RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 NUDT8Q8WV74 236 aa8.13□□□□□ -1.11
TRAPPC8-206ENST00000578886 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
TRAPPC8-206ENST00000578886 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
TRAPPC8-206ENST00000578886 SLC6A14Q9UN76 642 aa8.13□□□□□ -1.11
TRAPPC8-206ENST00000578886 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 ATP9BO43861 1147 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 AFF1P51825 1210 aaKnown RBP8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 GTF2IP78347 998 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 ILDR2Q71H61 639 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 RHPN1Q8TCX5 695 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 BHMTQ93088 406 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 NOD1Q9Y239 953 aa8.12□□□□□ -1.11
TRAPPC8-206ENST00000578886 SSTR4P31391 388 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 IREB2P48200 963 aaKnown RBP8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 CD97P48960 835 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 PLEKHM2Q8IWE5 1019 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 DMRTC2Q8IXT2 367 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 CEP63Q96MT8 703 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 ZNF232Q9UNY5 417 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
TRAPPC8-206ENST00000578886 ARID1BQ8NFD5 2236 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC8-206ENST00000578886 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC8-206ENST00000578886 NOS3P29474 1203 aa8.1□□□□□ -1.11
TRAPPC8-206ENST00000578886 FZD5Q13467 585 aa8.1□□□□□ -1.11
TRAPPC8-206ENST00000578886 DTWD1Q8N5C7 304 aa8.1□□□□□ -1.11
TRAPPC8-206ENST00000578886 CLDN10P78369 228 aa8.09□□□□□ -1.11
TRAPPC8-206ENST00000578886 PSAPL1Q6NUJ1 521 aa8.09□□□□□ -1.11
TRAPPC8-206ENST00000578886 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
TRAPPC8-206ENST00000578886 TFIP11Q9UBB9 837 aaKnown RBP8.09□□□□□ -1.11
TRAPPC8-206ENST00000578886 RNF114Q9Y508 228 aa8.09□□□□□ -1.11
TRAPPC8-206ENST00000578886 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 TAL1P17542 331 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 FSTP19883 344 aa8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 TYRO3Q06418 890 aa8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 SLC9A9Q8IVB4 645 aa8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 CALR3Q96L12 384 aaKnown RBP8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 ZNF358Q9NW07 568 aa8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 ZNF777Q9ULD5 760 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 MAFBQ9Y5Q3 323 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC8-206ENST00000578886 SERTM1A2A2V5 107 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 EPHA4P54764 986 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 HSH2DQ96JZ2 352 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 IGFLR1Q9H665 355 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 EFCC1Q9HA90 598 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 NAGPAQ9UK23 515 aa8.07□□□□□ -1.12
TRAPPC8-206ENST00000578886 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC8-206ENST00000578886 PSME1Q06323 249 aa8.06□□□□□ -1.12
TRAPPC8-206ENST00000578886 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
TRAPPC8-206ENST00000578886 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
TRAPPC8-206ENST00000578886 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
TRAPPC8-206ENST00000578886 SH3PXD2AQ5TCZ1 1133 aa8.05□□□□□ -1.12
TRAPPC8-206ENST00000578886 C1orf53Q5VUE5 145 aa8.05□□□□□ -1.12
TRAPPC8-206ENST00000578886 OAS3Q9Y6K5 1087 aaKnown RBP8.05□□□□□ -1.12
TRAPPC8-206ENST00000578886 SFI1A8K8P3 1242 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 DKK1O94907 266 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 GP2P55259 537 aaKnown RBP8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 IGF2-ASQ6U949 168 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 TRIM50Q86XT4 487 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 OGFOD1Q8N543 542 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 TPCN2Q8NHX9 752 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 KRTAP4-9Q9BYQ8 210 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 DNAJB12Q9NXW2 375 aaKnown RBP8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 GTF3C3Q9Y5Q9 886 aa8.04□□□□□ -1.12
TRAPPC8-206ENST00000578886 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC8-206ENST00000578886 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
TRAPPC8-206ENST00000578886 CCDC102BQ68D86 513 aa8.03□□□□□ -1.12
TRAPPC8-206ENST00000578886 ZNF594Q96JF6 807 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC8-206ENST00000578886 HIRAP54198 1017 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC8-206ENST00000578886 CFAP70Q5T0N1 1121 aa8.02□□□□□ -1.13
TRAPPC8-206ENST00000578886 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC8-206ENST00000578886 DZIP1LQ8IYY4 767 aaKnown RBP8.02□□□□□ -1.13
TRAPPC8-206ENST00000578886 TNS4Q8IZW8 715 aa8.02□□□□□ -1.13
TRAPPC8-206ENST00000578886 ATP1A2P50993 1020 aa8.01□□□□□ -1.13
TRAPPC8-206ENST00000578886 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
TRAPPC8-206ENST00000578886 SIX5Q8N196 739 aa8.01□□□□□ -1.13
TRAPPC8-206ENST00000578886 LARGE2Q8N3Y3 721 aa8.01□□□□□ -1.13
TRAPPC8-206ENST00000578886 SUSD3Q96L08 255 aa8.01□□□□□ -1.13
TRAPPC8-206ENST00000578886 PTCD1O75127 700 aaKnown RBP8□□□□□ -1.13
TRAPPC8-206ENST00000578886 LMOD1P29536 600 aaPredicted RBP8□□□□□ -1.13
TRAPPC8-206ENST00000578886 CRTC2Q53ET0 693 aaPredicted RBP8□□□□□ -1.13
TRAPPC8-206ENST00000578886 ZNF280CQ8ND82 737 aa8□□□□□ -1.13
TRAPPC8-206ENST00000578886 PHACTR1Q9C0D0 580 aa8□□□□□ -1.13
TRAPPC8-206ENST00000578886 ZMYND15Q9H091 742 aa8□□□□□ -1.13
TRAPPC8-206ENST00000578886 FRRS1LQ9P0K9 344 aa8□□□□□ -1.13
TRAPPC8-206ENST00000578886 CHMP3Q9Y3E7 222 aa8□□□□□ -1.13
TRAPPC8-206ENST00000578886 GSC2O15499 205 aa7.99□□□□□ -1.13
TRAPPC8-206ENST00000578886 RASA1P20936 1047 aa7.99□□□□□ -1.13
TRAPPC8-206ENST00000578886 GRIK5Q16478 980 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms