RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 NUTM1Q86Y26 1132 aa30.28■■■□□ 2.44
ERBB2-209ENST00000578709 RIC1Q4ADV7 1423 aa30.28■■■□□ 2.44
ERBB2-209ENST00000578709 ABCC12Q96J65 1359 aa30.28■■■□□ 2.44
ERBB2-209ENST00000578709 CHRNA5P30532 468 aa30.27■■■□□ 2.44
ERBB2-209ENST00000578709 DNAAF4Q8WXU2 420 aa30.27■■■□□ 2.44
ERBB2-209ENST00000578709 DLEC1Q9Y238 1755 aa30.26■■■□□ 2.44
ERBB2-209ENST00000578709 KLRG2A4D1S0 409 aaPredicted RBP30.26■■■□□ 2.43
ERBB2-209ENST00000578709 RARSP54136 660 aaKnown RBP30.26■■■□□ 2.43
ERBB2-209ENST00000578709 BRPF1P55201 1214 aaPredicted RBP30.26■■■□□ 2.43
ERBB2-209ENST00000578709 CCDC191Q8NCU4 936 aa30.26■■■□□ 2.43
ERBB2-209ENST00000578709 BCL2L13Q9BXK5 485 aa30.26■■■□□ 2.43
ERBB2-209ENST00000578709 SMC4Q9NTJ3 1288 aa30.26■■■□□ 2.43
ERBB2-209ENST00000578709 NEXNQ0ZGT2 675 aa30.25■■■□□ 2.43
ERBB2-209ENST00000578709 C2CD5Q86YS7 1000 aa30.25■■■□□ 2.43
ERBB2-209ENST00000578709 TRMT112Q9UI30 125 aaKnown RBP30.25■■■□□ 2.43
ERBB2-209ENST00000578709 GOLGB1Q14789 3259 aaKnown RBP30.24■■■□□ 2.43
ERBB2-209ENST00000578709 H0YIN7 160 aa30.24■■■□□ 2.43
ERBB2-209ENST00000578709 IGKV5-2P06315 115 aa30.24■■■□□ 2.43
ERBB2-209ENST00000578709 SLC10A5Q5PT55 438 aa30.24■■■□□ 2.43
ERBB2-209ENST00000578709 COL11A2P13942 1736 aaPredicted RBP30.24■■■□□ 2.43
ERBB2-209ENST00000578709 PTPRCP08575 1304 aa30.23■■■□□ 2.43
ERBB2-209ENST00000578709 SH3TC1Q8TE82 1336 aa30.23■■■□□ 2.43
ERBB2-209ENST00000578709 CWC25Q9NXE8 425 aaPredicted RBP30.22■■■□□ 2.43
ERBB2-209ENST00000578709 PIM2Q9P1W9 311 aa30.22■■■□□ 2.43
ERBB2-209ENST00000578709 TNRC6CQ9HCJ0 1690 aaKnown RBP30.22■■■□□ 2.43
ERBB2-209ENST00000578709 F6X3S4 739 aa30.21■■■□□ 2.43
ERBB2-209ENST00000578709 SRGNP10124 158 aa30.21■■■□□ 2.43
ERBB2-209ENST00000578709 NEURL1BA8MQ27 555 aa30.2■■■□□ 2.43
ERBB2-209ENST00000578709 SYNE4Q8N205 404 aa30.2■■■□□ 2.43
ERBB2-209ENST00000578709 LINS1Q8NG48 757 aa30.2■■■□□ 2.43
ERBB2-209ENST00000578709 DCAF8L1A6NGE4 600 aa30.19■■■□□ 2.42
ERBB2-209ENST00000578709 YBX3P16989 372 aaKnown RBP eCLIP30.19■■■□□ 2.42
ERBB2-209ENST00000578709 GPR162Q16538 588 aa30.19■■■□□ 2.42
ERBB2-209ENST00000578709 CRY2Q49AN0 593 aa30.19■■■□□ 2.42
ERBB2-209ENST00000578709 ZBTB38Q8NAP3 1195 aaPredicted RBP30.19■■■□□ 2.42
ERBB2-209ENST00000578709 CWF19L2Q2TBE0 894 aaKnown RBP30.18■■■□□ 2.42
ERBB2-209ENST00000578709 FAM89AQ96GI7 184 aa30.18■■■□□ 2.42
ERBB2-209ENST00000578709 PCCAP05165 728 aaPredicted RBP30.17■■■□□ 2.42
ERBB2-209ENST00000578709 BEND3Q5T5X7 828 aa30.17■■■□□ 2.42
ERBB2-209ENST00000578709 STYK1Q6J9G0 422 aa30.17■■■□□ 2.42
ERBB2-209ENST00000578709 MASTLQ96GX5 879 aa30.17■■■□□ 2.42
ERBB2-209ENST00000578709 WWC3Q9ULE0 1092 aa30.17■■■□□ 2.42
ERBB2-209ENST00000578709 DALRD3Q5D0E6 543 aaKnown RBP30.16■■■□□ 2.42
ERBB2-209ENST00000578709 PELP1Q8IZL8 1130 aaKnown RBP30.16■■■□□ 2.42
ERBB2-209ENST00000578709 HCLS1P14317 486 aaPredicted RBP30.15■■■□□ 2.42
ERBB2-209ENST00000578709 NPR1P16066 1061 aa30.15■■■□□ 2.42
ERBB2-209ENST00000578709 GCKRQ14397 625 aa30.15■■■□□ 2.42
ERBB2-209ENST00000578709 C3orf67Q6ZVT6 689 aa30.15■■■□□ 2.42
ERBB2-209ENST00000578709 TTLL6Q8N841 843 aa30.15■■■□□ 2.42
ERBB2-209ENST00000578709 NLRP3Q96P20 1036 aa30.15■■■□□ 2.42
ERBB2-209ENST00000578709 DDX60Q8IY21 1712 aaKnown RBP30.15■■■□□ 2.42
ERBB2-209ENST00000578709 ARFGEF1Q9Y6D6 1849 aa30.15■■■□□ 2.42
ERBB2-209ENST00000578709 LAMB2P55268 1798 aa30.14■■■□□ 2.42
ERBB2-209ENST00000578709 ZNF622Q969S3 477 aaKnown RBP eCLIP30.14■■■□□ 2.42
ERBB2-209ENST00000578709 NOB1Q9ULX3 412 aaKnown RBP30.14■■■□□ 2.42
ERBB2-209ENST00000578709 BCS1LQ9Y276 419 aa30.14■■■□□ 2.42
ERBB2-209ENST00000578709 KIF16BQ96L93 1317 aa30.14■■■□□ 2.42
ERBB2-209ENST00000578709 CNKSR1Q969H4 720 aa30.13■■■□□ 2.41
ERBB2-209ENST00000578709 IRS4O14654 1257 aaPredicted RBP30.12■■■□□ 2.41
ERBB2-209ENST00000578709 GRIN3BO60391 1043 aa30.12■■■□□ 2.41
ERBB2-209ENST00000578709 HOXA10P31260 410 aaPredicted RBP30.12■■■□□ 2.41
ERBB2-209ENST00000578709 RTL5Q5HYW3 569 aaPredicted RBP30.12■■■□□ 2.41
ERBB2-209ENST00000578709 CDHR2Q9BYE9 1310 aa30.12■■■□□ 2.41
ERBB2-209ENST00000578709 H7C1W4 665 aa30.11■■■□□ 2.41
ERBB2-209ENST00000578709 BCAR3O75815 825 aa30.11■■■□□ 2.41
ERBB2-209ENST00000578709 ALDH1L1O75891 902 aa30.11■■■□□ 2.41
ERBB2-209ENST00000578709 HSP90B1P14625 803 aaKnown RBP30.11■■■□□ 2.41
ERBB2-209ENST00000578709 SLC4A10Q6U841 1118 aa30.11■■■□□ 2.41
ERBB2-209ENST00000578709 ARHGAP45Q92619 1136 aa30.11■■■□□ 2.41
ERBB2-209ENST00000578709 YTHDC1Q96MU7 727 aaKnown RBP30.11■■■□□ 2.41
ERBB2-209ENST00000578709 SRCIN1Q9C0H9 1055 aa30.1■■■□□ 2.41
ERBB2-209ENST00000578709 UTRNP46939 3433 aa30.09■■■□□ 2.41
ERBB2-209ENST00000578709 RPGRQ92834 1020 aaKnown RBP30.09■■■□□ 2.41
ERBB2-209ENST00000578709 API5Q9BZZ5 524 aaKnown RBP30.09■■■□□ 2.41
ERBB2-209ENST00000578709 JARID2Q92833 1246 aaPredicted RBP30.08■■■□□ 2.41
ERBB2-209ENST00000578709 SLX4Q8IY92 1834 aa30.08■■■□□ 2.41
ERBB2-209ENST00000578709 CASP7P55210 303 aa30.07■■■□□ 2.4
ERBB2-209ENST00000578709 SF3B3Q15393 1217 aaKnown RBP30.07■■■□□ 2.4
ERBB2-209ENST00000578709 CRAMP1Q96RY5 1269 aa30.07■■■□□ 2.4
ERBB2-209ENST00000578709 IPO8O15397 1037 aaKnown RBP30.06■■■□□ 2.4
ERBB2-209ENST00000578709 ALDH1B1P30837 517 aa30.06■■■□□ 2.4
ERBB2-209ENST00000578709 PRPF40BQ6NWY9 871 aaKnown RBP30.06■■■□□ 2.4
ERBB2-209ENST00000578709 UBE3BQ7Z3V4 1068 aa30.06■■■□□ 2.4
ERBB2-209ENST00000578709 RBM17Q96I25 401 aaKnown RBP30.06■■■□□ 2.4
ERBB2-209ENST00000578709 PDE8AO60658 829 aa30.05■■■□□ 2.4
ERBB2-209ENST00000578709 CACNA1SQ13698 1873 aa30.05■■■□□ 2.4
ERBB2-209ENST00000578709 PLA2G12BQ9BX93 195 aa30.03■■■□□ 2.4
ERBB2-209ENST00000578709 GRM8O00222 908 aa30.02■■■□□ 2.4
ERBB2-209ENST00000578709 C7orf43Q8WVR3 580 aa30.02■■■□□ 2.4
ERBB2-209ENST00000578709 MYH3P11055 1940 aa30.02■■■□□ 2.4
ERBB2-209ENST00000578709 ATF7IPQ6VMQ6 1270 aa30.01■■■□□ 2.39
ERBB2-209ENST00000578709 FRAT1Q92837 279 aaPredicted RBP30.01■■■□□ 2.39
ERBB2-209ENST00000578709 ABCC4O15439 1325 aa30■■■□□ 2.39
ERBB2-209ENST00000578709 TRIM27P14373 513 aa30■■■□□ 2.39
ERBB2-209ENST00000578709 CCT4P50991 539 aaKnown RBP30■■■□□ 2.39
ERBB2-209ENST00000578709 DDX46Q7L014 1031 aaKnown RBP30■■■□□ 2.39
ERBB2-209ENST00000578709 C9orf78Q9NZ63 289 aaPredicted RBP30■■■□□ 2.39
ERBB2-209ENST00000578709 UTYO14607 1347 aa29.99■■■□□ 2.39
ERBB2-209ENST00000578709 C21orf2O43822 256 aa29.99■■■□□ 2.39
ERBB2-209ENST00000578709 CTSWP56202 376 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms