RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
NDE1-211ENST00000576502 NLRP3Q96P20 1036 aa17.83■□□□□ 0.44
NDE1-211ENST00000576502 STK31Q9BXU1 1019 aa17.83■□□□□ 0.44
NDE1-211ENST00000576502 TAOK3Q9H2K8 898 aa17.83■□□□□ 0.44
NDE1-211ENST00000576502 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
NDE1-211ENST00000576502 SLX4Q8IY92 1834 aa17.83■□□□□ 0.44
NDE1-211ENST00000576502 FER1L6Q2WGJ9 1857 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 ABCC12Q96J65 1359 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 C1QTNF8P60827 252 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 RASSF7Q02833 373 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 CRY2Q49AN0 593 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
NDE1-211ENST00000576502 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
NDE1-211ENST00000576502 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
NDE1-211ENST00000576502 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
NDE1-211ENST00000576502 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
NDE1-211ENST00000576502 RIC3Q7Z5B4 369 aa17.81■□□□□ 0.44
NDE1-211ENST00000576502 NLRP10Q86W26 655 aa17.81■□□□□ 0.44
NDE1-211ENST00000576502 RTKN2Q8IZC4 609 aa17.81■□□□□ 0.44
NDE1-211ENST00000576502 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
NDE1-211ENST00000576502 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
NDE1-211ENST00000576502 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
NDE1-211ENST00000576502 NFKBIEO00221 500 aa17.8■□□□□ 0.44
NDE1-211ENST00000576502 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
NDE1-211ENST00000576502 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
NDE1-211ENST00000576502 TNRC6CQ9HCJ0 1690 aaKnown RBP17.8■□□□□ 0.44
NDE1-211ENST00000576502 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
NDE1-211ENST00000576502 HOXA10P31260 410 aaPredicted RBP17.79■□□□□ 0.44
NDE1-211ENST00000576502 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
NDE1-211ENST00000576502 TSR2Q969E8 191 aaKnown RBP17.79■□□□□ 0.44
NDE1-211ENST00000576502 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
NDE1-211ENST00000576502 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
NDE1-211ENST00000576502 CRAMP1Q96RY5 1269 aa17.78■□□□□ 0.44
NDE1-211ENST00000576502 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
NDE1-211ENST00000576502 CACNA1FO60840 1977 aa17.78■□□□□ 0.44
NDE1-211ENST00000576502 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
NDE1-211ENST00000576502 DPY19L2Q6NUT2 758 aa17.77■□□□□ 0.44
NDE1-211ENST00000576502 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
NDE1-211ENST00000576502 SENP3-EIF4A1A0A087X0R7 540 aa17.76■□□□□ 0.43
NDE1-211ENST00000576502 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
NDE1-211ENST00000576502 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
NDE1-211ENST00000576502 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
NDE1-211ENST00000576502 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
NDE1-211ENST00000576502 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
NDE1-211ENST00000576502 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
NDE1-211ENST00000576502 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
NDE1-211ENST00000576502 GLTPD2A6NH11 291 aa17.74■□□□□ 0.43
NDE1-211ENST00000576502 ATP5J2-PTCD1G3V325 749 aa17.74■□□□□ 0.43
NDE1-211ENST00000576502 PPEF1O14829 653 aaPredicted RBP17.74■□□□□ 0.43
NDE1-211ENST00000576502 NEXNQ0ZGT2 675 aa17.74■□□□□ 0.43
NDE1-211ENST00000576502 CCER2I3L3R5 266 aa17.73■□□□□ 0.43
NDE1-211ENST00000576502 KIF3CO14782 793 aa17.73■□□□□ 0.43
NDE1-211ENST00000576502 TOMM70O94826 608 aa17.73■□□□□ 0.43
NDE1-211ENST00000576502 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
NDE1-211ENST00000576502 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
NDE1-211ENST00000576502 PSMD1Q99460 953 aa17.73■□□□□ 0.43
NDE1-211ENST00000576502 BBOX1O75936 387 aa17.72■□□□□ 0.43
NDE1-211ENST00000576502 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
NDE1-211ENST00000576502 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
NDE1-211ENST00000576502 MYD88Q99836 296 aa17.72■□□□□ 0.43
NDE1-211ENST00000576502 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
NDE1-211ENST00000576502 NMRK2Q9NPI5 230 aa17.72■□□□□ 0.43
NDE1-211ENST00000576502 LAMB2P55268 1798 aa17.71■□□□□ 0.43
NDE1-211ENST00000576502 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
NDE1-211ENST00000576502 ZBTB38Q8NAP3 1195 aaPredicted RBP17.71■□□□□ 0.43
NDE1-211ENST00000576502 JDP2Q8WYK2 163 aa17.71■□□□□ 0.43
NDE1-211ENST00000576502 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
NDE1-211ENST00000576502 VEGFAP15692 232 aaPredicted RBP17.7■□□□□ 0.42
NDE1-211ENST00000576502 IARSP41252 1262 aaKnown RBP17.7■□□□□ 0.42
NDE1-211ENST00000576502 PRELPP51888 382 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 SUPT20HQ8NEM7 779 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 FAM89AQ96GI7 184 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 ABCC4O15439 1325 aa17.7■□□□□ 0.42
NDE1-211ENST00000576502 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
NDE1-211ENST00000576502 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
NDE1-211ENST00000576502 GRAPQ13588 217 aa17.69■□□□□ 0.42
NDE1-211ENST00000576502 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
NDE1-211ENST00000576502 RBM46Q8TBY0 533 aaKnown RBP17.69■□□□□ 0.42
NDE1-211ENST00000576502 GRAPLQ8TC17 118 aaPredicted RBP17.69■□□□□ 0.42
NDE1-211ENST00000576502 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
NDE1-211ENST00000576502 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
NDE1-211ENST00000576502 PI4KAP2A4QPH2 592 aa17.68■□□□□ 0.42
NDE1-211ENST00000576502 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
NDE1-211ENST00000576502 SF3B3Q15393 1217 aaKnown RBP17.68■□□□□ 0.42
NDE1-211ENST00000576502 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
NDE1-211ENST00000576502 PI4KAP1Q8N8J0 262 aa17.68■□□□□ 0.42
NDE1-211ENST00000576502 VPS33BQ9H267 617 aa17.68■□□□□ 0.42
NDE1-211ENST00000576502 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
NDE1-211ENST00000576502 VAMP4O75379 141 aa17.67■□□□□ 0.42
NDE1-211ENST00000576502 FLIIQ13045 1269 aa17.67■□□□□ 0.42
NDE1-211ENST00000576502 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
NDE1-211ENST00000576502 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
NDE1-211ENST00000576502 SP8Q8IXZ3 490 aa17.67■□□□□ 0.42
NDE1-211ENST00000576502 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
NDE1-211ENST00000576502 E9PSI1 815 aa17.66■□□□□ 0.42
NDE1-211ENST00000576502 FSTL1Q12841 308 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms