RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 MAP7D1Q3KQU3 841 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 NSD2O96028 1365 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 ABCC11Q96J66 1382 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 NOL3O60936 208 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 CLCN1P35523 988 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 TMED1Q13445 227 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 CCDC6Q16204 474 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 IQCA1Q86XH1 822 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 CCDC155Q8N6L0 562 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 CEP112Q8N8E3 955 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 NAPBQ9H115 298 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 SAMM50Q9Y512 469 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 ITSN2Q9NZM3 1697 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 A0A087WZG4 1122 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 CCDC117Q8IWD4 279 aaPredicted RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 SP100P23497 879 aaPredicted RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 UTP14CQ5TAP6 766 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 SULT6B1Q6IMI4 303 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 POTEDQ86YR6 584 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 RPGRQ92834 1020 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 HECW1Q76N89 1606 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 ATL3Q6DD88 541 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 U3KPZ7 1027 aaPredicted RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 ARHGAP31Q2M1Z3 1444 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 IDEP14735 1019 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 SSRP1Q08945 709 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 TAF12Q16514 161 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 CEP135Q66GS9 1140 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 CCDC12Q8WUD4 166 aaPredicted RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 PRPF31Q8WWY3 499 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 BTBD11A6QL63 1104 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 APOBRQ0VD83 1088 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 IFI16Q16666 785 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 KIAA0753Q2KHM9 967 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 LRRC27Q9C0I9 530 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 CCDC160A6NGH7 325 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 SNX16P57768 344 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 MAP3K12Q12852 859 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 P3H4Q92791 437 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 RPGRIP1Q96KN7 1286 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 GRPEL1Q9HAV7 217 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 MYOM3Q5VTT5 1437 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 SBNO1A3KN83 1393 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 CCDC172P0C7W6 258 aa5.85□□□□□ -1.47
NF1-219ENST00000579081 CKAP4Q07065 602 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 RNF41Q9H4P4 317 aaPredicted RBP5.85□□□□□ -1.47
NF1-219ENST00000579081 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 PSMD7P51665 324 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 CAMK4Q16566 473 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 RPAP2Q8IXW5 612 aaPredicted RBP5.84□□□□□ -1.47
NF1-219ENST00000579081 ARFGAP2Q8N6H7 521 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 IL1RAPL2Q9NP60 686 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 PHACTR2O75167 634 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 SLC5A1P13866 664 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 RFX1P22670 979 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 PPP4R3BQ5MIZ7 849 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 TMEM132EQ6IEE7 984 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 DDX46Q7L014 1031 aaKnown RBP5.84□□□□□ -1.47
NF1-219ENST00000579081 DTNBP1Q96EV8 351 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 TTC14Q96N46 770 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 ANKRD27Q96NW4 1050 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 SMC6Q96SB8 1091 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 PLVAPQ9BX97 442 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 LDHCP07864 332 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 GRM1Q13255 1194 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 CCDC63Q8NA47 563 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 KIF18AQ8NI77 898 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 KIAA1524Q8TCG1 905 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 TCP11L1Q9NUJ3 509 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 ODF2LQ9ULJ1 636 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 SLC12A7Q9Y666 1083 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 NUP160Q12769 1436 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 GOLIM4O00461 696 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 BCAR3O75815 825 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 OSCARQ8IYS5 282 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 TMX1Q9H3N1 280 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 TBCAO75347 108 aaKnown RBP5.84□□□□□ -1.47
NF1-219ENST00000579081 USP37Q86T82 979 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 CKAP2LQ8IYA6 745 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 C8orf76Q96K31 380 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 CCDC77Q9BR77 488 aa5.84□□□□□ -1.47
NF1-219ENST00000579081 ZNF692Q9BU19 519 aaPredicted RBP5.84□□□□□ -1.47
NF1-219ENST00000579081 NSRP1Q9H0G5 558 aaKnown RBP5.84□□□□□ -1.47
NF1-219ENST00000579081 CNNM3Q8NE01 707 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 IPO4Q8TEX9 1081 aaKnown RBP5.84□□□□□ -1.48
NF1-219ENST00000579081 TBC1D5Q92609 795 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 TCHPQ9BT92 498 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 MMRN2Q9H8L6 949 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 PTPRGP23470 1445 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 HMGXB3Q12766 1538 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 C6orf229H3BNL8 230 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 PPP2R5EQ16537 467 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 SEPT14Q6ZU15 432 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 CCDC114Q96M63 670 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 PPP1R9BQ96SB3 815 aa5.84□□□□□ -1.48
NF1-219ENST00000579081 CCDC14Q49A88 953 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms