RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
NCBP3-207ENST00000577169 SYNE4Q8N205 404 aa20.11■□□□□ 0.81
NCBP3-207ENST00000577169 PI4KAP1Q8N8J0 262 aa20.11■□□□□ 0.81
NCBP3-207ENST00000577169 MYD88Q99836 296 aa20.11■□□□□ 0.81
NCBP3-207ENST00000577169 METTL22Q9BUU2 404 aaPredicted RBP20.11■□□□□ 0.81
NCBP3-207ENST00000577169 TRMT112Q9UI30 125 aaKnown RBP20.11■□□□□ 0.81
NCBP3-207ENST00000577169 MAP3K2Q9Y2U5 619 aa20.11■□□□□ 0.81
NCBP3-207ENST00000577169 IBTKQ9P2D0 1353 aaPredicted RBP20.1■□□□□ 0.81
NCBP3-207ENST00000577169 FLIIQ13045 1269 aa20.1■□□□□ 0.81
NCBP3-207ENST00000577169 SLC10A5Q5PT55 438 aa20.1■□□□□ 0.81
NCBP3-207ENST00000577169 STYK1Q6J9G0 422 aa20.1■□□□□ 0.81
NCBP3-207ENST00000577169 ARHGAP27Q6ZUM4 889 aa20.1■□□□□ 0.81
NCBP3-207ENST00000577169 MASTLQ96GX5 879 aa20.1■□□□□ 0.81
NCBP3-207ENST00000577169 ABCC12Q96J65 1359 aa20.09■□□□□ 0.81
NCBP3-207ENST00000577169 ARFGEF2Q9Y6D5 1785 aa20.09■□□□□ 0.81
NCBP3-207ENST00000577169 CACNA1FO60840 1977 aa20.09■□□□□ 0.81
NCBP3-207ENST00000577169 NPR1P16066 1061 aa20.08■□□□□ 0.81
NCBP3-207ENST00000577169 CNKSR1Q969H4 720 aa20.08■□□□□ 0.81
NCBP3-207ENST00000577169 DLEC1Q9Y238 1755 aa20.08■□□□□ 0.8
NCBP3-207ENST00000577169 ADCY9O60503 1353 aa20.08■□□□□ 0.8
NCBP3-207ENST00000577169 HCLS1P14317 486 aaPredicted RBP20.07■□□□□ 0.8
NCBP3-207ENST00000577169 YY1P25490 414 aa20.07■□□□□ 0.8
NCBP3-207ENST00000577169 FKBP5Q13451 457 aaPredicted RBP20.07■□□□□ 0.8
NCBP3-207ENST00000577169 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
NCBP3-207ENST00000577169 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
NCBP3-207ENST00000577169 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
NCBP3-207ENST00000577169 SH3TC1Q8TE82 1336 aa20.06■□□□□ 0.8
NCBP3-207ENST00000577169 CHD4Q14839 1912 aa20.06■□□□□ 0.8
NCBP3-207ENST00000577169 COL11A2P13942 1736 aaPredicted RBP20.06■□□□□ 0.8
NCBP3-207ENST00000577169 C3orf67Q6ZVT6 689 aa20.06■□□□□ 0.8
NCBP3-207ENST00000577169 CCDC191Q8NCU4 936 aa20.06■□□□□ 0.8
NCBP3-207ENST00000577169 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
NCBP3-207ENST00000577169 ARFGEF1Q9Y6D6 1849 aa20.05■□□□□ 0.8
NCBP3-207ENST00000577169 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
NCBP3-207ENST00000577169 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
NCBP3-207ENST00000577169 MRPL50Q8N5N7 158 aaKnown RBP20.05■□□□□ 0.8
NCBP3-207ENST00000577169 C21orf2O43822 256 aa20.04■□□□□ 0.8
NCBP3-207ENST00000577169 IGKV5-2P06315 115 aa20.04■□□□□ 0.8
NCBP3-207ENST00000577169 NEXNQ0ZGT2 675 aa20.04■□□□□ 0.8
NCBP3-207ENST00000577169 DNAAF4Q8WXU2 420 aa20.04■□□□□ 0.8
NCBP3-207ENST00000577169 JARID2Q92833 1246 aaPredicted RBP20.04■□□□□ 0.8
NCBP3-207ENST00000577169 CWC25Q9NXE8 425 aaPredicted RBP20.04■□□□□ 0.8
NCBP3-207ENST00000577169 TNRC6CQ9HCJ0 1690 aaKnown RBP20.03■□□□□ 0.8
NCBP3-207ENST00000577169 RIC1Q4ADV7 1423 aa20.03■□□□□ 0.8
NCBP3-207ENST00000577169 ALDH1B1P30837 517 aa20.03■□□□□ 0.8
NCBP3-207ENST00000577169 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
NCBP3-207ENST00000577169 ZBTB38Q8NAP3 1195 aaPredicted RBP20.03■□□□□ 0.8
NCBP3-207ENST00000577169 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
NCBP3-207ENST00000577169 RPGRQ92834 1020 aaKnown RBP20.03■□□□□ 0.8
NCBP3-207ENST00000577169 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
NCBP3-207ENST00000577169 F6X3S4 739 aa20.02■□□□□ 0.8
NCBP3-207ENST00000577169 HOXA10P31260 410 aaPredicted RBP20.02■□□□□ 0.8
NCBP3-207ENST00000577169 CWF19L2Q2TBE0 894 aaKnown RBP20.02■□□□□ 0.8
NCBP3-207ENST00000577169 RBM17Q96I25 401 aaKnown RBP20.02■□□□□ 0.8
NCBP3-207ENST00000577169 IRS4O14654 1257 aaPredicted RBP20.01■□□□□ 0.79
NCBP3-207ENST00000577169 PCCAP05165 728 aaPredicted RBP20.01■□□□□ 0.79
NCBP3-207ENST00000577169 CACNA1SQ13698 1873 aa20.01■□□□□ 0.79
NCBP3-207ENST00000577169 NEURL1BA8MQ27 555 aa20■□□□□ 0.79
NCBP3-207ENST00000577169 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
NCBP3-207ENST00000577169 ALDH1L2Q3SY69 923 aa20■□□□□ 0.79
NCBP3-207ENST00000577169 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
NCBP3-207ENST00000577169 CRAMP1Q96RY5 1269 aa20■□□□□ 0.79
NCBP3-207ENST00000577169 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
NCBP3-207ENST00000577169 LINS1Q8NG48 757 aa19.99■□□□□ 0.79
NCBP3-207ENST00000577169 ZBED9Q6R2W3 1325 aa19.98■□□□□ 0.79
NCBP3-207ENST00000577169 H7C1W4 665 aa19.97■□□□□ 0.79
NCBP3-207ENST00000577169 RASSF7Q02833 373 aa19.97■□□□□ 0.79
NCBP3-207ENST00000577169 GCKRQ14397 625 aa19.97■□□□□ 0.79
NCBP3-207ENST00000577169 SF3B3Q15393 1217 aaKnown RBP19.97■□□□□ 0.79
NCBP3-207ENST00000577169 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
NCBP3-207ENST00000577169 SMC4Q9NTJ3 1288 aa19.97■□□□□ 0.79
NCBP3-207ENST00000577169 LAMB2P55268 1798 aa19.97■□□□□ 0.79
NCBP3-207ENST00000577169 SLC4A10Q6U841 1118 aa19.96■□□□□ 0.79
NCBP3-207ENST00000577169 OLFM4Q6UX06 510 aa19.96■□□□□ 0.79
NCBP3-207ENST00000577169 DDX46Q7L014 1031 aaKnown RBP19.96■□□□□ 0.79
NCBP3-207ENST00000577169 DDX60Q8IY21 1712 aaKnown RBP19.96■□□□□ 0.79
NCBP3-207ENST00000577169 NFKBIEO00221 500 aa19.95■□□□□ 0.78
NCBP3-207ENST00000577169 PDE8AO60658 829 aa19.95■□□□□ 0.78
NCBP3-207ENST00000577169 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
NCBP3-207ENST00000577169 RARSP54136 660 aaKnown RBP19.95■□□□□ 0.78
NCBP3-207ENST00000577169 SOGA3Q5TF21 947 aa19.95■□□□□ 0.78
NCBP3-207ENST00000577169 C9orf131Q5VYM1 1079 aa19.95■□□□□ 0.78
NCBP3-207ENST00000577169 PRELPP51888 382 aa19.94■□□□□ 0.78
NCBP3-207ENST00000577169 ABCC4O15439 1325 aa19.94■□□□□ 0.78
NCBP3-207ENST00000577169 PTPRCP08575 1304 aa19.94■□□□□ 0.78
NCBP3-207ENST00000577169 CDHR2Q9BYE9 1310 aa19.94■□□□□ 0.78
NCBP3-207ENST00000577169 SBF1O95248 1867 aa19.93■□□□□ 0.78
NCBP3-207ENST00000577169 PPEF1O14829 653 aaPredicted RBP19.93■□□□□ 0.78
NCBP3-207ENST00000577169 BBOX1O75936 387 aa19.93■□□□□ 0.78
NCBP3-207ENST00000577169 CCDC93Q567U6 631 aa19.93■□□□□ 0.78
NCBP3-207ENST00000577169 UBE3BQ7Z3V4 1068 aa19.93■□□□□ 0.78
NCBP3-207ENST00000577169 RNF181Q9P0P0 153 aa19.93■□□□□ 0.78
NCBP3-207ENST00000577169 GRAPQ13588 217 aa19.92■□□□□ 0.78
NCBP3-207ENST00000577169 GRAPLQ8TC17 118 aaPredicted RBP19.92■□□□□ 0.78
NCBP3-207ENST00000577169 NOB1Q9ULX3 412 aaKnown RBP19.92■□□□□ 0.78
NCBP3-207ENST00000577169 TAF1P21675 1872 aa19.92■□□□□ 0.78
NCBP3-207ENST00000577169 FER1L6Q2WGJ9 1857 aa19.91■□□□□ 0.78
NCBP3-207ENST00000577169 LMNB1P20700 586 aa19.91■□□□□ 0.78
NCBP3-207ENST00000577169 BRPF1P55201 1214 aaPredicted RBP19.91■□□□□ 0.78
NCBP3-207ENST00000577169 CASP7P55210 303 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms