RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TRIM28Q13263 835 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 PDE3AQ14432 1141 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CCDC191Q8NCU4 936 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CWC25Q9NXE8 425 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 IBTKQ9P2D0 1353 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ATP5J2-PTCD1G3V325 749 aa14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 GPTP24298 496 aa14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TBC1D9BQ66K14 1250 aa14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ISCA1Q9BUE6 129 aa14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-210ENST00000578733 GRIN3BO60391 1043 aa14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 BEND3Q5T5X7 828 aa14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CLUAP1Q96AJ1 413 aa14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 C9orf78Q9NZ63 289 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-210ENST00000578733 DDX60Q8IY21 1712 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 KIF13BQ9NQT8 1826 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 PLIN1O60240 522 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 MMP10P09238 476 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TM4SF1P30408 202 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ST5P78524 1137 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NFIXQ14938 502 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 INTS3Q68E01 1043 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ITPRIPQ8IWB1 547 aa14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 UTP14AQ9BVJ6 771 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SERPINB2P05120 415 aa14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 IGKV5-2P06315 115 aa14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 CWF19L2Q2TBE0 894 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 CNBD1Q8NA66 436 aa14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 TRMT112Q9UI30 125 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 DDX19BQ9UMR2 479 aa14.2□□□□□ -0.14
CDK5RAP3-210ENST00000578733 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 SH3TC1Q8TE82 1336 aa14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 PCCAP05165 728 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 GCKRQ14397 625 aa14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 TMEM57Q8N5G2 664 aa14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 ZBTB38Q8NAP3 1195 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-210ENST00000578733 ANKRD31Q8N7Z5 1873 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 GRM8O00222 908 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 POLRMTO00411 1230 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 NEFLP07196 543 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 GNAI3P08754 354 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 MVPQ14764 893 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 SUSD4Q5VX71 490 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 PANK1Q8TE04 598 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 CACNA1SQ13698 1873 aa14.18□□□□□ -0.14
CDK5RAP3-210ENST00000578733 NTSR2O95665 410 aa14.17□□□□□ -0.14
CDK5RAP3-210ENST00000578733 DLEC1Q9Y238 1755 aa14.17□□□□□ -0.14
CDK5RAP3-210ENST00000578733 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
CDK5RAP3-210ENST00000578733 RIC1Q4ADV7 1423 aa14.16□□□□□ -0.14
CDK5RAP3-210ENST00000578733 UBTFL1P0CB47 393 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-210ENST00000578733 DDR1Q08345 913 aa14.16□□□□□ -0.14
CDK5RAP3-210ENST00000578733 TNNQ9UQP3 1299 aa14.16□□□□□ -0.14
CDK5RAP3-210ENST00000578733 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
CDK5RAP3-210ENST00000578733 RLBP1P12271 317 aa14.15□□□□□ -0.14
CDK5RAP3-210ENST00000578733 PRR5LQ6MZQ0 368 aa14.15□□□□□ -0.14
CDK5RAP3-210ENST00000578733 UBE3BQ7Z3V4 1068 aa14.15□□□□□ -0.14
CDK5RAP3-210ENST00000578733 FAM89AQ96GI7 184 aa14.15□□□□□ -0.14
CDK5RAP3-210ENST00000578733 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
CDK5RAP3-210ENST00000578733 UTYO14607 1347 aa14.15□□□□□ -0.15
CDK5RAP3-210ENST00000578733 TNRC6CQ9HCJ0 1690 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 H7C1W4 665 aa14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 IRS4O14654 1257 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 PDE6BP35913 854 aa14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 AAMPQ13685 434 aa14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 NUTM1Q86Y26 1132 aa14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 NLGN2Q8NFZ4 835 aa14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 NLRP3Q96P20 1036 aa14.14□□□□□ -0.15
CDK5RAP3-210ENST00000578733 SPEF2Q9C093 1822 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 GNAI2P04899 355 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 ERFEQ4G0M1 354 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 RTL5Q5HYW3 569 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 C20orf194Q5TEA3 1177 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 BRIP1Q9BX63 1249 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 USP44Q9H0E7 712 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
CDK5RAP3-210ENST00000578733 COL11A2P13942 1736 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 PDE8AO60658 829 aa14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 YBX3P16989 372 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 HSPA6P17066 643 aa14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 GPBP1L1Q9HC44 474 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-210ENST00000578733 ZBTB7BO15156 539 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-210ENST00000578733 NBPF7P0C2Y1 421 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-210ENST00000578733 BRCA1P38398 1863 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-210ENST00000578733 MEIS3Q99687 375 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms