RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FAM182BQ5T319 152 aa10.27□□□□□ -0.77
COPS3-215ENST00000578317 CCDC30Q5VVM6 783 aa10.27□□□□□ -0.77
COPS3-215ENST00000578317 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
COPS3-215ENST00000578317 ZNF454Q8N9F8 522 aa10.27□□□□□ -0.77
COPS3-215ENST00000578317 SCN11AQ9UI33 1791 aa10.26□□□□□ -0.77
COPS3-215ENST00000578317 SSH1Q8WYL5 1049 aa10.26□□□□□ -0.77
COPS3-215ENST00000578317 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
COPS3-215ENST00000578317 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
COPS3-215ENST00000578317 NPDC1Q9NQX5 325 aaPredicted RBP10.25□□□□□ -0.77
COPS3-215ENST00000578317 HMGB2P26583 209 aaKnown RBP10.25□□□□□ -0.77
COPS3-215ENST00000578317 PTF1AQ7RTS3 328 aa10.25□□□□□ -0.77
COPS3-215ENST00000578317 FBXW7Q969H0 707 aa10.25□□□□□ -0.77
COPS3-215ENST00000578317 SLC4A9Q96Q91 983 aa10.25□□□□□ -0.77
COPS3-215ENST00000578317 LOC102724428A0A0B4J2F2 783 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 PLSCR1O15162 318 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 MAP3K7O43318 606 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 BCAR3O75815 825 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 STARD3NLO95772 234 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 SIK1P57059 783 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
COPS3-215ENST00000578317 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 ADAM33Q9BZ11 813 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 DBF4Q9UBU7 674 aaPredicted RBP10.24□□□□□ -0.77
COPS3-215ENST00000578317 SUPT16HQ9Y5B9 1047 aaKnown RBP10.24□□□□□ -0.77
COPS3-215ENST00000578317 USP16Q9Y5T5 823 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 ERBB4Q15303 1308 aa10.24□□□□□ -0.77
COPS3-215ENST00000578317 PRAMEF22A3QJZ6 481 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 TRIM37O94972 964 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.23□□□□□ -0.77
COPS3-215ENST00000578317 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 STK31Q9BXU1 1019 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 DDX21Q9NR30 783 aaKnown RBP eCLIP10.23□□□□□ -0.77
COPS3-215ENST00000578317 SMC4Q9NTJ3 1288 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 PALLDQ8WX93 1383 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 SIPA1L3O60292 1781 aaPredicted RBP10.23□□□□□ -0.77
COPS3-215ENST00000578317 KCPQ6ZWJ8 1503 aa10.23□□□□□ -0.77
COPS3-215ENST00000578317 IPO8O15397 1037 aaKnown RBP10.22□□□□□ -0.77
COPS3-215ENST00000578317 ST18O60284 1047 aa10.22□□□□□ -0.77
COPS3-215ENST00000578317 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
COPS3-215ENST00000578317 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
COPS3-215ENST00000578317 TOGARAM1Q9Y4F4 1720 aa10.22□□□□□ -0.77
COPS3-215ENST00000578317 CYP19A1P11511 503 aaPredicted RBP10.22□□□□□ -0.77
COPS3-215ENST00000578317 FLIIQ13045 1269 aa10.22□□□□□ -0.77
COPS3-215ENST00000578317 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
COPS3-215ENST00000578317 KIF16BQ96L93 1317 aa10.22□□□□□ -0.77
COPS3-215ENST00000578317 ATP6V1AP38606 617 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 RRP1P56182 461 aaKnown RBP10.21□□□□□ -0.78
COPS3-215ENST00000578317 PDE3AQ14432 1141 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 SLC27A3Q5K4L6 730 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 LRP10Q7Z4F1 713 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 CCDC125Q86Z20 511 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 DNAJC10Q8IXB1 793 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 NOB1Q9ULX3 412 aaKnown RBP10.21□□□□□ -0.78
COPS3-215ENST00000578317 PTPRCP08575 1304 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 KDM3BQ7LBC6 1761 aa10.21□□□□□ -0.78
COPS3-215ENST00000578317 MS4A1P11836 297 aa10.2□□□□□ -0.78
COPS3-215ENST00000578317 C6orf132Q5T0Z8 1188 aa10.2□□□□□ -0.78
COPS3-215ENST00000578317 RC3H1Q5TC82 1133 aaKnown RBP10.2□□□□□ -0.78
COPS3-215ENST00000578317 BCL2L13Q9BXK5 485 aa10.2□□□□□ -0.78
COPS3-215ENST00000578317 CHPF2Q9P2E5 772 aa10.2□□□□□ -0.78
COPS3-215ENST00000578317 ITPK1Q13572 414 aa10.19□□□□□ -0.78
COPS3-215ENST00000578317 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
COPS3-215ENST00000578317 ATF7IPQ6VMQ6 1270 aa10.19□□□□□ -0.78
COPS3-215ENST00000578317 SBF2Q86WG5 1849 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 TCERG1O14776 1098 aaKnown RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 APBA3O96018 575 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 A1BGP04217 495 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 NBPF10Q6P3W6 841 aaKnown RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 INTS5Q6P9B9 1019 aaKnown RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 NBPF15Q8N660 670 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 NECTIN2Q92692 538 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 API5Q9BZZ5 524 aaKnown RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 CCNL1Q9UK58 526 aaPredicted RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 PAPPAQ13219 1627 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 NHSQ6T4R5 1651 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 IL6STP40189 918 aaPredicted RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 PROSER3Q2NL68 480 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 G2E3Q7L622 706 aa10.18□□□□□ -0.78
COPS3-215ENST00000578317 FRAT1Q92837 279 aaPredicted RBP10.18□□□□□ -0.78
COPS3-215ENST00000578317 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 PLIN1O60240 522 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 TRIM27P14373 513 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 CLCN1P35523 988 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 CRKLP46109 303 aaKnown RBP10.17□□□□□ -0.78
COPS3-215ENST00000578317 EIF5P55010 431 aaKnown RBP10.17□□□□□ -0.78
COPS3-215ENST00000578317 TXNRD1Q16881 649 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 DZIP1LQ8IYY4 767 aaKnown RBP10.17□□□□□ -0.78
COPS3-215ENST00000578317 PCMTD1Q96MG8 357 aaPredicted RBP10.17□□□□□ -0.78
COPS3-215ENST00000578317 PHAXQ9H814 394 aaKnown RBP10.17□□□□□ -0.78
COPS3-215ENST00000578317 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 LRRC4BQ9NT99 713 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 CCDC87Q9NVE4 849 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 ITGB4P16144 1822 aa10.17□□□□□ -0.78
COPS3-215ENST00000578317 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms