RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 HSH2DQ96JZ2 352 aa6.88□□□□□ -1.31
TOP2A-202ENST00000577541 AKTIPQ9H8T0 292 aa6.88□□□□□ -1.31
TOP2A-202ENST00000577541 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
TOP2A-202ENST00000577541 SCHIP1Q9P0W5 487 aaPredicted RBP6.88□□□□□ -1.31
TOP2A-202ENST00000577541 BACH1O14867 736 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 ALX3O95076 343 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 EIF4G2P78344 907 aaKnown RBP eCLIP6.87□□□□□ -1.31
TOP2A-202ENST00000577541 TBCELQ5QJ74 424 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 ZNF280CQ8ND82 737 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 RHPN1Q8TCX5 695 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 PCMTD1Q96MG8 357 aaPredicted RBP6.87□□□□□ -1.31
TOP2A-202ENST00000577541 ANKIB1Q9P2G1 1089 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 ZNF232Q9UNY5 417 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
TOP2A-202ENST00000577541 SFI1A8K8P3 1242 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 SPINK2P20155 84 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 GRIK1P39086 918 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 INTS5Q6P9B9 1019 aaKnown RBP6.86□□□□□ -1.31
TOP2A-202ENST00000577541 EFCC1Q9HA90 598 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 RAXQ9Y2V3 346 aa6.86□□□□□ -1.31
TOP2A-202ENST00000577541 DEAF1O75398 565 aaPredicted RBP6.85□□□□□ -1.31
TOP2A-202ENST00000577541 WNT11O96014 354 aa6.85□□□□□ -1.31
TOP2A-202ENST00000577541 C8AP07357 584 aa6.85□□□□□ -1.31
TOP2A-202ENST00000577541 GOPCQ9HD26 462 aa6.85□□□□□ -1.31
TOP2A-202ENST00000577541 SNRKQ9NRH2 765 aa6.85□□□□□ -1.31
TOP2A-202ENST00000577541 EPHA4P54764 986 aa6.84□□□□□ -1.31
TOP2A-202ENST00000577541 TYRO3Q06418 890 aa6.84□□□□□ -1.31
TOP2A-202ENST00000577541 DTX1Q86Y01 620 aa6.84□□□□□ -1.31
TOP2A-202ENST00000577541 WFDC8Q8IUA0 241 aa6.84□□□□□ -1.31
TOP2A-202ENST00000577541 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.31
TOP2A-202ENST00000577541 DLL1O00548 723 aa6.83□□□□□ -1.32
TOP2A-202ENST00000577541 FAM35AQ86V20 835 aa6.83□□□□□ -1.32
TOP2A-202ENST00000577541 ZDHHC13Q8IUH4 622 aa6.83□□□□□ -1.32
TOP2A-202ENST00000577541 PLPP7Q8NBV4 271 aa6.83□□□□□ -1.32
TOP2A-202ENST00000577541 STOML1Q9UBI4 398 aa6.83□□□□□ -1.32
TOP2A-202ENST00000577541 SERTM1A2A2V5 107 aa6.82□□□□□ -1.32
TOP2A-202ENST00000577541 APBB1O00213 710 aa6.82□□□□□ -1.32
TOP2A-202ENST00000577541 BRPF1P55201 1214 aaPredicted RBP6.82□□□□□ -1.32
TOP2A-202ENST00000577541 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
TOP2A-202ENST00000577541 BANK1Q8NDB2 785 aa6.82□□□□□ -1.32
TOP2A-202ENST00000577541 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
TOP2A-202ENST00000577541 F8W735 103 aaPredicted RBP6.81□□□□□ -1.32
TOP2A-202ENST00000577541 IRF5Q13568 498 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 C1orf53Q5VUE5 145 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 POU5F2Q8N7G0 328 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 LPIN3Q9BQK8 851 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 ZNF358Q9NW07 568 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
TOP2A-202ENST00000577541 CPB1P15086 417 aa6.8□□□□□ -1.32
TOP2A-202ENST00000577541 PCSK7Q16549 785 aa6.8□□□□□ -1.32
TOP2A-202ENST00000577541 TNS4Q8IZW8 715 aa6.8□□□□□ -1.32
TOP2A-202ENST00000577541 PNMA5Q96PV4 448 aa6.8□□□□□ -1.32
TOP2A-202ENST00000577541 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.8□□□□□ -1.32
TOP2A-202ENST00000577541 SUSD3Q96L08 255 aa6.79□□□□□ -1.32
TOP2A-202ENST00000577541 GSX2Q9BZM3 304 aa6.79□□□□□ -1.32
TOP2A-202ENST00000577541 TBC1D2BQ9UPU7 963 aa6.79□□□□□ -1.32
TOP2A-202ENST00000577541 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
TOP2A-202ENST00000577541 NFIAQ12857 509 aa6.78□□□□□ -1.32
TOP2A-202ENST00000577541 PERM1Q5SV97 790 aa6.78□□□□□ -1.32
TOP2A-202ENST00000577541 Q6ZS46 218 aa6.78□□□□□ -1.32
TOP2A-202ENST00000577541 TTC9Q92623 222 aa6.78□□□□□ -1.32
TOP2A-202ENST00000577541 ZBTB42B2RXF5 422 aa6.77□□□□□ -1.33
TOP2A-202ENST00000577541 DHX15O43143 795 aaKnown RBP6.77□□□□□ -1.33
TOP2A-202ENST00000577541 GLB1P16278 677 aa6.77□□□□□ -1.33
TOP2A-202ENST00000577541 ELMSAN1Q6PJG2 1045 aa6.77□□□□□ -1.33
TOP2A-202ENST00000577541 PRR19A6NJB7 356 aa6.76□□□□□ -1.33
TOP2A-202ENST00000577541 NFKB1P19838 968 aa6.76□□□□□ -1.33
TOP2A-202ENST00000577541 FBLN7Q53RD9 439 aa6.76□□□□□ -1.33
TOP2A-202ENST00000577541 PIK3CDO00329 1044 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 VAC14Q08AM6 782 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 CCINQ13939 588 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 BTLAQ7Z6A9 289 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 ABI1Q8IZP0 508 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 AGGF1Q8N302 714 aaeCLIP6.75□□□□□ -1.33
TOP2A-202ENST00000577541 CCER1Q8TC90 406 aaPredicted RBP6.75□□□□□ -1.33
TOP2A-202ENST00000577541 ASIC4Q96FT7 647 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 UBL7Q96S82 380 aaPredicted RBP6.75□□□□□ -1.33
TOP2A-202ENST00000577541 PHACTR1Q9C0D0 580 aa6.75□□□□□ -1.33
TOP2A-202ENST00000577541 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
TOP2A-202ENST00000577541 GRNP28799 593 aaKnown RBP6.74□□□□□ -1.33
TOP2A-202ENST00000577541 HIRAP54198 1017 aaPredicted RBP6.74□□□□□ -1.33
TOP2A-202ENST00000577541 POTEAQ6S8J7 498 aa6.74□□□□□ -1.33
TOP2A-202ENST00000577541 RNF43Q68DV7 783 aa6.73□□□□□ -1.33
TOP2A-202ENST00000577541 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
TOP2A-202ENST00000577541 CHMP3Q9Y3E7 222 aa6.73□□□□□ -1.33
TOP2A-202ENST00000577541 MAP3K6O95382 1288 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 PSMA6P60900 246 aaKnown RBP6.72□□□□□ -1.33
TOP2A-202ENST00000577541 GTF2IP78347 998 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 PSME1Q06323 249 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 C7orf69Q9H7B7 122 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 ZFATQ9P243 1243 aa6.72□□□□□ -1.33
TOP2A-202ENST00000577541 MLLT1Q03111 559 aaPredicted RBP6.71□□□□□ -1.34
TOP2A-202ENST00000577541 TRIM42Q8IWZ5 723 aa6.71□□□□□ -1.34
TOP2A-202ENST00000577541 TRPM4Q8TD43 1214 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 985.7 ms