RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 C3orf67Q6ZVT6 689 aa18.42■□□□□ 0.54
HS3ST3A1-202ENST00000578576 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
HS3ST3A1-202ENST00000578576 TAOK3Q9H2K8 898 aa18.42■□□□□ 0.54
HS3ST3A1-202ENST00000578576 DICER1Q9UPY3 1922 aaKnown RBP18.42■□□□□ 0.54
HS3ST3A1-202ENST00000578576 TIAM2Q8IVF5 1701 aa18.42■□□□□ 0.54
HS3ST3A1-202ENST00000578576 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
HS3ST3A1-202ENST00000578576 SLC51AQ86UW1 340 aa18.41■□□□□ 0.54
HS3ST3A1-202ENST00000578576 GLTPD2A6NH11 291 aa18.4■□□□□ 0.54
HS3ST3A1-202ENST00000578576 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
HS3ST3A1-202ENST00000578576 ANP32CO43423 234 aa18.4■□□□□ 0.54
HS3ST3A1-202ENST00000578576 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
HS3ST3A1-202ENST00000578576 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
HS3ST3A1-202ENST00000578576 ALDH1B1P30837 517 aa18.39■□□□□ 0.53
HS3ST3A1-202ENST00000578576 GNAI1P63096 354 aa18.39■□□□□ 0.53
HS3ST3A1-202ENST00000578576 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
HS3ST3A1-202ENST00000578576 UTP14AQ9BVJ6 771 aaKnown RBP18.39■□□□□ 0.53
HS3ST3A1-202ENST00000578576 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
HS3ST3A1-202ENST00000578576 ANKRD36CQ5JPF3 1778 aa18.39■□□□□ 0.53
HS3ST3A1-202ENST00000578576 TCIRG1Q13488 830 aa18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 CRY2Q49AN0 593 aa18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 CCDC93Q567U6 631 aa18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
HS3ST3A1-202ENST00000578576 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
HS3ST3A1-202ENST00000578576 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
HS3ST3A1-202ENST00000578576 NLRP10Q86W26 655 aa18.37■□□□□ 0.53
HS3ST3A1-202ENST00000578576 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
HS3ST3A1-202ENST00000578576 LTBP3Q9NS15 1303 aa18.37■□□□□ 0.53
HS3ST3A1-202ENST00000578576 POTECB2RU33 542 aa18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 ATP5J2-PTCD1G3V325 749 aa18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HOXB7P09629 217 aa18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 TSPYL6Q8N831 410 aa18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 TSR2Q969E8 191 aaKnown RBP18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 IBTKQ9P2D0 1353 aaPredicted RBP18.36■□□□□ 0.53
HS3ST3A1-202ENST00000578576 ZC3H4Q9UPT8 1303 aaKnown RBP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 DDNO94850 711 aaPredicted RBP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HOXA10P31260 410 aaPredicted RBP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 SLC10A5Q5PT55 438 aa18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 PLBD2Q8NHP8 589 aa18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 NLRP3Q96P20 1036 aa18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 TRMT112Q9UI30 125 aaKnown RBP18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 TAF1P21675 1872 aa18.35■□□□□ 0.53
HS3ST3A1-202ENST00000578576 VEGFAP15692 232 aaPredicted RBP18.34■□□□□ 0.53
HS3ST3A1-202ENST00000578576 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
HS3ST3A1-202ENST00000578576 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
HS3ST3A1-202ENST00000578576 LAMB2P55268 1798 aa18.34■□□□□ 0.53
HS3ST3A1-202ENST00000578576 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
HS3ST3A1-202ENST00000578576 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
HS3ST3A1-202ENST00000578576 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
HS3ST3A1-202ENST00000578576 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
HS3ST3A1-202ENST00000578576 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
HS3ST3A1-202ENST00000578576 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
HS3ST3A1-202ENST00000578576 RIC1Q4ADV7 1423 aa18.31■□□□□ 0.52
HS3ST3A1-202ENST00000578576 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
HS3ST3A1-202ENST00000578576 RIC3Q7Z5B4 369 aa18.3■□□□□ 0.52
HS3ST3A1-202ENST00000578576 ABCC4O15439 1325 aa18.29■□□□□ 0.52
HS3ST3A1-202ENST00000578576 SH3TC1Q8TE82 1336 aa18.29■□□□□ 0.52
HS3ST3A1-202ENST00000578576 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
HS3ST3A1-202ENST00000578576 SLC34A2O95436 690 aa18.29■□□□□ 0.52
HS3ST3A1-202ENST00000578576 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
HS3ST3A1-202ENST00000578576 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
HS3ST3A1-202ENST00000578576 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
HS3ST3A1-202ENST00000578576 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
HS3ST3A1-202ENST00000578576 DDX60Q8IY21 1712 aaKnown RBP18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 POTEIP0CG38 1075 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 POTEJP0CG39 1038 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 CCDC30Q5VVM6 783 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 PSMD1Q99460 953 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 MYD88Q99836 296 aa18.27■□□□□ 0.52
HS3ST3A1-202ENST00000578576 COL4A5P29400 1685 aa18.26■□□□□ 0.51
HS3ST3A1-202ENST00000578576 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
HS3ST3A1-202ENST00000578576 ATP6V0A2Q9Y487 856 aa18.26■□□□□ 0.51
HS3ST3A1-202ENST00000578576 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
HS3ST3A1-202ENST00000578576 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
HS3ST3A1-202ENST00000578576 G2E3Q7L622 706 aa18.25■□□□□ 0.51
HS3ST3A1-202ENST00000578576 FZD9O00144 591 aa18.24■□□□□ 0.51
HS3ST3A1-202ENST00000578576 BBOX1O75936 387 aa18.24■□□□□ 0.51
HS3ST3A1-202ENST00000578576 LARGE2Q8N3Y3 721 aa18.24■□□□□ 0.51
HS3ST3A1-202ENST00000578576 JDP2Q8WYK2 163 aa18.24■□□□□ 0.51
HS3ST3A1-202ENST00000578576 IRS4O14654 1257 aaPredicted RBP18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 GRAPQ13588 217 aa18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 SP8Q8IXZ3 490 aa18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 GRAPLQ8TC17 118 aaPredicted RBP18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
HS3ST3A1-202ENST00000578576 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms