RNA–Protein interactions for RNA: ENST00000580506.2

RN7SL543P-201, Transcript of RNA, 7SL, cytoplasmic 543, pseudogene, humanhuman

BASIC

Gene RN7SL543P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL543P-201ENST00000580506 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
RN7SL543P-201ENST00000580506 PPP1R42Q7Z4L9 355 aa13.93□□□□□ -0.18
RN7SL543P-201ENST00000580506 MASTLQ96GX5 879 aa13.93□□□□□ -0.18
RN7SL543P-201ENST00000580506 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
RN7SL543P-201ENST00000580506 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
RN7SL543P-201ENST00000580506 RIC3Q7Z5B4 369 aa13.92□□□□□ -0.18
RN7SL543P-201ENST00000580506 C7orf43Q8WVR3 580 aa13.92□□□□□ -0.18
RN7SL543P-201ENST00000580506 PI4KAP2A4QPH2 592 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 E9PSI1 815 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 NPR1P16066 1061 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 HOXA10P31260 410 aaPredicted RBP13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 PRELPP51888 382 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 PI4KAP1Q8N8J0 262 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 CNKSR1Q969H4 720 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
RN7SL543P-201ENST00000580506 C21orf2O43822 256 aa13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 MYD88Q99836 296 aa13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 METTL22Q9BUU2 404 aaPredicted RBP13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 MAP3K2Q9Y2U5 619 aa13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 ADCY9O60503 1353 aa13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
RN7SL543P-201ENST00000580506 RIC1Q4ADV7 1423 aa13.9□□□□□ -0.19
RN7SL543P-201ENST00000580506 IGKV5-2P06315 115 aa13.89□□□□□ -0.19
RN7SL543P-201ENST00000580506 FLIIQ13045 1269 aa13.89□□□□□ -0.19
RN7SL543P-201ENST00000580506 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
RN7SL543P-201ENST00000580506 DLEC1Q9Y238 1755 aa13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 NFKBIEO00221 500 aa13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 DDX58O95786 925 aaKnown RBP13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 RNF123Q5XPI4 1314 aa13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 SH3TC1Q8TE82 1336 aa13.88□□□□□ -0.19
RN7SL543P-201ENST00000580506 RASSF7Q02833 373 aa13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 C9orf131Q5VYM1 1079 aa13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 JARID2Q92833 1246 aaPredicted RBP13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 NLRP3Q96P20 1036 aa13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 ARFGEF1Q9Y6D6 1849 aa13.87□□□□□ -0.19
RN7SL543P-201ENST00000580506 CHD4Q14839 1912 aa13.86□□□□□ -0.19
RN7SL543P-201ENST00000580506 SLX4Q8IY92 1834 aa13.86□□□□□ -0.19
RN7SL543P-201ENST00000580506 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
RN7SL543P-201ENST00000580506 RTL5Q5HYW3 569 aaPredicted RBP13.86□□□□□ -0.19
RN7SL543P-201ENST00000580506 CRAMP1Q96RY5 1269 aa13.86□□□□□ -0.19
RN7SL543P-201ENST00000580506 CWF19L2Q2TBE0 894 aaKnown RBP13.85□□□□□ -0.19
RN7SL543P-201ENST00000580506 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
RN7SL543P-201ENST00000580506 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
RN7SL543P-201ENST00000580506 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
RN7SL543P-201ENST00000580506 ANKRD36CQ5JPF3 1778 aa13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 NEURL1BA8MQ27 555 aa13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 F6X3S4 739 aa13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 SF3B3Q15393 1217 aaKnown RBP13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 MRPL50Q8N5N7 158 aaKnown RBP13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
RN7SL543P-201ENST00000580506 H7C1W4 665 aa13.83□□□□□ -0.2
RN7SL543P-201ENST00000580506 DNAAF4Q8WXU2 420 aa13.83□□□□□ -0.2
RN7SL543P-201ENST00000580506 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
RN7SL543P-201ENST00000580506 ABCC4O15439 1325 aa13.83□□□□□ -0.2
RN7SL543P-201ENST00000580506 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
RN7SL543P-201ENST00000580506 LMNB1P20700 586 aa13.82□□□□□ -0.2
RN7SL543P-201ENST00000580506 CASP7P55210 303 aa13.82□□□□□ -0.2
RN7SL543P-201ENST00000580506 GCKRQ14397 625 aa13.82□□□□□ -0.2
RN7SL543P-201ENST00000580506 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
RN7SL543P-201ENST00000580506 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
RN7SL543P-201ENST00000580506 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
RN7SL543P-201ENST00000580506 CCDC93Q567U6 631 aa13.81□□□□□ -0.2
RN7SL543P-201ENST00000580506 BEND3Q5T5X7 828 aa13.81□□□□□ -0.2
RN7SL543P-201ENST00000580506 SOGA3Q5TF21 947 aa13.81□□□□□ -0.2
RN7SL543P-201ENST00000580506 LINS1Q8NG48 757 aa13.81□□□□□ -0.2
RN7SL543P-201ENST00000580506 BBOX1O75936 387 aa13.8□□□□□ -0.2
RN7SL543P-201ENST00000580506 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
RN7SL543P-201ENST00000580506 TAOK3Q9H2K8 898 aa13.8□□□□□ -0.2
RN7SL543P-201ENST00000580506 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
RN7SL543P-201ENST00000580506 CDHR2Q9BYE9 1310 aa13.8□□□□□ -0.2
RN7SL543P-201ENST00000580506 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 PDE8AO60658 829 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 GRAPQ13588 217 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 DDX46Q7L014 1031 aaKnown RBP13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 ZNF526Q8TF50 670 aaPredicted RBP13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 CELF1Q92879 486 aaKnown RBP13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 SEC31BQ9NQW1 1179 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 COL4A1P02462 1669 aa13.79□□□□□ -0.2
RN7SL543P-201ENST00000580506 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
RN7SL543P-201ENST00000580506 SBF1O95248 1867 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms