RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 ZNF592Q92610 1267 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 ZNF622Q969S3 477 aaKnown RBP eCLIP5.49□□□□□ -1.53
NF1-218ENST00000577967 SPATA32Q96LK8 384 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 ESYT1Q9BSJ8 1104 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 BCL11BQ9C0K0 894 aaPredicted RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 NAPBQ9H115 298 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 PHKG2P15735 406 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 PDCP20941 246 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 PDE4CQ08493 712 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 HELBQ8NG08 1087 aaPredicted RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 CDC5LQ99459 802 aaKnown RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 METTL22Q9BUU2 404 aaPredicted RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 GJB2P29033 226 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 CAMK4Q16566 473 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 TRIM22Q8IYM9 498 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 CCDC47Q96A33 483 aaKnown RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 SUCLG2Q96I99 432 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 ZNF594Q96JF6 807 aaPredicted RBP5.49□□□□□ -1.53
NF1-218ENST00000577967 PPLO60437 1756 aa5.49□□□□□ -1.53
NF1-218ENST00000577967 CDK12Q9NYV4 1490 aaPredicted RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 ME1P48163 572 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 PRIM1P49642 420 aaKnown RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 TTF1Q15361 905 aaPredicted RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 PLBD2Q8NHP8 589 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 SDF4Q9BRK5 362 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 ZNF335Q9H4Z2 1342 aaPredicted RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 FERMT3Q86UX7 667 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 ANKRD18AQ8IVF6 992 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 LINS1Q8NG48 757 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 SMARCC1Q92922 1105 aaPredicted RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 PNMA6EA0A0J9YXQ4 647 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 PRAMEF22A3QJZ6 481 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 C6orf229H3BNL8 230 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 RANBP6O60518 1105 aaKnown RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 MCM4P33991 863 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 TNPO1Q92973 898 aaKnown RBP5.48□□□□□ -1.53
NF1-218ENST00000577967 MYO3AQ8NEV4 1616 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 KIAA0232Q92628 1395 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 CDKL5O76039 1030 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 FAM89AQ96GI7 184 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 LRRC2Q9BYS8 371 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 TNMDQ9H2S6 317 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 DDX21Q9NR30 783 aaKnown RBP eCLIP5.48□□□□□ -1.53
NF1-218ENST00000577967 PAG1Q9NWQ8 432 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 KIAA1210Q9ULL0 1709 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 GNPATO15228 680 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 CCDC82Q8N4S0 544 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 BABAM1Q9NWV8 329 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 PTPRMP28827 1452 aa5.48□□□□□ -1.53
NF1-218ENST00000577967 DEPDC5O75140 1603 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 KINO60870 393 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 MRE11P49959 708 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 ATP2B3Q16720 1220 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 PDILTQ8N807 584 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 NECAB1Q8N987 351 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 NOC3LQ8WTT2 800 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 LIMCH1Q9UPQ0 1083 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 JAG2Q9Y219 1238 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 ITSN1Q15811 1721 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 SMC2O95347 1197 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 MBD3O95983 291 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 NBPF7P0C2Y1 421 aaPredicted RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 KRT85P78386 507 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 TSR1Q2NL82 804 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 TRMT2AQ8IZ69 625 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 SPC24Q8NBT2 197 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 NAT10Q9H0A0 1025 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 MKNK2Q9HBH9 465 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 USP21Q9UK80 565 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 FRMPD1Q5SYB0 1578 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 GOLGA8BA8MQT2 603 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 IL15P40933 162 aaPredicted RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 CDK5RAP3Q96JB5 506 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 NEK1Q96PY6 1258 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 RTCBQ9Y3I0 505 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 SLC12A7Q9Y666 1083 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 SOS1Q07889 1333 aaPredicted RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 RNF123Q5XPI4 1314 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 RTL1A6NKG5 1358 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 FER1L4A9Z1Z3 1794 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 SSRP1Q08945 709 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 CCDC24Q8N4L8 307 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 MPNDQ8N594 471 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 ZNF496Q96IT1 587 aaPredicted RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 BRPF3Q9ULD4 1205 aa5.47□□□□□ -1.53
NF1-218ENST00000577967 RBM8AQ9Y5S9 174 aaKnown RBP5.47□□□□□ -1.53
NF1-218ENST00000577967 GOLGA8AA7E2F4 631 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 F8W031 263 aaPredicted RBP5.46□□□□□ -1.53
NF1-218ENST00000577967 IFIT3O14879 490 aaKnown RBP5.46□□□□□ -1.53
NF1-218ENST00000577967 TPM1P09493 284 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 UQCRFS1P1P0C7P4 283 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 ITGA6P23229 1130 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 MCMDC2Q4G0Z9 681 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 SOGA3Q5TF21 947 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 CCDC129Q6ZRS4 1044 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 TCEANC2Q96MN5 208 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 CCDC43Q96MW1 224 aaKnown RBP5.46□□□□□ -1.53
NF1-218ENST00000577967 CIZ1Q9ULV3 898 aaPredicted RBP5.46□□□□□ -1.53
NF1-218ENST00000577967 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.53
NF1-218ENST00000577967 ABCC4O15439 1325 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms