RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 HOXA10P31260 410 aaPredicted RBP15.04■□□□□ -0
SSH2-208ENST00000579040 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
SSH2-208ENST00000579040 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
SSH2-208ENST00000579040 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
SSH2-208ENST00000579040 CALD1Q05682 793 aaKnown RBP15.03■□□□□ -0
SSH2-208ENST00000579040 KRT24Q2M2I5 525 aa15.03■□□□□ -0
SSH2-208ENST00000579040 CC2D2BQ6DHV5 1058 aa15.03■□□□□ -0
SSH2-208ENST00000579040 COPS6Q7L5N1 327 aa15.03■□□□□ -0
SSH2-208ENST00000579040 XAGE3Q8WTP9 111 aa15.03■□□□□ -0
SSH2-208ENST00000579040 SNED1Q8TER0 1413 aa15.02■□□□□ -0
SSH2-208ENST00000579040 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
SSH2-208ENST00000579040 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
SSH2-208ENST00000579040 NECTIN2Q92692 538 aa15.02■□□□□ -0
SSH2-208ENST00000579040 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
SSH2-208ENST00000579040 UTP14AQ9BVJ6 771 aaKnown RBP15.02■□□□□ -0
SSH2-208ENST00000579040 POTECB2RU33 542 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 APAF1O14727 1248 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 ZNF853P0CG23 659 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 AIMP1Q12904 312 aaKnown RBP15.01□□□□□ -0.01
SSH2-208ENST00000579040 SLC10A5Q5PT55 438 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
SSH2-208ENST00000579040 PSMD1Q99460 953 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 MBIPQ9NS73 344 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
SSH2-208ENST00000579040 DBF4Q9UBU7 674 aaPredicted RBP15.01□□□□□ -0.01
SSH2-208ENST00000579040 GNAI1P63096 354 aa15□□□□□ -0.01
SSH2-208ENST00000579040 TCIRG1Q13488 830 aa15□□□□□ -0.01
SSH2-208ENST00000579040 OLFM4Q6UX06 510 aa15□□□□□ -0.01
SSH2-208ENST00000579040 NLRP3Q96P20 1036 aa15□□□□□ -0.01
SSH2-208ENST00000579040 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
SSH2-208ENST00000579040 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
SSH2-208ENST00000579040 DUSP27Q5VZP5 1158 aa14.99□□□□□ -0.01
SSH2-208ENST00000579040 NLRP10Q86W26 655 aa14.99□□□□□ -0.01
SSH2-208ENST00000579040 PLBD2Q8NHP8 589 aa14.99□□□□□ -0.01
SSH2-208ENST00000579040 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
SSH2-208ENST00000579040 HYPKQ9NX55 129 aa14.99□□□□□ -0.01
SSH2-208ENST00000579040 DDX60Q8IY21 1712 aaKnown RBP14.98□□□□□ -0.01
SSH2-208ENST00000579040 IQCA1LA6NCM1 817 aa14.98□□□□□ -0.01
SSH2-208ENST00000579040 DDNO94850 711 aaPredicted RBP14.98□□□□□ -0.01
SSH2-208ENST00000579040 SYNE4Q8N205 404 aa14.98□□□□□ -0.01
SSH2-208ENST00000579040 DNAJC5GQ8N7S2 189 aa14.98□□□□□ -0.01
SSH2-208ENST00000579040 SH3TC1Q8TE82 1336 aa14.97□□□□□ -0.01
SSH2-208ENST00000579040 PPEF1O14829 653 aaPredicted RBP14.97□□□□□ -0.01
SSH2-208ENST00000579040 ANKRD13DQ6ZTN6 518 aa14.97□□□□□ -0.01
SSH2-208ENST00000579040 C3orf67Q6ZVT6 689 aa14.97□□□□□ -0.01
SSH2-208ENST00000579040 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
SSH2-208ENST00000579040 TRMT112Q9UI30 125 aaKnown RBP14.97□□□□□ -0.01
SSH2-208ENST00000579040 FZD9O00144 591 aa14.96□□□□□ -0.01
SSH2-208ENST00000579040 JDP2Q8WYK2 163 aa14.96□□□□□ -0.01
SSH2-208ENST00000579040 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
SSH2-208ENST00000579040 ZNF541Q9H0D2 1346 aa14.95□□□□□ -0.02
SSH2-208ENST00000579040 TAF1P21675 1872 aa14.95□□□□□ -0.02
SSH2-208ENST00000579040 ATP6V0A2Q9Y487 856 aa14.95□□□□□ -0.02
SSH2-208ENST00000579040 LRRC37AA6NMS7 1700 aa14.95□□□□□ -0.02
SSH2-208ENST00000579040 CACNA1FO60840 1977 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 ABCC4O15439 1325 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 ZNF316A6NFI3 1004 aaPredicted RBP14.94□□□□□ -0.02
SSH2-208ENST00000579040 BBOX1O75936 387 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 HCLS1P14317 486 aaPredicted RBP14.94□□□□□ -0.02
SSH2-208ENST00000579040 CCDC27Q2M243 656 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 KLRG1Q96E93 195 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 ISCA1Q9BUE6 129 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 VPS33BQ9H267 617 aa14.94□□□□□ -0.02
SSH2-208ENST00000579040 COL4A5P29400 1685 aa14.93□□□□□ -0.02
SSH2-208ENST00000579040 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
SSH2-208ENST00000579040 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
SSH2-208ENST00000579040 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
SSH2-208ENST00000579040 DDX46Q7L014 1031 aaKnown RBP14.93□□□□□ -0.02
SSH2-208ENST00000579040 GPC2Q8N158 579 aa14.93□□□□□ -0.02
SSH2-208ENST00000579040 TAF1DQ9H5J8 278 aaPredicted RBP14.93□□□□□ -0.02
SSH2-208ENST00000579040 ADAMTSL1Q8N6G6 1762 aa14.93□□□□□ -0.02
SSH2-208ENST00000579040 EIF6P56537 245 aaKnown RBP14.92□□□□□ -0.02
SSH2-208ENST00000579040 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 TMC4Q7Z404 712 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 LDHDQ86WU2 507 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 SP8Q8IXZ3 490 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 LARGE2Q8N3Y3 721 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 SUPT20HQ8NEM7 779 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 HACL1Q9UJ83 578 aa14.92□□□□□ -0.02
SSH2-208ENST00000579040 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
SSH2-208ENST00000579040 ANP32CO43423 234 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 HTRA3P83110 453 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 GRAPQ13588 217 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 CCDC30Q5VVM6 783 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 RIC3Q7Z5B4 369 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 JMYQ8N9B5 988 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 C8orf58Q8NAV2 365 aa14.91□□□□□ -0.02
SSH2-208ENST00000579040 GRAPLQ8TC17 118 aaPredicted RBP14.91□□□□□ -0.02
SSH2-208ENST00000579040 RTFDC1Q9BY42 306 aaPredicted RBP14.91□□□□□ -0.02
SSH2-208ENST00000579040 ATP5J2-PTCD1G3V325 749 aa14.9□□□□□ -0.02
SSH2-208ENST00000579040 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
SSH2-208ENST00000579040 PNMA8AQ86V59 439 aaPredicted RBP14.9□□□□□ -0.02
SSH2-208ENST00000579040 NIM1KQ8IY84 436 aa14.9□□□□□ -0.02
SSH2-208ENST00000579040 MRS2Q9HD23 443 aa14.9□□□□□ -0.02
SSH2-208ENST00000579040 IL16Q14005 1332 aa14.9□□□□□ -0.02
SSH2-208ENST00000579040 PPIP5K2O43314 1243 aa14.89□□□□□ -0.03
SSH2-208ENST00000579040 DDX58O95786 925 aaKnown RBP14.89□□□□□ -0.03
SSH2-208ENST00000579040 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms