RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MCOLN1Q9GZU1 580 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 SMC4Q9NTJ3 1288 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 KIF16BQ96L93 1317 aa14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 LDHDQ86WU2 507 aa14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
CDK5RAP3-204ENST00000577664 NFKBIEO00221 500 aa14.2□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ZBTB1Q9Y2K1 713 aa14.2□□□□□ -0.14
CDK5RAP3-204ENST00000577664 FLIIQ13045 1269 aa14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 G2E3Q7L622 706 aa14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 NOB1Q9ULX3 412 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 IBTKQ9P2D0 1353 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ZKSCAN2Q63HK3 967 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ATF7IPQ6VMQ6 1270 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 NECTIN2Q92692 538 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 DLEC1Q9Y238 1755 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 A0A087WZG4 1122 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 TCERG1O14776 1098 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 MS4A1P11836 297 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 RFC4P35249 363 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 DDR1Q08345 913 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 KSR2Q6VAB6 950 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 API5Q9BZZ5 524 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 SCN4AP35499 1836 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 DDX58O95786 925 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ANXA1P04083 346 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 MYL6BP14649 208 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 XAGE3Q8WTP9 111 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 BEGAINQ9BUH8 593 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ADAMTSL1Q8N6G6 1762 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 TRIM27P14373 513 aa14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 L3MBTL3Q96JM7 780 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ABCC4O15439 1325 aa14.15□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PI4KAP2A4QPH2 592 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 INTS3Q68E01 1043 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PI4KAP1Q8N8J0 262 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 COL15A1P39059 1388 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DDNO94850 711 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TM4SF1P30408 202 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ERFEQ4G0M1 354 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TTLL7Q6ZT98 887 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TTLL6Q8N841 843 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 GCC1Q96CN9 775 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TAF1DQ9H5J8 278 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CA12O43570 354 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FKBP8Q14318 412 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DZIP3Q86Y13 1208 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DZIP1LQ8IYY4 767 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 LTBP3Q9NS15 1303 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PLIN1O60240 522 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 AIMP1Q12904 312 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TCIRG1Q13488 830 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DGKZQ13574 1117 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 BEND3Q5T5X7 828 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 MAP3K2Q9Y2U5 619 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 RLBP1P12271 317 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ECE1P42892 770 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CCT4P50991 539 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 LINS1Q8NG48 757 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CAPNS2Q96L46 248 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 GPR101Q96P66 508 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ISCA1Q9BUE6 129 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 F6X3S4 739 aa14.09□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ALDH1L1O75891 902 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms