RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 ANKRD1Q15327 319 aa3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 TMEM266Q2M3C6 531 aa3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 C2orf69Q8N8R5 385 aa3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 SDF4Q9BRK5 362 aa3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 PRKRIP1Q9H875 184 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 ADGRF5Q8IZF2 1346 aa3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 KDM2BQ8NHM5 1336 aa3.44□□□□□ -1.86
SMCHD1-203ENST00000577880 KDM5DQ9BY66 1539 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 BIVM-ERCC5R4GMW8 1640 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 M0QZ92 97 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 BIRC2Q13490 618 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 KRT32Q14532 448 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 SLC4A8Q2Y0W8 1093 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 UBE3BQ7Z3V4 1068 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 UNC5CLQ8IV45 518 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 KAT14Q9H8E8 782 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 U3KPZ7 1027 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 TMEM94Q12767 1356 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 NOS1P29475 1434 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 NAA16Q6N069 864 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 ZNF784Q8NCA9 323 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 ZNF396Q96N95 335 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 AS3MTQ9HBK9 375 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 LDHBP07195 334 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 HOXD10P28358 340 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 STK38Q15208 465 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 SUPT20HL1Q3ZLR7 823 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 FILIP1LQ4L180 1135 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 STXBP4Q6ZWJ1 553 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 CENPQQ7L2Z9 268 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 TRMT1LQ7Z2T5 733 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 CATIPQ7Z7H3 387 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 KIF1BPQ96EK5 621 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 TANGO6Q9C0B7 1094 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 LUC7LQ9NQ29 371 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 STX8Q9UNK0 236 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 TRPM2O94759 1503 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 TRAPPC8Q9Y2L5 1435 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 REREQ9P2R6 1566 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 IQCA1LA6NCM1 817 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 CDC45O75419 566 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 RGS20O76081 388 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 KIF20AO95235 890 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 SMC2O95347 1197 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 CETN2P41208 172 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 CCNA1P78396 465 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 SLC39A6Q13433 755 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 HSP90AA2PQ14568 343 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 FOXD4L6Q3SYB3 417 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 FOXD4L3Q6VB84 417 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 NFATC2IPQ8NCF5 419 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 ARHGEF10LQ9HCE6 1279 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 VAT1LQ9HCJ6 419 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 NSD3Q9BZ95 1437 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 SH3TC1Q8TE82 1336 aa3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 ZNF335Q9H4Z2 1342 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-203ENST00000577880 CCDC194A0A1B0GVG4 234 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 PSDA5PKW4 1024 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 PABPN1LA6NDY0 278 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 IRS4O14654 1257 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 TSPY3P0CV98 308 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 TSPY8P0CW00 308 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 MLLT1Q03111 559 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 SKIV2LQ15477 1246 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 CC2D2BQ6DHV5 1058 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ELMSAN1Q6PJG2 1045 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 WDR63Q8IWG1 891 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 FAM13BQ9NYF5 915 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 PIM2Q9P1W9 311 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ADAMTS8Q9UP79 889 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 CYP46A1Q9Y6A2 500 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 CYP7A1P22680 504 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 NLRP5P59047 1200 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ATP2B3Q16720 1220 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 FAM47CQ5HY64 1035 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 CCDC181Q5TID7 509 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 COPS6Q7L5N1 327 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ZBTB33Q86T24 672 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 RPAP2Q8IXW5 612 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 SMARCC2Q8TAQ2 1214 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 IP6K1Q92551 441 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 TCHPQ9BT92 498 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 MYO6Q9UM54 1294 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ABCC3O15438 1527 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ZNF213O14771 459 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 RAB11FIP3O75154 756 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 MNX1P50219 401 aaPredicted RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 CETN1Q12798 172 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 BLOC1S2Q6QNY1 142 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 SASS6Q6UVJ0 657 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 FAM200AQ8TCP9 573 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 XAGE3Q8WTP9 111 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 TSR2Q969E8 191 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ZMYND15Q9H091 742 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 MAP3K2Q9Y2U5 619 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 BCL9LQ86UU0 1499 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 PPIP5K1Q6PFW1 1433 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ZBED4O75132 1171 aa3.42□□□□□ -1.86
SMCHD1-203ENST00000577880 ZBTB7AO95365 584 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms