RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ABCC10Q5T3U5 1492 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 CHL1O00533 1208 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 CBFA2T2O43439 604 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 BRMS1Q9HCU9 246 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 KIF4BQ2VIQ3 1234 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 COPS6Q7L5N1 327 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 SMARCE1Q969G3 411 aa20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 CWC15Q9P013 229 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-214ENST00000576409 MAP3K19Q56UN5 1328 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 GNG11P61952 73 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 UNC5CLQ8IV45 518 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 CNNM3Q8NE01 707 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 SHANK2Q9UPX8 1470 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 METTL24Q5JXM2 366 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 CCDC129Q6ZRS4 1044 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 AK7Q96M32 723 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 MINDY4BA8MYZ0 360 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 PLEKHF1Q96S99 279 aa20.81■□□□□ 0.92
ATPAF1-214ENST00000576409 LRMPQ12912 555 aa20.8■□□□□ 0.92
ATPAF1-214ENST00000576409 APOBRQ0VD83 1088 aa20.8■□□□□ 0.92
ATPAF1-214ENST00000576409 EDC3Q96F86 508 aaKnown RBP20.8■□□□□ 0.92
ATPAF1-214ENST00000576409 NPHP3Q7Z494 1330 aa20.8■□□□□ 0.92
ATPAF1-214ENST00000576409 XAGE3Q8WTP9 111 aa20.8■□□□□ 0.92
ATPAF1-214ENST00000576409 PHF8Q9UPP1 1060 aa20.8■□□□□ 0.92
ATPAF1-214ENST00000576409 CTAGE5O15320 804 aa20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 EPB41L2O43491 1005 aaKnown RBP20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 DHX8Q14562 1220 aaKnown RBP20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 AIDAQ96BJ3 306 aa20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 ZNF213O14771 459 aa20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 PDIA4P13667 645 aaKnown RBP20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 GRM8O00222 908 aa20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 GPTP24298 496 aa20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
ATPAF1-214ENST00000576409 SGSM2O43147 1006 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 G3V3G9 751 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 DCAF8Q5TAQ9 597 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 OTUD7BQ6GQQ9 843 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 KIF6Q6ZMV9 814 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 HYPKQ9NX55 129 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 KLF18A0A0U1RQI7 1052 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 A0A1B0GVL5 298 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 NOM1Q5C9Z4 860 aaKnown RBP20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 CENPHQ9H3R5 247 aa20.78■□□□□ 0.92
ATPAF1-214ENST00000576409 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 SETQ01105 290 aaPredicted RBP20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 MPHOSPH8Q99549 860 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 PAXBP1Q9Y5B6 917 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 RXRAP19793 462 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 DNA2P51530 1060 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 LMBR1LQ6UX01 489 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 RUFY3Q7L099 469 aa20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
ATPAF1-214ENST00000576409 KIF2AO00139 706 aaPredicted RBP20.77■□□□□ 0.91
ATPAF1-214ENST00000576409 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.91
ATPAF1-214ENST00000576409 SYT10Q6XYQ8 523 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 KRT222Q8N1A0 295 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 MYRIPQ8NFW9 859 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 CEP89Q96ST8 783 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 LRP2BPQ9P2M1 347 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 JAK2O60674 1132 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 UBASH3AP57075 661 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 ANKRD13DQ6ZTN6 518 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 NOL10Q9BSC4 688 aaKnown RBP20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 ABCC4O15439 1325 aa20.76■□□□□ 0.91
ATPAF1-214ENST00000576409 CDKL5O76039 1030 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 TSPYL1Q9H0U9 437 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 IFNKQ9P0W0 207 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 RIMS2Q9UQ26 1411 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 CASQ1P31415 396 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 CCDC171Q6TFL3 1326 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 LIG1P18858 919 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 GTF3C6Q969F1 213 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 MAGEC2Q9UBF1 373 aaPredicted RBP20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 IBSPP21815 317 aaPredicted RBP20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 GSDMDP57764 484 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 CBX8Q9HC52 389 aa20.75■□□□□ 0.91
ATPAF1-214ENST00000576409 ZSCAN12O43309 604 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 NACAP1Q9BZK3 213 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 HMGB1P09429 215 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 CHRNA2Q15822 529 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 LGR6Q9HBX8 967 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 RAI14Q9P0K7 980 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 IFIT3O14879 490 aaKnown RBP20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 NEMFO60524 1076 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 ERLIN1O75477 346 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 MCM6Q14566 821 aa20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 ZSCAN16Q9H4T2 348 aaPredicted RBP20.74■□□□□ 0.91
ATPAF1-214ENST00000576409 LMAN1P49257 510 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 NAPBQ9H115 298 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 NPATQ14207 1427 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 KSR2Q6VAB6 950 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 PUS7Q96PZ0 661 aaKnown RBP20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
ATPAF1-214ENST00000576409 A0A087WWV3 80 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms