RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 DGAT1O75907 488 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 IL2RBP14784 551 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 CD46P15529 392 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 YBX3P16989 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRM-206ENST00000578093 NUTM1Q86Y26 1132 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 NLRP2Q9NX02 1062 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 C4BP0C0L5 1744 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 PKD1L3Q7Z443 1732 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 MAP2P11137 1827 aaKnown RBP5.67□□□□□ -1.5
PTPRM-206ENST00000578093 ANKRD36BQ8N2N9 1353 aa5.67□□□□□ -1.5
PTPRM-206ENST00000578093 EDC4Q6P2E9 1401 aaKnown RBP5.66□□□□□ -1.5
PTPRM-206ENST00000578093 ATP10DQ9P241 1426 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 GPR162Q16538 588 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 KMT5BQ4FZB7 885 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 TRIM67Q6ZTA4 783 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 PRR14Q9BWN1 585 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 GOPCQ9HD26 462 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 CICQ96RK0 1608 aaPredicted RBP5.66□□□□□ -1.5
PTPRM-206ENST00000578093 ADCY9O60503 1353 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 PCNTO95613 3336 aa5.66□□□□□ -1.5
PTPRM-206ENST00000578093 SOWAHBA6NEL2 793 aa5.65□□□□□ -1.5
PTPRM-206ENST00000578093 FBLN1P23142 703 aa5.65□□□□□ -1.5
PTPRM-206ENST00000578093 PPP4CP60510 307 aa5.65□□□□□ -1.5
PTPRM-206ENST00000578093 MSL1Q68DK7 614 aa5.65□□□□□ -1.5
PTPRM-206ENST00000578093 KCTD17Q8N5Z5 321 aa5.65□□□□□ -1.5
PTPRM-206ENST00000578093 ANKRD26Q9UPS8 1709 aa5.65□□□□□ -1.51
PTPRM-206ENST00000578093 N4BP2Q86UW6 1770 aaPredicted RBP5.65□□□□□ -1.51
PTPRM-206ENST00000578093 KIF13BQ9NQT8 1826 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 BRCA1P38398 1863 aaKnown RBP5.64□□□□□ -1.51
PTPRM-206ENST00000578093 GCGRP47871 477 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 USP46P62068 366 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 GRIPAP1Q4V328 841 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 SLC27A3Q5K4L6 730 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 AMIGO3Q86WK7 504 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 DDX54Q8TDD1 881 aaKnown RBP5.64□□□□□ -1.51
PTPRM-206ENST00000578093 SYTL4Q96C24 671 aaPredicted RBP5.64□□□□□ -1.51
PTPRM-206ENST00000578093 LTV1Q96GA3 475 aaPredicted RBP5.64□□□□□ -1.51
PTPRM-206ENST00000578093 PCMTD1Q96MG8 357 aaPredicted RBP5.64□□□□□ -1.51
PTPRM-206ENST00000578093 TBC1D2Q9BYX2 928 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 TSR3Q9UJK0 312 aaKnown RBP5.64□□□□□ -1.51
PTPRM-206ENST00000578093 HPS5Q9UPZ3 1129 aa5.64□□□□□ -1.51
PTPRM-206ENST00000578093 C4AP0C0L4 1744 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 KDM4AO75164 1064 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 CFHP08603 1231 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 SLC10A3P09131 477 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 POLD1P28340 1107 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 SKIV2LQ15477 1246 aaKnown RBP5.63□□□□□ -1.51
PTPRM-206ENST00000578093 PKDCCQ504Y2 493 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 SH3D19Q5HYK7 790 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 NYAP1Q6ZVC0 841 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 SMIM5Q71RC9 77 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 COL23A1Q86Y22 540 aaPredicted RBP5.63□□□□□ -1.51
PTPRM-206ENST00000578093 USHBP1Q8N6Y0 703 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 SLC16A10Q8TF71 515 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 SLC12A5Q9H2X9 1139 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 TFCP2L1Q9NZI6 479 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 MAP3K19Q56UN5 1328 aa5.63□□□□□ -1.51
PTPRM-206ENST00000578093 COL5A3P25940 1745 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-206ENST00000578093 WDR90Q96KV7 1748 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 HOXC9P31274 260 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 BCAMP50895 628 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 TMC1Q8TDI8 760 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 SPIRE2Q8WWL2 714 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 IP6K1Q92551 441 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 CCNL1Q9UK58 526 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-206ENST00000578093 WWC3Q9ULE0 1092 aa5.62□□□□□ -1.51
PTPRM-206ENST00000578093 RTL1A6NKG5 1358 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 GSK3AP49840 483 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 NEUROD1Q13562 356 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 MYSM1Q5VVJ2 828 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 HDGFL2Q7Z4V5 671 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-206ENST00000578093 RIC3Q7Z5B4 369 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 ZNF526Q8TF50 670 aaPredicted RBP5.61□□□□□ -1.51
PTPRM-206ENST00000578093 PALLDQ8WX93 1383 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 USP47Q96K76 1375 aa5.61□□□□□ -1.51
PTPRM-206ENST00000578093 IGSF1Q8N6C5 1336 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 GJA5P36382 358 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 CLK2P49760 499 aaKnown RBP5.6□□□□□ -1.51
PTPRM-206ENST00000578093 RRS1Q15050 365 aaKnown RBP5.6□□□□□ -1.51
PTPRM-206ENST00000578093 NBPF6Q5VWK0 638 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 ZCRB1Q8TBF4 217 aaKnown RBP5.6□□□□□ -1.51
PTPRM-206ENST00000578093 NBPF4Q96M43 638 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 CARD11Q9BXL7 1154 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 POLR3EQ9NVU0 708 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 ARFGEF1Q9Y6D6 1849 aa5.6□□□□□ -1.51
PTPRM-206ENST00000578093 PXDNLA1KZ92 1463 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 NCAPD2Q15021 1401 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 MYH14Q7Z406 1995 aaKnown RBP5.59□□□□□ -1.51
PTPRM-206ENST00000578093 HOXA2O43364 376 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 ACTN4O43707 911 aaKnown RBP5.59□□□□□ -1.51
PTPRM-206ENST00000578093 GRIN3BO60391 1043 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 HSPA6P17066 643 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 ATP6V1AP38606 617 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 TESK2Q96S53 571 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 AAASQ9NRG9 546 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 GTF3C3Q9Y5Q9 886 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 TJP1Q07157 1748 aa5.59□□□□□ -1.51
PTPRM-206ENST00000578093 VIRMAQ69YN4 1812 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms