RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
SLC6A4-204ENST00000578609 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
SLC6A4-204ENST00000578609 FKBP5Q13451 457 aaPredicted RBP19.52■□□□□ 0.72
SLC6A4-204ENST00000578609 ERFEQ4G0M1 354 aa19.52■□□□□ 0.72
SLC6A4-204ENST00000578609 H0YIN7 160 aa19.51■□□□□ 0.71
SLC6A4-204ENST00000578609 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
SLC6A4-204ENST00000578609 GPR162Q16538 588 aa19.51■□□□□ 0.71
SLC6A4-204ENST00000578609 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
SLC6A4-204ENST00000578609 MYD88Q99836 296 aa19.51■□□□□ 0.71
SLC6A4-204ENST00000578609 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
SLC6A4-204ENST00000578609 SRGNP10124 158 aa19.5■□□□□ 0.71
SLC6A4-204ENST00000578609 CRY2Q49AN0 593 aa19.5■□□□□ 0.71
SLC6A4-204ENST00000578609 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
SLC6A4-204ENST00000578609 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
SLC6A4-204ENST00000578609 SH3TC1Q8TE82 1336 aa19.5■□□□□ 0.71
SLC6A4-204ENST00000578609 LAMB2P55268 1798 aa19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 ARFGEF1Q9Y6D6 1849 aa19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 SLC10A5Q5PT55 438 aa19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 PELP1Q8IZL8 1130 aaKnown RBP19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 CCDC191Q8NCU4 936 aa19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 DNAAF4Q8WXU2 420 aa19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 TRMT112Q9UI30 125 aaKnown RBP19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 WWC3Q9ULE0 1092 aa19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 GOLGB1Q14789 3259 aaKnown RBP19.49■□□□□ 0.71
SLC6A4-204ENST00000578609 IGKV5-2P06315 115 aa19.48■□□□□ 0.71
SLC6A4-204ENST00000578609 DALRD3Q5D0E6 543 aaKnown RBP19.48■□□□□ 0.71
SLC6A4-204ENST00000578609 STYK1Q6J9G0 422 aa19.48■□□□□ 0.71
SLC6A4-204ENST00000578609 DDX60Q8IY21 1712 aaKnown RBP19.48■□□□□ 0.71
SLC6A4-204ENST00000578609 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
SLC6A4-204ENST00000578609 NEXNQ0ZGT2 675 aa19.47■□□□□ 0.71
SLC6A4-204ENST00000578609 CWC25Q9NXE8 425 aaPredicted RBP19.47■□□□□ 0.71
SLC6A4-204ENST00000578609 BCS1LQ9Y276 419 aa19.47■□□□□ 0.71
SLC6A4-204ENST00000578609 PTPRCP08575 1304 aa19.47■□□□□ 0.71
SLC6A4-204ENST00000578609 NPR1P16066 1061 aa19.46■□□□□ 0.71
SLC6A4-204ENST00000578609 BRPF1P55201 1214 aaPredicted RBP19.46■□□□□ 0.71
SLC6A4-204ENST00000578609 TTLL6Q8N841 843 aa19.46■□□□□ 0.71
SLC6A4-204ENST00000578609 MASTLQ96GX5 879 aa19.46■□□□□ 0.71
SLC6A4-204ENST00000578609 BCL2L13Q9BXK5 485 aa19.46■□□□□ 0.71
SLC6A4-204ENST00000578609 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
SLC6A4-204ENST00000578609 NEURL1BA8MQ27 555 aa19.45■□□□□ 0.7
SLC6A4-204ENST00000578609 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
SLC6A4-204ENST00000578609 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
SLC6A4-204ENST00000578609 SYNE4Q8N205 404 aa19.45■□□□□ 0.7
SLC6A4-204ENST00000578609 ZBTB38Q8NAP3 1195 aaPredicted RBP19.45■□□□□ 0.7
SLC6A4-204ENST00000578609 LINS1Q8NG48 757 aa19.45■□□□□ 0.7
SLC6A4-204ENST00000578609 F6X3S4 739 aa19.44■□□□□ 0.7
SLC6A4-204ENST00000578609 PCCAP05165 728 aaPredicted RBP19.44■□□□□ 0.7
SLC6A4-204ENST00000578609 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
SLC6A4-204ENST00000578609 CNKSR1Q969H4 720 aa19.44■□□□□ 0.7
SLC6A4-204ENST00000578609 ZNF622Q969S3 477 aaKnown RBP eCLIP19.44■□□□□ 0.7
SLC6A4-204ENST00000578609 FAM89AQ96GI7 184 aa19.44■□□□□ 0.7
SLC6A4-204ENST00000578609 HCLS1P14317 486 aaPredicted RBP19.43■□□□□ 0.7
SLC6A4-204ENST00000578609 HOXA10P31260 410 aaPredicted RBP19.43■□□□□ 0.7
SLC6A4-204ENST00000578609 NLRP3Q96P20 1036 aa19.43■□□□□ 0.7
SLC6A4-204ENST00000578609 UTRNP46939 3433 aa19.42■□□□□ 0.7
SLC6A4-204ENST00000578609 BEND3Q5T5X7 828 aa19.42■□□□□ 0.7
SLC6A4-204ENST00000578609 PRPF40BQ6NWY9 871 aaKnown RBP19.42■□□□□ 0.7
SLC6A4-204ENST00000578609 CDHR2Q9BYE9 1310 aa19.42■□□□□ 0.7
SLC6A4-204ENST00000578609 IRS4O14654 1257 aaPredicted RBP19.41■□□□□ 0.7
SLC6A4-204ENST00000578609 GCKRQ14397 625 aa19.41■□□□□ 0.7
SLC6A4-204ENST00000578609 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
SLC6A4-204ENST00000578609 KIF16BQ96L93 1317 aa19.41■□□□□ 0.7
SLC6A4-204ENST00000578609 SLX4Q8IY92 1834 aa19.4■□□□□ 0.7
SLC6A4-204ENST00000578609 CACNA1SQ13698 1873 aa19.39■□□□□ 0.7
SLC6A4-204ENST00000578609 HSP90B1P14625 803 aaKnown RBP19.39■□□□□ 0.69
SLC6A4-204ENST00000578609 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.69
SLC6A4-204ENST00000578609 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.69
SLC6A4-204ENST00000578609 CRAMP1Q96RY5 1269 aa19.39■□□□□ 0.69
SLC6A4-204ENST00000578609 H7C1W4 665 aa19.38■□□□□ 0.69
SLC6A4-204ENST00000578609 ALDH1L1O75891 902 aa19.38■□□□□ 0.69
SLC6A4-204ENST00000578609 ALDH1B1P30837 517 aa19.38■□□□□ 0.69
SLC6A4-204ENST00000578609 C7orf43Q8WVR3 580 aa19.38■□□□□ 0.69
SLC6A4-204ENST00000578609 RBM17Q96I25 401 aaKnown RBP19.38■□□□□ 0.69
SLC6A4-204ENST00000578609 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
SLC6A4-204ENST00000578609 CASP7P55210 303 aa19.37■□□□□ 0.69
SLC6A4-204ENST00000578609 SLC4A10Q6U841 1118 aa19.37■□□□□ 0.69
SLC6A4-204ENST00000578609 NOB1Q9ULX3 412 aaKnown RBP19.37■□□□□ 0.69
SLC6A4-204ENST00000578609 ABCC4O15439 1325 aa19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 CHD4Q14839 1912 aa19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 PDE8AO60658 829 aa19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 SOGA3Q5TF21 947 aa19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 UBE3BQ7Z3V4 1068 aa19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 SRCIN1Q9C0H9 1055 aa19.36■□□□□ 0.69
SLC6A4-204ENST00000578609 C21orf2O43822 256 aa19.35■□□□□ 0.69
SLC6A4-204ENST00000578609 ARHGAP27Q6ZUM4 889 aa19.35■□□□□ 0.69
SLC6A4-204ENST00000578609 ARHGAP45Q92619 1136 aa19.35■□□□□ 0.69
SLC6A4-204ENST00000578609 PLA2G12BQ9BX93 195 aa19.35■□□□□ 0.69
SLC6A4-204ENST00000578609 API5Q9BZZ5 524 aaKnown RBP19.35■□□□□ 0.69
SLC6A4-204ENST00000578609 FER1L6Q2WGJ9 1857 aa19.35■□□□□ 0.69
SLC6A4-204ENST00000578609 NFKBIEO00221 500 aa19.34■□□□□ 0.69
SLC6A4-204ENST00000578609 BCAR3O75815 825 aa19.34■□□□□ 0.69
SLC6A4-204ENST00000578609 CTSWP56202 376 aa19.34■□□□□ 0.69
SLC6A4-204ENST00000578609 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
SLC6A4-204ENST00000578609 COL4A1P02462 1669 aa19.33■□□□□ 0.69
SLC6A4-204ENST00000578609 RTL9Q8NET4 1388 aa19.33■□□□□ 0.69
SLC6A4-204ENST00000578609 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
SLC6A4-204ENST00000578609 GRM8O00222 908 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms