541Q9H0D2 1346 aa27.58■■■□□ 2.01
CSNK1D-215ENST00000580784 ATP5J2-PTCD1G3V325 749 aa27.57■■■□□ 2
CSNK1D-215ENST00000580784 ISCA1Q9BUE6 129 aa27.57■■■□□ 2
CSNK1D-215ENST00000580784 PHAXQ9H814 394 aaKnown RBP27.57■■■□□ 2
CSNK1D-215ENST00000580784 MRS2Q9HD23 443 aa27.57■■■□□ 2
CSNK1D-215ENST00000580784 GRIPAP1Q4V328 841 aa27.56■■■□□ 2
CSNK1D-215ENST00000580784 ABCC4O15439 1325 aa27.56■■■□□ 2
CSNK1D-215ENST00000580784 TAF1P21675 1872 aa27.55■■■□□ 2
CSNK1D-215ENST00000580784 FZD9O00144 591 aa27.55■■■□□ 2
CSNK1D-215ENST00000580784 SCN4AP35499 1836 aa27.54■■■□□ 2
CSNK1D-215ENST00000580784 WWC1Q8IX03 1113 aa27.54■■■□□ 2
CSNK1D-215ENST00000580784 JDP2Q8WYK2 163 aa27.54■■■□□ 2
CSNK1D-215ENST00000580784 FAM89AQ96GI7 184 aa27.54■■■□□ 2
CSNK1D-215ENST00000580784 L3MBTL3Q96JM7 780 aaPredicted RBP27.54■■■□□ 2
CSNK1D-215ENST00000580784 ATP6V0A2Q9Y487 856 aa27.54■■■□□ 2
CSNK1D-215ENST00000580784 POTEIP0CG38 1075 aa27.53■■■□□ 2
CSNK1D-215ENST00000580784 POTEJP0CG39 1038 aa27.53■■■□□ 2
CSNK1D-215ENST00000580784 CCDC27Q2M243 656 aa27.53■■■□□ 2
CSNK1D-215ENST00000580784 RIC3Q7Z5B4 369 aa27.53■■■□□ 2
CSNK1D-215ENST00000580784 TSPYL6Q8N831 410 aa27.53■■■□□ 2
CSNK1D-215ENST00000580784 TSR2Q969E8 191 aaKnown RBP27.53■■■□□ 2
CSNK1D-215ENST00000580784 DDX60Q8IY21 1712 aaKnown RBP27.53■■■□□ 2
CSNK1D-215ENST00000580784 COL4A5P29400 1685 aa27.52■■■□□ 2
CSNK1D-215ENST00000580784 BBOX1O75936 387 aa27.52■■■□□ 2
CSNK1D-215ENST00000580784 DDX46Q7L014 1031 aaKnown RBP27.52■■■□□ 2
CSNK1D-215ENST00000580784 TMX4Q9H1E5 349 aaPredicted RBP27.52■■■□□ 2
CSNK1D-215ENST00000580784 IQCA1LA6NCM1 817 aa27.51■■□□□ 1.99
CSNK1D-215ENST00000580784 GOLGA2Q08379 1002 aa27.51■■□□□ 1.99
CSNK1D-215ENST00000580784 RTL5Q5HYW3 569 aaPredicted RBP27.51■■□□□ 1.99
CSNK1D-215ENST00000580784 TRIM28Q13263 835 aaKnown RBP27.5■■□□□ 1.99
CSNK1D-215ENST00000580784 CCDC30Q5VVM6 783 aa27.5■■□□□ 1.99
CSNK1D-215ENST00000580784 LARGE2Q8N3Y3 721 aa27.5■■□□□ 1.99
CSNK1D-215ENST00000580784 TAF1DQ9H5J8 278 aaPredicted RBP27.5■■□□□ 1.99
CSNK1D-215ENST00000580784 CHADLQ6NUI6 762 aa27.49■■□□□ 1.99
CSNK1D-215ENST00000580784 SP8Q8IXZ3 490 aa27.49■■□□□ 1.99
CSNK1D-215ENST00000580784 GRAPQ13588 217 aa27.48■■□□□ 1.99
CSNK1D-215ENST00000580784 GPC2Q8N158 579 aa27.48■■□□□ 1.99
CSNK1D-215ENST00000580784 GRAPLQ8TC17 118 aaPredicted RBP27.48■■□□□ 1.99
CSNK1D-215ENST00000580784 MYD88Q99836 296 aa27.47■■□□□ 1.99
CSNK1D-215ENST00000580784 CHMP4AQ9BY43 222 aa27.47■■□□□ 1.99
CSNK1D-215ENST00000580784 EIF6P56537 245 aaKnown RBP27.46■■□□□ 1.99
CSNK1D-215ENST00000580784 KLRG1Q96E93 195 aa27.46■■□□□ 1.99
CSNK1D-215ENST00000580784 HACL1Q9UJ83 578 aa27.46■■□□□ 1.99
CSNK1D-215ENST00000580784 SALL2Q9Y467 1007 aaPredicted RBP27.46■■□□□ 1.99
CSNK1D-215ENST00000580784 IRS4O14654 1257 aaPredicted RBP27.45■■□□□ 1.98
CSNK1D-215ENST00000580784 PPIP5K2O43314 1243 aa27.45■■□□□ 1.98
CSNK1D-215ENST00000580784 SF3B3Q15393 1217 aaKnown RBP27.45■■□□□ 1.98
CSNK1D-215ENST00000580784 AOC3Q16853 763 aa27.45■■□□□ 1.98
CSNK1D-215ENST00000580784 MPNDQ8N594 471 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms