RNA–Protein interactions for RNA: ENST00000580175.1

LINC00511-207, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 436 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-207ENST00000580175 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
LINC00511-207ENST00000580175 TSR2Q969E8 191 aaKnown RBP9.73□□□□□ -0.85
LINC00511-207ENST00000580175 ZNF428Q96B54 188 aa9.73□□□□□ -0.85
LINC00511-207ENST00000580175 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
LINC00511-207ENST00000580175 PARP10Q53GL7 1025 aa9.72□□□□□ -0.85
LINC00511-207ENST00000580175 PHAXQ9H814 394 aaKnown RBP9.72□□□□□ -0.85
LINC00511-207ENST00000580175 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
LINC00511-207ENST00000580175 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
LINC00511-207ENST00000580175 ANKRD36CQ5JPF3 1778 aa9.72□□□□□ -0.85
LINC00511-207ENST00000580175 RIC1Q4ADV7 1423 aa9.72□□□□□ -0.85
LINC00511-207ENST00000580175 HOXA10P31260 410 aaPredicted RBP9.71□□□□□ -0.86
LINC00511-207ENST00000580175 SLC10A5Q5PT55 438 aa9.71□□□□□ -0.86
LINC00511-207ENST00000580175 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.86
LINC00511-207ENST00000580175 PLBD2Q8NHP8 589 aa9.71□□□□□ -0.86
LINC00511-207ENST00000580175 UTP14AQ9BVJ6 771 aaKnown RBP9.71□□□□□ -0.86
LINC00511-207ENST00000580175 LTBP3Q9NS15 1303 aa9.71□□□□□ -0.86
LINC00511-207ENST00000580175 SNED1Q8TER0 1413 aa9.71□□□□□ -0.86
LINC00511-207ENST00000580175 TCERG1O14776 1098 aaKnown RBP9.7□□□□□ -0.86
LINC00511-207ENST00000580175 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
LINC00511-207ENST00000580175 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
LINC00511-207ENST00000580175 CCDC93Q567U6 631 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 HSP90AB3PQ58FF7 597 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 TAOK3Q9H2K8 898 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 RRAGCQ9HB90 399 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
LINC00511-207ENST00000580175 HYPKQ9NX55 129 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 TIAM2Q8IVF5 1701 aa9.7□□□□□ -0.86
LINC00511-207ENST00000580175 DICER1Q9UPY3 1922 aaKnown RBP9.7□□□□□ -0.86
LINC00511-207ENST00000580175 GLTPD2A6NH11 291 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 ATP5J2-PTCD1G3V325 749 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 LAMB2P55268 1798 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 IL16Q14005 1332 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
LINC00511-207ENST00000580175 ZC3H4Q9UPT8 1303 aaKnown RBP9.68□□□□□ -0.86
LINC00511-207ENST00000580175 POTECB2RU33 542 aa9.68□□□□□ -0.86
LINC00511-207ENST00000580175 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00511-207ENST00000580175 RPGRQ92834 1020 aaKnown RBP9.68□□□□□ -0.86
LINC00511-207ENST00000580175 FAM89AQ96GI7 184 aa9.68□□□□□ -0.86
LINC00511-207ENST00000580175 CRAMP1Q96RY5 1269 aa9.68□□□□□ -0.86
LINC00511-207ENST00000580175 ZNF277Q9NRM2 450 aaPredicted RBP9.68□□□□□ -0.86
LINC00511-207ENST00000580175 TRMT112Q9UI30 125 aaKnown RBP9.68□□□□□ -0.86
LINC00511-207ENST00000580175 ABCC4O15439 1325 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 KDM2BQ8NHM5 1336 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 SH3TC1Q8TE82 1336 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 FANCIQ9NVI1 1328 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 TOMM70O94826 608 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 TRIM28Q13263 835 aaKnown RBP9.67□□□□□ -0.86
LINC00511-207ENST00000580175 TWISTNBQ3B726 338 aaPredicted RBP9.67□□□□□ -0.86
LINC00511-207ENST00000580175 RTL5Q5HYW3 569 aaPredicted RBP9.67□□□□□ -0.86
LINC00511-207ENST00000580175 CCDC30Q5VVM6 783 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 G2E3Q7L622 706 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 WDR63Q8IWG1 891 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 RBM17Q96I25 401 aaKnown RBP9.67□□□□□ -0.86
LINC00511-207ENST00000580175 TAF1P21675 1872 aa9.67□□□□□ -0.86
LINC00511-207ENST00000580175 DDX60Q8IY21 1712 aaKnown RBP9.67□□□□□ -0.86
LINC00511-207ENST00000580175 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
LINC00511-207ENST00000580175 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
LINC00511-207ENST00000580175 GOLGA2Q08379 1002 aa9.66□□□□□ -0.86
LINC00511-207ENST00000580175 RTKN2Q8IZC4 609 aa9.66□□□□□ -0.86
LINC00511-207ENST00000580175 MYD88Q99836 296 aa9.66□□□□□ -0.86
LINC00511-207ENST00000580175 COL4A1P02462 1669 aa9.66□□□□□ -0.86
LINC00511-207ENST00000580175 COL4A5P29400 1685 aa9.66□□□□□ -0.86
LINC00511-207ENST00000580175 ZNF541Q9H0D2 1346 aa9.65□□□□□ -0.86
LINC00511-207ENST00000580175 VAMP4O75379 141 aa9.65□□□□□ -0.86
LINC00511-207ENST00000580175 HSPA6P17066 643 aa9.65□□□□□ -0.86
LINC00511-207ENST00000580175 IARSP41252 1262 aaKnown RBP9.65□□□□□ -0.86
LINC00511-207ENST00000580175 EXOSC9Q06265 439 aaKnown RBP9.65□□□□□ -0.86
LINC00511-207ENST00000580175 JARID2Q92833 1246 aaPredicted RBP9.65□□□□□ -0.86
LINC00511-207ENST00000580175 YTHDC1Q96MU7 727 aaKnown RBP9.65□□□□□ -0.86
LINC00511-207ENST00000580175 PSMD1Q99460 953 aa9.65□□□□□ -0.86
LINC00511-207ENST00000580175 METTL22Q9BUU2 404 aaPredicted RBP9.65□□□□□ -0.86
LINC00511-207ENST00000580175 WDR90Q96KV7 1748 aa9.65□□□□□ -0.87
LINC00511-207ENST00000580175 ZNF521Q96K83 1311 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
LINC00511-207ENST00000580175 SLC4A2P04920 1241 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 IGKV5-2P06315 115 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 VEGFAP15692 232 aaPredicted RBP9.64□□□□□ -0.87
LINC00511-207ENST00000580175 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.878e-6■□□□□ 10.8
LINC00511-207ENST00000580175 GRAPQ13588 217 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 SF3B3Q15393 1217 aaKnown RBP9.64□□□□□ -0.87
LINC00511-207ENST00000580175 CC2D2BQ6DHV5 1058 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
LINC00511-207ENST00000580175 GRAPLQ8TC17 118 aaPredicted RBP9.64□□□□□ -0.87
LINC00511-207ENST00000580175 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 ATP6V0A2Q9Y487 856 aa9.64□□□□□ -0.87
LINC00511-207ENST00000580175 FZD9O00144 591 aa9.63□□□□□ -0.87
LINC00511-207ENST00000580175 BBOX1O75936 387 aa9.63□□□□□ -0.87
LINC00511-207ENST00000580175 DPY19L2Q6NUT2 758 aa9.63□□□□□ -0.87
LINC00511-207ENST00000580175 DDX46Q7L014 1031 aaKnown RBP9.63□□□□□ -0.87
LINC00511-207ENST00000580175 SP8Q8IXZ3 490 aa9.63□□□□□ -0.87
LINC00511-207ENST00000580175 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms