RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 DLEC1Q9Y238 1755 aa30.18■■■□□ 2.42
SNF8-217ENST00000576353 RIC1Q4ADV7 1423 aa30.17■■■□□ 2.42
SNF8-217ENST00000576353 TCERG1O14776 1098 aaKnown RBP30.17■■■□□ 2.42
SNF8-217ENST00000576353 SLC4A2P04920 1241 aa30.17■■■□□ 2.42
SNF8-217ENST00000576353 CRY2Q49AN0 593 aa30.17■■■□□ 2.42
SNF8-217ENST00000576353 SLC10A5Q5PT55 438 aa30.17■■■□□ 2.42
SNF8-217ENST00000576353 TRMT112Q9UI30 125 aaKnown RBP30.17■■■□□ 2.42
SNF8-217ENST00000576353 ARFGEF1Q9Y6D6 1849 aa30.17■■■□□ 2.42
SNF8-217ENST00000576353 ALDH1B1P30837 517 aa30.16■■■□□ 2.42
SNF8-217ENST00000576353 TRIM28Q13263 835 aaKnown RBP30.16■■■□□ 2.42
SNF8-217ENST00000576353 PRPF40BQ6NWY9 871 aaKnown RBP30.16■■■□□ 2.42
SNF8-217ENST00000576353 ATP5J2-PTCD1G3V325 749 aa30.15■■■□□ 2.42
SNF8-217ENST00000576353 NLRP3Q96P20 1036 aa30.15■■■□□ 2.42
SNF8-217ENST00000576353 E9PSI1 815 aa30.14■■■□□ 2.42
SNF8-217ENST00000576353 C21orf2O43822 256 aa30.14■■■□□ 2.42
SNF8-217ENST00000576353 SH3TC1Q8TE82 1336 aa30.14■■■□□ 2.42
SNF8-217ENST00000576353 SOGA3Q5TF21 947 aa30.13■■■□□ 2.41
SNF8-217ENST00000576353 KSR2Q6VAB6 950 aa30.13■■■□□ 2.41
SNF8-217ENST00000576353 RPGRQ92834 1020 aaKnown RBP30.13■■■□□ 2.41
SNF8-217ENST00000576353 COL11A2P13942 1736 aaPredicted RBP30.13■■■□□ 2.41
SNF8-217ENST00000576353 ZNF219Q9P2Y4 722 aaPredicted RBP30.12■■■□□ 2.41
SNF8-217ENST00000576353 MYD88Q99836 296 aa30.11■■■□□ 2.41
SNF8-217ENST00000576353 METTL22Q9BUU2 404 aaPredicted RBP30.11■■■□□ 2.41
SNF8-217ENST00000576353 HOXA10P31260 410 aaPredicted RBP30.1■■■□□ 2.41
SNF8-217ENST00000576353 C9orf131Q5VYM1 1079 aa30.1■■■□□ 2.41
SNF8-217ENST00000576353 RBM17Q96I25 401 aaKnown RBP30.1■■■□□ 2.41
SNF8-217ENST00000576353 MAP3K2Q9Y2U5 619 aa30.1■■■□□ 2.41
SNF8-217ENST00000576353 PI4KAP2A4QPH2 592 aa30.09■■■□□ 2.41
SNF8-217ENST00000576353 ADCY9O60503 1353 aa30.09■■■□□ 2.41
SNF8-217ENST00000576353 ANKRD36CQ5JPF3 1778 aa30.09■■■□□ 2.41
SNF8-217ENST00000576353 G2E3Q7L622 706 aa30.09■■■□□ 2.41
SNF8-217ENST00000576353 PI4KAP1Q8N8J0 262 aa30.09■■■□□ 2.41
SNF8-217ENST00000576353 SLFN5Q08AF3 891 aa30.08■■■□□ 2.41
SNF8-217ENST00000576353 FLIIQ13045 1269 aa30.08■■■□□ 2.41
SNF8-217ENST00000576353 HCLS1P14317 486 aaPredicted RBP30.07■■■□□ 2.4
SNF8-217ENST00000576353 SYNE4Q8N205 404 aa30.07■■■□□ 2.4
SNF8-217ENST00000576353 CCDC191Q8NCU4 936 aa30.07■■■□□ 2.4
SNF8-217ENST00000576353 C7orf43Q8WVR3 580 aa30.07■■■□□ 2.4
SNF8-217ENST00000576353 FAM89AQ96GI7 184 aa30.07■■■□□ 2.4
SNF8-217ENST00000576353 CRAMP1Q96RY5 1269 aa30.07■■■□□ 2.4
SNF8-217ENST00000576353 RASSF7Q02833 373 aa30.06■■■□□ 2.4
SNF8-217ENST00000576353 NEXNQ0ZGT2 675 aa30.06■■■□□ 2.4
SNF8-217ENST00000576353 C3orf67Q6ZVT6 689 aa30.06■■■□□ 2.4
SNF8-217ENST00000576353 ZNF428Q96B54 188 aa30.06■■■□□ 2.4
SNF8-217ENST00000576353 RNF181Q9P0P0 153 aa30.06■■■□□ 2.4
SNF8-217ENST00000576353 TNRC6CQ9HCJ0 1690 aaKnown RBP30.05■■■□□ 2.4
SNF8-217ENST00000576353 NFKBIEO00221 500 aa30.05■■■□□ 2.4
SNF8-217ENST00000576353 LMNB1P20700 586 aa30.05■■■□□ 2.4
SNF8-217ENST00000576353 HSP90B1P14625 803 aaKnown RBP30.04■■■□□ 2.4
SNF8-217ENST00000576353 FKBP5Q13451 457 aaPredicted RBP30.04■■■□□ 2.4
SNF8-217ENST00000576353 CCDC93Q567U6 631 aa30.04■■■□□ 2.4
SNF8-217ENST00000576353 ZBTB38Q8NAP3 1195 aaPredicted RBP30.04■■■□□ 2.4
SNF8-217ENST00000576353 CWC25Q9NXE8 425 aaPredicted RBP30.04■■■□□ 2.4
SNF8-217ENST00000576353 ARFGEF2Q9Y6D5 1785 aa30.03■■■□□ 2.4
SNF8-217ENST00000576353 SLX4Q8IY92 1834 aa30.02■■■□□ 2.4
SNF8-217ENST00000576353 CDCA7LQ96GN5 454 aa30.02■■■□□ 2.4
SNF8-217ENST00000576353 TAOK3Q9H2K8 898 aa30.02■■■□□ 2.4
SNF8-217ENST00000576353 LTBP3Q9NS15 1303 aa30.01■■■□□ 2.4
SNF8-217ENST00000576353 RTKN2Q8IZC4 609 aa30.01■■■□□ 2.39
SNF8-217ENST00000576353 IRS4O14654 1257 aaPredicted RBP30■■■□□ 2.39
SNF8-217ENST00000576353 PCCAP05165 728 aaPredicted RBP30■■■□□ 2.39
SNF8-217ENST00000576353 RTL5Q5HYW3 569 aaPredicted RBP30■■■□□ 2.39
SNF8-217ENST00000576353 CC2D2BQ6DHV5 1058 aa30■■■□□ 2.39
SNF8-217ENST00000576353 GPBP1L1Q9HC44 474 aaPredicted RBP30■■■□□ 2.39
SNF8-217ENST00000576353 IGKV5-2P06315 115 aa29.99■■■□□ 2.39
SNF8-217ENST00000576353 DDX46Q7L014 1031 aaKnown RBP29.99■■■□□ 2.39
SNF8-217ENST00000576353 DNAAF4Q8WXU2 420 aa29.99■■■□□ 2.39
SNF8-217ENST00000576353 GRIPAP1Q4V328 841 aa29.98■■■□□ 2.39
SNF8-217ENST00000576353 TRMT2AQ8IZ69 625 aaKnown RBP29.98■■■□□ 2.39
SNF8-217ENST00000576353 PRELPP51888 382 aa29.97■■■□□ 2.39
SNF8-217ENST00000576353 SF3B3Q15393 1217 aaKnown RBP29.97■■■□□ 2.39
SNF8-217ENST00000576353 ZNF526Q8TF50 670 aaPredicted RBP29.97■■■□□ 2.39
SNF8-217ENST00000576353 TMX4Q9H1E5 349 aaPredicted RBP29.97■■■□□ 2.39
SNF8-217ENST00000576353 ZC3H4Q9UPT8 1303 aaKnown RBP29.96■■■□□ 2.39
SNF8-217ENST00000576353 PPEF1O14829 653 aaPredicted RBP29.96■■■□□ 2.39
SNF8-217ENST00000576353 BBOX1O75936 387 aa29.96■■■□□ 2.39
SNF8-217ENST00000576353 ABCC4O15439 1325 aa29.96■■■□□ 2.39
SNF8-217ENST00000576353 NEURL1BA8MQ27 555 aa29.95■■■□□ 2.39
SNF8-217ENST00000576353 FKBP4Q02790 459 aaKnown RBP eCLIP29.95■■■□□ 2.39
SNF8-217ENST00000576353 OLFM4Q6UX06 510 aa29.95■■■□□ 2.39
SNF8-217ENST00000576353 CWF19L2Q2TBE0 894 aaKnown RBP29.94■■■□□ 2.38
SNF8-217ENST00000576353 LINS1Q8NG48 757 aa29.94■■■□□ 2.38
SNF8-217ENST00000576353 GRAPQ13588 217 aa29.93■■■□□ 2.38
SNF8-217ENST00000576353 GRAPLQ8TC17 118 aaPredicted RBP29.93■■■□□ 2.38
SNF8-217ENST00000576353 CACNA1FO60840 1977 aa29.93■■■□□ 2.38
SNF8-217ENST00000576353 PDE8AO60658 829 aa29.92■■■□□ 2.38
SNF8-217ENST00000576353 ATP6V0A2Q9Y487 856 aa29.92■■■□□ 2.38
SNF8-217ENST00000576353 CDHR2Q9BYE9 1310 aa29.92■■■□□ 2.38
SNF8-217ENST00000576353 CT47B1P0C2W7 299 aaPredicted RBP29.91■■■□□ 2.38
SNF8-217ENST00000576353 JARID2Q92833 1246 aaPredicted RBP29.91■■■□□ 2.38
SNF8-217ENST00000576353 PSMD1Q99460 953 aa29.91■■■□□ 2.38
SNF8-217ENST00000576353 CACNA1SQ13698 1873 aa29.91■■■□□ 2.38
SNF8-217ENST00000576353 FER1L6Q2WGJ9 1857 aa29.91■■■□□ 2.38
SNF8-217ENST00000576353 HNRNPUQ00839 825 aaKnown RBP eCLIP29.9■■■□□ 2.38
SNF8-217ENST00000576353 GCKRQ14397 625 aa29.9■■■□□ 2.38
SNF8-217ENST00000576353 TMC4Q7Z404 712 aa29.9■■■□□ 2.38
SNF8-217ENST00000576353 KDM2BQ8NHM5 1336 aa29.9■■■□□ 2.38
SNF8-217ENST00000576353 SBF1O95248 1867 aa29.89■■■□□ 2.38
SNF8-217ENST00000576353 F6X3S4 739 aa29.89■■■□□ 2.38
SNF8-217ENST00000576353 SP8Q8IXZ3 490 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms