RNA–Protein interactions for RNA: ENST00000578340.4

AC116003.1-201, humanhuman

TSL 3 BASIC

Gene AC116003.1, Length 536 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.1-201ENST00000578340 HYPKQ9NX55 129 aa20.83■□□□□ 0.93
AC116003.1-201ENST00000578340 RIC1Q4ADV7 1423 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 HSP90AB3PQ58FF7 597 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 ANKRD13DQ6ZTN6 518 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 PLBD2Q8NHP8 589 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 C7orf43Q8WVR3 580 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 UTP14AQ9BVJ6 771 aaKnown RBP20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 LAMB2P55268 1798 aa20.82■□□□□ 0.92
AC116003.1-201ENST00000578340 KIF3CO14782 793 aa20.81■□□□□ 0.92
AC116003.1-201ENST00000578340 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
AC116003.1-201ENST00000578340 PHAXQ9H814 394 aaKnown RBP20.81■□□□□ 0.92
AC116003.1-201ENST00000578340 NMRK2Q9NPI5 230 aa20.81■□□□□ 0.92
AC116003.1-201ENST00000578340 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
AC116003.1-201ENST00000578340 ALDH1B1P30837 517 aa20.79■□□□□ 0.92
AC116003.1-201ENST00000578340 RPGRQ92834 1020 aaKnown RBP20.79■□□□□ 0.92
AC116003.1-201ENST00000578340 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
AC116003.1-201ENST00000578340 IL16Q14005 1332 aa20.78■□□□□ 0.92
AC116003.1-201ENST00000578340 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
AC116003.1-201ENST00000578340 SOGA3Q5TF21 947 aa20.78■□□□□ 0.92
AC116003.1-201ENST00000578340 TRMT112Q9UI30 125 aaKnown RBP20.78■□□□□ 0.92
AC116003.1-201ENST00000578340 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
AC116003.1-201ENST00000578340 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.92
AC116003.1-201ENST00000578340 HOXA10P31260 410 aaPredicted RBP20.77■□□□□ 0.92
AC116003.1-201ENST00000578340 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
AC116003.1-201ENST00000578340 SLC10A5Q5PT55 438 aa20.77■□□□□ 0.92
AC116003.1-201ENST00000578340 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
AC116003.1-201ENST00000578340 ISCA1Q9BUE6 129 aa20.77■□□□□ 0.92
AC116003.1-201ENST00000578340 TCERG1O14776 1098 aaKnown RBP20.76■□□□□ 0.91
AC116003.1-201ENST00000578340 SLC51AQ86UW1 340 aa20.76■□□□□ 0.91
AC116003.1-201ENST00000578340 NLRP3Q96P20 1036 aa20.76■□□□□ 0.91
AC116003.1-201ENST00000578340 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
AC116003.1-201ENST00000578340 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
AC116003.1-201ENST00000578340 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
AC116003.1-201ENST00000578340 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 TAF1P21675 1872 aa20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 TWISTNBQ3B726 338 aaPredicted RBP20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 RIC3Q7Z5B4 369 aa20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 WDR63Q8IWG1 891 aa20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 KDM2BQ8NHM5 1336 aa20.75■□□□□ 0.91
AC116003.1-201ENST00000578340 RBM17Q96I25 401 aaKnown RBP20.74■□□□□ 0.91
AC116003.1-201ENST00000578340 CRAMP1Q96RY5 1269 aa20.74■□□□□ 0.91
AC116003.1-201ENST00000578340 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
AC116003.1-201ENST00000578340 SH3TC1Q8TE82 1336 aa20.74■□□□□ 0.91
AC116003.1-201ENST00000578340 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
AC116003.1-201ENST00000578340 SNED1Q8TER0 1413 aa20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 RTL5Q5HYW3 569 aaPredicted RBP20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 RTKN2Q8IZC4 609 aa20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 FAM89AQ96GI7 184 aa20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 MYD88Q99836 296 aa20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 ZNF277Q9NRM2 450 aaPredicted RBP20.72■□□□□ 0.91
AC116003.1-201ENST00000578340 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
AC116003.1-201ENST00000578340 CHMP4AQ9BY43 222 aa20.71■□□□□ 0.91
AC116003.1-201ENST00000578340 ABCC4O15439 1325 aa20.71■□□□□ 0.91
AC116003.1-201ENST00000578340 TRIM28Q13263 835 aaKnown RBP20.7■□□□□ 0.9
AC116003.1-201ENST00000578340 STK31Q9BXU1 1019 aa20.7■□□□□ 0.9
AC116003.1-201ENST00000578340 CACNA1FO60840 1977 aa20.7■□□□□ 0.9
AC116003.1-201ENST00000578340 TOMM70O94826 608 aa20.69■□□□□ 0.9
AC116003.1-201ENST00000578340 EXOSC9Q06265 439 aaKnown RBP20.69■□□□□ 0.9
AC116003.1-201ENST00000578340 G2E3Q7L622 706 aa20.69■□□□□ 0.9
AC116003.1-201ENST00000578340 DDX58O95786 925 aaKnown RBP20.68■□□□□ 0.9
AC116003.1-201ENST00000578340 METTL22Q9BUU2 404 aaPredicted RBP20.68■□□□□ 0.9
AC116003.1-201ENST00000578340 MAP3K2Q9Y2U5 619 aa20.68■□□□□ 0.9
AC116003.1-201ENST00000578340 WDR90Q96KV7 1748 aa20.67■□□□□ 0.9
AC116003.1-201ENST00000578340 VAMP4O75379 141 aa20.67■□□□□ 0.9
AC116003.1-201ENST00000578340 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
AC116003.1-201ENST00000578340 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
AC116003.1-201ENST00000578340 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
AC116003.1-201ENST00000578340 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 DDX46Q7L014 1031 aaKnown RBP20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 PSMD1Q99460 953 aa20.66■□□□□ 0.9
AC116003.1-201ENST00000578340 COL4A1P02462 1669 aa20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 ZNF521Q96K83 1311 aa20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 POTECB2RU33 542 aa20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 IRS4O14654 1257 aaPredicted RBP20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 DDNO94850 711 aaPredicted RBP20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 ZBTB38Q8NAP3 1195 aaPredicted RBP20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 ATP6V0A2Q9Y487 856 aa20.65■□□□□ 0.9
AC116003.1-201ENST00000578340 COL4A5P29400 1685 aa20.64■□□□□ 0.9
AC116003.1-201ENST00000578340 CEP350Q5VT06 3117 aa20.64■□□□□ 0.89
AC116003.1-201ENST00000578340 MYH16Q9H6N6 1097 aa20.64■□□□□ 0.89
AC116003.1-201ENST00000578340 CWC25Q9NXE8 425 aaPredicted RBP20.64■□□□□ 0.89
AC116003.1-201ENST00000578340 ZNF541Q9H0D2 1346 aa20.63■□□□□ 0.89
AC116003.1-201ENST00000578340 BBOX1O75936 387 aa20.63■□□□□ 0.89
AC116003.1-201ENST00000578340 IGKV5-2P06315 115 aa20.63■□□□□ 0.89
AC116003.1-201ENST00000578340 VEGFAP15692 232 aaPredicted RBP20.63■□□□□ 0.89
AC116003.1-201ENST00000578340 GRAPQ13588 217 aa20.63■□□□□ 0.89
AC116003.1-201ENST00000578340 SF3B3Q15393 1217 aaKnown RBP20.63■□□□□ 0.89
AC116003.1-201ENST00000578340 RBM46Q8TBY0 533 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms