RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.16
ERBB2-206ENST00000578373 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.16
ERBB2-206ENST00000578373 SOS1Q07889 1333 aaPredicted RBP14.02□□□□□ -0.17
ERBB2-206ENST00000578373 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 TOP1P11387 765 aaKnown RBP14.02□□□□□ -0.17
ERBB2-206ENST00000578373 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 FAM200AQ8TCP9 573 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 LGR6Q9HBX8 967 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 MAGEC2Q9UBF1 373 aaPredicted RBP14.02□□□□□ -0.17
ERBB2-206ENST00000578373 KLF18A0A0U1RQI7 1052 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 SMTNL1A8MU46 457 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.17
ERBB2-206ENST00000578373 CREB3L3Q68CJ9 461 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 CNNM3Q8NE01 707 aa14.02□□□□□ -0.17
ERBB2-206ENST00000578373 CHL1O00533 1208 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 EPS15P42566 896 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 TYRO3Q06418 890 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 FAM227BQ96M60 508 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 NPATQ14207 1427 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 SKILP12757 684 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 RXRAP19793 462 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 MCM5P33992 734 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 ZSCAN25Q6NSZ9 544 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 KRT28Q7Z3Y7 464 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 APOBRQ0VD83 1088 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
ERBB2-206ENST00000578373 EDC3Q96F86 508 aaKnown RBP14.01□□□□□ -0.17
ERBB2-206ENST00000578373 ADGRL2O95490 1459 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 DYNC1I1O14576 645 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 LMOD1P29536 600 aaPredicted RBP14□□□□□ -0.17
ERBB2-206ENST00000578373 CDK5RAP3Q96JB5 506 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 TANGO6Q9C0B7 1094 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 CBFA2T2O43439 604 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 DNA2P51530 1060 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 CCDC102AQ96A19 550 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 CCP110O43303 1012 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 CGNQ9P2M7 1197 aaKnown RBP14□□□□□ -0.17
ERBB2-206ENST00000578373 GOLGA8AA7E2F4 631 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 TIMM10P62072 90 aa14□□□□□ -0.17
ERBB2-206ENST00000578373 SHANK2Q9UPX8 1470 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 EPB41L2O43491 1005 aaKnown RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 TMCO3Q6UWJ1 677 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 STX1AQ16623 288 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 UVSSAQ2YD98 709 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 ACBD3Q9H3P7 528 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 DEF6Q9H4E7 631 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 GNL3LQ9NVN8 582 aaKnown RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 SLC12A7Q9Y666 1083 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 BICC1Q9H694 974 aaKnown RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
ERBB2-206ENST00000578373 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
ERBB2-206ENST00000578373 ENOX2Q16206 610 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 CENPHQ9H3R5 247 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 USP19O94966 1318 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 KIF4BQ2VIQ3 1234 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 CEP135Q66GS9 1140 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 SLC26A6Q9BXS9 759 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 ZNHIT6Q9NWK9 470 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 AKAP2Q9Y2D5 859 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 STARD3NLO95772 234 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 NOM1Q5C9Z4 860 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 HELBQ8NG08 1087 aaPredicted RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 SNX14Q9Y5W7 946 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
ERBB2-206ENST00000578373 OTUD7BQ6GQQ9 843 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 LINS1Q8NG48 757 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 AK7Q96M32 723 aa13.98□□□□□ -0.17
ERBB2-206ENST00000578373 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 TFCP2Q12800 502 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 NCOA5Q9HCD5 579 aaKnown RBP13.97□□□□□ -0.17
ERBB2-206ENST00000578373 SNW1Q13573 536 aaKnown RBP13.97□□□□□ -0.17
ERBB2-206ENST00000578373 TMEM67Q5HYA8 995 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
ERBB2-206ENST00000578373 DACH1Q9UI36 760 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 RIMS2Q9UQ26 1411 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
ERBB2-206ENST00000578373 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
ERBB2-206ENST00000578373 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
ERBB2-206ENST00000578373 NOL7Q9UMY1 257 aaKnown RBP13.97□□□□□ -0.17
ERBB2-206ENST00000578373 H0YHG0 523 aa13.96□□□□□ -0.17
ERBB2-206ENST00000578373 USP5P45974 858 aa13.96□□□□□ -0.17
ERBB2-206ENST00000578373 INTS4Q96HW7 963 aaKnown RBP13.96□□□□□ -0.17
ERBB2-206ENST00000578373 CTAGE5O15320 804 aa13.96□□□□□ -0.17
ERBB2-206ENST00000578373 KCNQ3O43525 872 aa13.96□□□□□ -0.17
ERBB2-206ENST00000578373 KCNA6P17658 529 aa13.96□□□□□ -0.17
ERBB2-206ENST00000578373 IGHMBP2P38935 993 aaKnown RBP13.96□□□□□ -0.17
ERBB2-206ENST00000578373 MCMDC2Q4G0Z9 681 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms