RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 ANKRD36CQ5JPF3 1778 aa34.67■■■■□ 3.14
LINC00271-207ENST00000580741 C3orf67Q6ZVT6 689 aa34.67■■■■□ 3.14
LINC00271-207ENST00000580741 CRY2Q49AN0 593 aa34.66■■■■□ 3.14
LINC00271-207ENST00000580741 ARFGEF2Q9Y6D5 1785 aa34.66■■■■□ 3.14
LINC00271-207ENST00000580741 LMNB1P20700 586 aa34.65■■■■□ 3.14
LINC00271-207ENST00000580741 RIC1Q4ADV7 1423 aa34.64■■■■□ 3.14
LINC00271-207ENST00000580741 TCERG1O14776 1098 aaKnown RBP34.63■■■■□ 3.13
LINC00271-207ENST00000580741 CCDC30Q5VVM6 783 aa34.63■■■■□ 3.13
LINC00271-207ENST00000580741 OLFM4Q6UX06 510 aa34.63■■■■□ 3.13
LINC00271-207ENST00000580741 SYNE4Q8N205 404 aa34.63■■■■□ 3.13
LINC00271-207ENST00000580741 C7orf43Q8WVR3 580 aa34.63■■■■□ 3.13
LINC00271-207ENST00000580741 FANCIQ9NVI1 1328 aa34.62■■■■□ 3.13
LINC00271-207ENST00000580741 ATP5J2-PTCD1G3V325 749 aa34.62■■■■□ 3.13
LINC00271-207ENST00000580741 C1QTNF8P60827 252 aa34.62■■■■□ 3.13
LINC00271-207ENST00000580741 WDR63Q8IWG1 891 aa34.62■■■■□ 3.13
LINC00271-207ENST00000580741 RPGRQ92834 1020 aaKnown RBP34.62■■■■□ 3.13
LINC00271-207ENST00000580741 GOLGA2Q08379 1002 aa34.61■■■■□ 3.13
LINC00271-207ENST00000580741 TWISTNBQ3B726 338 aaPredicted RBP34.61■■■■□ 3.13
LINC00271-207ENST00000580741 TRMT112Q9UI30 125 aaKnown RBP34.61■■■■□ 3.13
LINC00271-207ENST00000580741 ALDH1B1P30837 517 aa34.6■■■■□ 3.13
LINC00271-207ENST00000580741 SOGA3Q5TF21 947 aa34.6■■■■□ 3.13
LINC00271-207ENST00000580741 RIC3Q7Z5B4 369 aa34.6■■■■□ 3.13
LINC00271-207ENST00000580741 TAOK3Q9H2K8 898 aa34.6■■■■□ 3.13
LINC00271-207ENST00000580741 FER1L6Q2WGJ9 1857 aa34.6■■■■□ 3.13
LINC00271-207ENST00000580741 HCLS1P14317 486 aaPredicted RBP34.59■■■■□ 3.13
LINC00271-207ENST00000580741 ISCA1Q9BUE6 129 aa34.59■■■■□ 3.13
LINC00271-207ENST00000580741 SPINK5Q9NQ38 1064 aaPredicted RBP34.59■■■■□ 3.13
LINC00271-207ENST00000580741 CCDC93Q567U6 631 aa34.58■■■■□ 3.13
LINC00271-207ENST00000580741 SLC10A5Q5PT55 438 aa34.58■■■■□ 3.13
LINC00271-207ENST00000580741 NLRP3Q96P20 1036 aa34.58■■■■□ 3.13
LINC00271-207ENST00000580741 RNF123Q5XPI4 1314 aa34.57■■■■□ 3.13
LINC00271-207ENST00000580741 KIF3CO14782 793 aa34.57■■■■□ 3.12
LINC00271-207ENST00000580741 NMRK2Q9NPI5 230 aa34.57■■■■□ 3.12
LINC00271-207ENST00000580741 SH3TC1Q8TE82 1336 aa34.56■■■■□ 3.12
LINC00271-207ENST00000580741 HOXA10P31260 410 aaPredicted RBP34.56■■■■□ 3.12
LINC00271-207ENST00000580741 CCDC88AQ3V6T2 1871 aa34.56■■■■□ 3.12
LINC00271-207ENST00000580741 LTBP3Q9NS15 1303 aa34.55■■■■□ 3.12
LINC00271-207ENST00000580741 SLC51AQ86UW1 340 aa34.55■■■■□ 3.12
LINC00271-207ENST00000580741 RBM17Q96I25 401 aaKnown RBP34.55■■■■□ 3.12
LINC00271-207ENST00000580741 CHMP4AQ9BY43 222 aa34.55■■■■□ 3.12
LINC00271-207ENST00000580741 MYD88Q99836 296 aa34.53■■■■□ 3.12
LINC00271-207ENST00000580741 STK31Q9BXU1 1019 aa34.53■■■■□ 3.12
LINC00271-207ENST00000580741 TIAM2Q8IVF5 1701 aa34.52■■■■□ 3.12
LINC00271-207ENST00000580741 EXOSC9Q06265 439 aaKnown RBP34.52■■■■□ 3.12
LINC00271-207ENST00000580741 FAM89AQ96GI7 184 aa34.52■■■■□ 3.12
LINC00271-207ENST00000580741 CRAMP1Q96RY5 1269 aa34.52■■■■□ 3.12
LINC00271-207ENST00000580741 ZC3H4Q9UPT8 1303 aaKnown RBP34.52■■■■□ 3.12
LINC00271-207ENST00000580741 RTL5Q5HYW3 569 aaPredicted RBP34.51■■■■□ 3.12
LINC00271-207ENST00000580741 KDM2BQ8NHM5 1336 aa34.5■■■■□ 3.11
LINC00271-207ENST00000580741 DDX58O95786 925 aaKnown RBP34.49■■■■□ 3.11
LINC00271-207ENST00000580741 FKBP4Q02790 459 aaKnown RBP eCLIP34.49■■■■□ 3.11
LINC00271-207ENST00000580741 G2E3Q7L622 706 aa34.49■■■■□ 3.11
LINC00271-207ENST00000580741 PPEF1O14829 653 aaPredicted RBP34.48■■■■□ 3.11
LINC00271-207ENST00000580741 TRIM28Q13263 835 aaKnown RBP34.48■■■■□ 3.11
LINC00271-207ENST00000580741 RTKN2Q8IZC4 609 aa34.48■■■■□ 3.11
LINC00271-207ENST00000580741 ZNF277Q9NRM2 450 aaPredicted RBP34.48■■■■□ 3.11
LINC00271-207ENST00000580741 LAMB2P55268 1798 aa34.47■■■■□ 3.11
LINC00271-207ENST00000580741 SLC4A2P04920 1241 aa34.47■■■■□ 3.11
LINC00271-207ENST00000580741 MAP3K2Q9Y2U5 619 aa34.47■■■■□ 3.11
LINC00271-207ENST00000580741 ABCC4O15439 1325 aa34.47■■■■□ 3.11
LINC00271-207ENST00000580741 VAMP4O75379 141 aa34.46■■■■□ 3.11
LINC00271-207ENST00000580741 METTL22Q9BUU2 404 aaPredicted RBP34.46■■■■□ 3.11
LINC00271-207ENST00000580741 MYH16Q9H6N6 1097 aa34.46■■■■□ 3.11
LINC00271-207ENST00000580741 SNED1Q8TER0 1413 aa34.46■■■■□ 3.11
LINC00271-207ENST00000580741 RRAGCQ9HB90 399 aa34.45■■■■□ 3.11
LINC00271-207ENST00000580741 ZNF521Q96K83 1311 aa34.45■■■■□ 3.11
LINC00271-207ENST00000580741 PI4KAP2A4QPH2 592 aa34.44■■■■□ 3.1
LINC00271-207ENST00000580741 GLTPD2A6NH11 291 aa34.44■■■■□ 3.1
LINC00271-207ENST00000580741 KSR2Q6VAB6 950 aa34.44■■■■□ 3.1
LINC00271-207ENST00000580741 PI4KAP1Q8N8J0 262 aa34.44■■■■□ 3.1
LINC00271-207ENST00000580741 DICER1Q9UPY3 1922 aaKnown RBP34.43■■■■□ 3.1
LINC00271-207ENST00000580741 CCER2I3L3R5 266 aa34.43■■■■□ 3.1
LINC00271-207ENST00000580741 DDX60Q8IY21 1712 aaKnown RBP34.43■■■■□ 3.1
LINC00271-207ENST00000580741 IRS4O14654 1257 aaPredicted RBP34.41■■■■□ 3.1
LINC00271-207ENST00000580741 CC2D2BQ6DHV5 1058 aa34.41■■■■□ 3.1
LINC00271-207ENST00000580741 DDX46Q7L014 1031 aaKnown RBP34.41■■■■□ 3.1
LINC00271-207ENST00000580741 CCDC191Q8NCU4 936 aa34.41■■■■□ 3.1
LINC00271-207ENST00000580741 JARID2Q92833 1246 aaPredicted RBP34.41■■■■□ 3.1
LINC00271-207ENST00000580741 ZBTB38Q8NAP3 1195 aaPredicted RBP34.4■■■■□ 3.1
LINC00271-207ENST00000580741 CWC25Q9NXE8 425 aaPredicted RBP34.4■■■■□ 3.1
LINC00271-207ENST00000580741 FLIIQ13045 1269 aa34.39■■■■□ 3.1
LINC00271-207ENST00000580741 PSMD1Q99460 953 aa34.39■■■■□ 3.1
LINC00271-207ENST00000580741 IARSP41252 1262 aaKnown RBP34.38■■■■□ 3.09
LINC00271-207ENST00000580741 ATP6V0A2Q9Y487 856 aa34.38■■■■□ 3.09
LINC00271-207ENST00000580741 IGKV5-2P06315 115 aa34.37■■■■□ 3.09
LINC00271-207ENST00000580741 GRAPQ13588 217 aa34.37■■■■□ 3.09
LINC00271-207ENST00000580741 GRAPLQ8TC17 118 aaPredicted RBP34.37■■■■□ 3.09
LINC00271-207ENST00000580741 TOMM70O94826 608 aa34.36■■■■□ 3.09
LINC00271-207ENST00000580741 SF3B3Q15393 1217 aaKnown RBP34.36■■■■□ 3.09
LINC00271-207ENST00000580741 DPY19L2Q6NUT2 758 aa34.36■■■■□ 3.09
LINC00271-207ENST00000580741 C16orf71Q8IYS4 520 aaPredicted RBP34.36■■■■□ 3.09
LINC00271-207ENST00000580741 BBOX1O75936 387 aa34.35■■■■□ 3.09
LINC00271-207ENST00000580741 PCCAP05165 728 aaPredicted RBP34.35■■■■□ 3.09
LINC00271-207ENST00000580741 FKBP5Q13451 457 aaPredicted RBP34.35■■■■□ 3.09
LINC00271-207ENST00000580741 TAF1P21675 1872 aa34.35■■■■□ 3.09
LINC00271-207ENST00000580741 NEXNQ0ZGT2 675 aa34.34■■■■□ 3.09
LINC00271-207ENST00000580741 CWF19L2Q2TBE0 894 aaKnown RBP34.34■■■■□ 3.09
LINC00271-207ENST00000580741 TMX4Q9H1E5 349 aaPredicted RBP34.34■■■■□ 3.09
LINC00271-207ENST00000580741 DDNO94850 711 aaPredicted RBP34.33■■■■□ 3.09
LINC00271-207ENST00000580741 CELF1Q92879 486 aaKnown RBP34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms