RNA–Protein interactions for RNA: ENST00000575796.1

SPNS3-205, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-205ENST00000575796 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
SPNS3-205ENST00000575796 LAMB2P55268 1798 aa16.31■□□□□ 0.2
SPNS3-205ENST00000575796 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
SPNS3-205ENST00000575796 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
SPNS3-205ENST00000575796 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
SPNS3-205ENST00000575796 MRPL50Q8N5N7 158 aaKnown RBP16.31■□□□□ 0.2
SPNS3-205ENST00000575796 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
SPNS3-205ENST00000575796 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
SPNS3-205ENST00000575796 F6X3S4 739 aa16.3■□□□□ 0.2
SPNS3-205ENST00000575796 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
SPNS3-205ENST00000575796 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
SPNS3-205ENST00000575796 JARID2Q92833 1246 aaPredicted RBP16.3■□□□□ 0.2
SPNS3-205ENST00000575796 METTL22Q9BUU2 404 aaPredicted RBP16.3■□□□□ 0.2
SPNS3-205ENST00000575796 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
SPNS3-205ENST00000575796 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
SPNS3-205ENST00000575796 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
SPNS3-205ENST00000575796 H0YIN7 160 aa16.29■□□□□ 0.2
SPNS3-205ENST00000575796 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
SPNS3-205ENST00000575796 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
SPNS3-205ENST00000575796 PDE6BP35913 854 aa16.29■□□□□ 0.2
SPNS3-205ENST00000575796 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
SPNS3-205ENST00000575796 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
SPNS3-205ENST00000575796 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
SPNS3-205ENST00000575796 CWF19L2Q2TBE0 894 aaKnown RBP16.28■□□□□ 0.2
SPNS3-205ENST00000575796 ZNF622Q969S3 477 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPNS3-205ENST00000575796 PIM2Q9P1W9 311 aa16.28■□□□□ 0.2
SPNS3-205ENST00000575796 SLX4Q8IY92 1834 aa16.28■□□□□ 0.2
SPNS3-205ENST00000575796 KLRG2A4D1S0 409 aaPredicted RBP16.27■□□□□ 0.2
SPNS3-205ENST00000575796 SRGNP10124 158 aa16.27■□□□□ 0.2
SPNS3-205ENST00000575796 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
SPNS3-205ENST00000575796 DNAAF4Q8WXU2 420 aa16.27■□□□□ 0.2
SPNS3-205ENST00000575796 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
SPNS3-205ENST00000575796 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
SPNS3-205ENST00000575796 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
SPNS3-205ENST00000575796 DALRD3Q5D0E6 543 aaKnown RBP16.26■□□□□ 0.19
SPNS3-205ENST00000575796 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
SPNS3-205ENST00000575796 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
SPNS3-205ENST00000575796 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
SPNS3-205ENST00000575796 TAF1P21675 1872 aa16.25■□□□□ 0.19
SPNS3-205ENST00000575796 COL4A1P02462 1669 aa16.25■□□□□ 0.19
SPNS3-205ENST00000575796 NEURL1BA8MQ27 555 aa16.25■□□□□ 0.19
SPNS3-205ENST00000575796 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
SPNS3-205ENST00000575796 CWC25Q9NXE8 425 aaPredicted RBP16.25■□□□□ 0.19
SPNS3-205ENST00000575796 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
SPNS3-205ENST00000575796 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
SPNS3-205ENST00000575796 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
SPNS3-205ENST00000575796 SLC10A5Q5PT55 438 aa16.24■□□□□ 0.19
SPNS3-205ENST00000575796 TTLL6Q8N841 843 aa16.24■□□□□ 0.19
SPNS3-205ENST00000575796 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
SPNS3-205ENST00000575796 MASTLQ96GX5 879 aa16.24■□□□□ 0.19
SPNS3-205ENST00000575796 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
SPNS3-205ENST00000575796 CT47B1P0C2W7 299 aaPredicted RBP16.23■□□□□ 0.19
SPNS3-205ENST00000575796 NPR1P16066 1061 aa16.23■□□□□ 0.19
SPNS3-205ENST00000575796 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
SPNS3-205ENST00000575796 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
SPNS3-205ENST00000575796 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
SPNS3-205ENST00000575796 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
SPNS3-205ENST00000575796 CHD4Q14839 1912 aa16.23■□□□□ 0.19
SPNS3-205ENST00000575796 IRS4O14654 1257 aaPredicted RBP16.22■□□□□ 0.19
SPNS3-205ENST00000575796 BEND3Q5T5X7 828 aa16.22■□□□□ 0.19
SPNS3-205ENST00000575796 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
SPNS3-205ENST00000575796 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
SPNS3-205ENST00000575796 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
SPNS3-205ENST00000575796 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
SPNS3-205ENST00000575796 GRIN3BO60391 1043 aa16.21■□□□□ 0.19
SPNS3-205ENST00000575796 BCAR3O75815 825 aa16.21■□□□□ 0.19
SPNS3-205ENST00000575796 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
SPNS3-205ENST00000575796 GCKRQ14397 625 aa16.21■□□□□ 0.19
SPNS3-205ENST00000575796 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
SPNS3-205ENST00000575796 LINS1Q8NG48 757 aa16.21■□□□□ 0.19
SPNS3-205ENST00000575796 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
SPNS3-205ENST00000575796 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
SPNS3-205ENST00000575796 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
SPNS3-205ENST00000575796 C21orf2O43822 256 aa16.2■□□□□ 0.18
SPNS3-205ENST00000575796 UBE3BQ7Z3V4 1068 aa16.2■□□□□ 0.18
SPNS3-205ENST00000575796 CNKSR1Q969H4 720 aa16.2■□□□□ 0.18
SPNS3-205ENST00000575796 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
SPNS3-205ENST00000575796 PTPRCP08575 1304 aa16.19■□□□□ 0.18
SPNS3-205ENST00000575796 HOXA10P31260 410 aaPredicted RBP16.19■□□□□ 0.18
SPNS3-205ENST00000575796 RASSF7Q02833 373 aa16.19■□□□□ 0.18
SPNS3-205ENST00000575796 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
SPNS3-205ENST00000575796 ABCC4O15439 1325 aa16.19■□□□□ 0.18
SPNS3-205ENST00000575796 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
SPNS3-205ENST00000575796 MYH3P11055 1940 aa16.18■□□□□ 0.18
SPNS3-205ENST00000575796 H7C1W4 665 aa16.18■□□□□ 0.18
SPNS3-205ENST00000575796 PRELPP51888 382 aa16.18■□□□□ 0.18
SPNS3-205ENST00000575796 CASP7P55210 303 aa16.18■□□□□ 0.18
SPNS3-205ENST00000575796 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
SPNS3-205ENST00000575796 NFKBIEO00221 500 aa16.17■□□□□ 0.18
SPNS3-205ENST00000575796 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
SPNS3-205ENST00000575796 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
SPNS3-205ENST00000575796 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
SPNS3-205ENST00000575796 SBF1O95248 1867 aa16.16■□□□□ 0.18
SPNS3-205ENST00000575796 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
SPNS3-205ENST00000575796 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
SPNS3-205ENST00000575796 CCDC88AQ3V6T2 1871 aa16.16■□□□□ 0.18
SPNS3-205ENST00000575796 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
SPNS3-205ENST00000575796 PPEF1O14829 653 aaPredicted RBP16.15■□□□□ 0.18
SPNS3-205ENST00000575796 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
SPNS3-205ENST00000575796 SF3B3Q15393 1217 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms