RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 C1orf167Q5SNV9 1468 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 CD163L1Q9NR16 1453 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 PRR36Q9H6K5 1346 aa5.44□□□□□ -1.54
SMARCE1-215ENST00000578995 VASH1Q7L8A9 365 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-215ENST00000578995 TESK2Q96S53 571 aa5.43□□□□□ -1.54
SMARCE1-215ENST00000578995 MSH6P52701 1360 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 USP47Q96K76 1375 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 MED1Q15648 1581 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 OIP5O43482 229 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 COL8A1P27658 744 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 CTSOP43234 321 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 SNRPNP63162 240 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 CBLBQ13191 982 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 NBPF11Q86T75 865 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 PROSER2Q86WR7 435 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 CFAP44Q96MT7 982 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 PRAM1Q96QH2 718 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 ZFP64Q9NPA5 681 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 STK26Q9P289 416 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 TRAK1Q9UPV9 953 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 LTN1O94822 1766 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 RGPD5Q99666 1765 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 DISP3Q9P2K9 1392 aa5.42□□□□□ -1.54
SMARCE1-215ENST00000578995 SPDYE5A6NIY4 337 aa5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 C1QTNF9BB2RNN3 333 aa5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 BCANQ96GW7 911 aa5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 C19orf44Q9H6X5 657 aa5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 POLMQ9NP87 494 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 NSFL1CQ9UNZ2 370 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 COL18A1P39060 1754 aa5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 CENPJQ9HC77 1338 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-215ENST00000578995 PLCH1Q4KWH8 1693 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 SSH2Q76I76 1423 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 NRAPQ86VF7 1730 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 WNK3Q9BYP7 1800 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 MDM2Q00987 491 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 PAXIP1Q6ZW49 1069 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 RNF217Q8TC41 542 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 C1QTNF2Q9BXJ5 285 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 CARD11Q9BXL7 1154 aa5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 CUEDC1Q9NWM3 386 aaPredicted RBP5.4□□□□□ -1.54
SMARCE1-215ENST00000578995 MINK1Q8N4C8 1332 aaPredicted RBP5.4□□□□□ -1.55
SMARCE1-215ENST00000578995 POLR3AO14802 1390 aaPredicted RBP5.4□□□□□ -1.55
SMARCE1-215ENST00000578995 EIF3AQ14152 1382 aaKnown RBP5.4□□□□□ -1.55
SMARCE1-215ENST00000578995 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.4□□□□□ -1.55
SMARCE1-215ENST00000578995 CPSF1Q10570 1443 aaKnown RBP5.4□□□□□ -1.55
SMARCE1-215ENST00000578995 WASLO00401 505 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 PIK3R2O00459 728 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 GRIN2CQ14957 1233 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 ARTNQ5T4W7 220 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 LYPD8Q6UX82 237 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 BRINP3Q76B58 766 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 ZNF837Q96EG3 531 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 INSM2Q96T92 566 aaPredicted RBP5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 LMO7Q8WWI1 1683 aa5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 MAP2P11137 1827 aaKnown RBP5.39□□□□□ -1.55
SMARCE1-215ENST00000578995 SLIT3O75094 1523 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 NWD2Q9ULI1 1742 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 RGPD2P0DJD1 1756 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 ST20-MTHFSA0A0A6YYL1 179 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 GPR25O00155 361 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 MTMR2Q13614 643 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 SAFB2Q14151 953 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 PPP1R26Q5T8A7 1209 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 CD163Q86VB7 1156 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 TRMT44Q8IYL2 757 aaKnown RBP5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 TRIM22Q8IYM9 498 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 FBXO41Q8TF61 875 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 ORAI2Q96SN7 254 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 HIRIP3Q9BW71 556 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 PPIP5K1Q6PFW1 1433 aa5.38□□□□□ -1.55
SMARCE1-215ENST00000578995 LRP6O75581 1613 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 PEAK1Q9H792 1746 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 COBLO75128 1261 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 HSPA5P11021 654 aaKnown RBP5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 DOC2BQ14184 412 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 TRERF1Q96PN7 1200 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 RRAGCQ9HB90 399 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 SLAIN2Q9P270 581 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 USP6P35125 1406 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 NFAT5O94916 1531 aa5.37□□□□□ -1.55
SMARCE1-215ENST00000578995 UBAP1LF5GYI3 381 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 F12P00748 615 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 MX2P20592 715 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 RELBQ01201 579 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 ARMC2Q8NEN0 867 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 PUS7Q96PZ0 661 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 CDK19Q9BWU1 502 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 OXCT2Q9BYC2 517 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 POGKQ9P215 609 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 MAP10Q9P2G4 905 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 CAMTA1Q9Y6Y1 1673 aa5.36□□□□□ -1.55
SMARCE1-215ENST00000578995 VIRMAQ69YN4 1812 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-215ENST00000578995 COL14A1Q05707 1796 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-215ENST00000578995 OVOS2A0A0J9YW53 1432 aa5.35□□□□□ -1.55
SMARCE1-215ENST00000578995 TNS3Q68CZ2 1445 aa5.35□□□□□ -1.55
SMARCE1-215ENST00000578995 OVOS2Q6IE36 1432 aa5.35□□□□□ -1.55
SMARCE1-215ENST00000578995 A0A1W2PP64 1363 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms