RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 FMR1Q06787 632 aaKnown RBP eCLIP27.61■■■□□ 2.01
SPNS3-203ENST00000575185 DEFB115Q30KQ5 88 aa27.61■■■□□ 2.01
SPNS3-203ENST00000575185 TRPM7Q96QT4 1865 aa27.6■■■□□ 2.01
SPNS3-203ENST00000575185 HSPA8P11142 646 aaKnown RBP27.6■■■□□ 2.01
SPNS3-203ENST00000575185 TAF7Q15545 349 aaPredicted RBP27.6■■■□□ 2.01
SPNS3-203ENST00000575185 JDP2Q8WYK2 163 aa27.6■■■□□ 2.01
SPNS3-203ENST00000575185 ABT1Q9ULW3 272 aaKnown RBP27.6■■■□□ 2.01
SPNS3-203ENST00000575185 HTATSF1O43719 755 aaKnown RBP27.59■■■□□ 2.01
SPNS3-203ENST00000575185 TTLL7Q6ZT98 887 aa27.59■■■□□ 2.01
SPNS3-203ENST00000575185 UBN2Q6ZU65 1347 aa27.59■■■□□ 2.01
SPNS3-203ENST00000575185 WDR33Q9C0J8 1336 aaKnown RBP27.59■■■□□ 2.01
SPNS3-203ENST00000575185 GPTP24298 496 aa27.58■■■□□ 2.01
SPNS3-203ENST00000575185 NYXQ9GZU5 481 aa27.58■■■□□ 2.01
SPNS3-203ENST00000575185 MAP3K15Q6ZN16 1313 aa27.58■■■□□ 2.01
SPNS3-203ENST00000575185 RIC1Q4ADV7 1423 aa27.58■■■□□ 2
SPNS3-203ENST00000575185 SCNN1DP51172 638 aa27.57■■■□□ 2
SPNS3-203ENST00000575185 DDX21Q9NR30 783 aaKnown RBP eCLIP27.57■■■□□ 2
SPNS3-203ENST00000575185 EPS15P42566 896 aa27.56■■■□□ 2
SPNS3-203ENST00000575185 EIF6P56537 245 aaKnown RBP27.56■■■□□ 2
SPNS3-203ENST00000575185 RPGRQ92834 1020 aaKnown RBP27.56■■■□□ 2
SPNS3-203ENST00000575185 RRP7AQ9Y3A4 280 aaKnown RBP27.56■■■□□ 2
SPNS3-203ENST00000575185 ERVV-1B6SEH8 477 aa27.55■■■□□ 2
SPNS3-203ENST00000575185 TCERG1O14776 1098 aaKnown RBP27.55■■■□□ 2
SPNS3-203ENST00000575185 ZBTB3Q9H5J0 574 aa27.55■■■□□ 2
SPNS3-203ENST00000575185 MYL6BP14649 208 aa27.54■■■□□ 2
SPNS3-203ENST00000575185 LMOD1P29536 600 aaPredicted RBP27.54■■■□□ 2
SPNS3-203ENST00000575185 C3orf67Q6ZVT6 689 aa27.54■■■□□ 2
SPNS3-203ENST00000575185 LARGE2Q8N3Y3 721 aa27.54■■■□□ 2
SPNS3-203ENST00000575185 IBTKQ9P2D0 1353 aaPredicted RBP27.54■■■□□ 2
SPNS3-203ENST00000575185 HOXA10P31260 410 aaPredicted RBP27.53■■■□□ 2
SPNS3-203ENST00000575185 SUSD4Q5VX71 490 aa27.53■■■□□ 2
SPNS3-203ENST00000575185 CC2D2BQ6DHV5 1058 aa27.53■■■□□ 2
SPNS3-203ENST00000575185 KIF6Q6ZMV9 814 aa27.53■■■□□ 2
SPNS3-203ENST00000575185 TRAF5O00463 557 aa27.52■■■□□ 2
SPNS3-203ENST00000575185 PPEF1O14829 653 aaPredicted RBP27.52■■■□□ 2
SPNS3-203ENST00000575185 THUMPD2Q9BTF0 503 aaKnown RBP27.52■■■□□ 2
SPNS3-203ENST00000575185 LAMB2P55268 1798 aa27.52■■■□□ 2
SPNS3-203ENST00000575185 EIF4A1P60842 406 aaKnown RBP27.51■■□□□ 1.99
SPNS3-203ENST00000575185 MAP2K1Q02750 393 aaPredicted RBP27.51■■□□□ 1.99
SPNS3-203ENST00000575185 GRM1Q13255 1194 aa27.51■■□□□ 1.99
SPNS3-203ENST00000575185 PAXIP1Q6ZW49 1069 aaPredicted RBP27.51■■□□□ 1.99
SPNS3-203ENST00000575185 ABHD8Q96I13 439 aa27.51■■□□□ 1.99
SPNS3-203ENST00000575185 NTSR2O95665 410 aa27.5■■□□□ 1.99
SPNS3-203ENST00000575185 CYP4F22Q6NT55 531 aa27.49■■□□□ 1.99
SPNS3-203ENST00000575185 CAPNS2Q96L46 248 aa27.49■■□□□ 1.99
SPNS3-203ENST00000575185 CST9Q5W186 159 aa27.48■■□□□ 1.99
SPNS3-203ENST00000575185 ZNF34Q8IZ26 560 aa27.48■■□□□ 1.99
SPNS3-203ENST00000575185 RBM17Q96I25 401 aaKnown RBP27.48■■□□□ 1.99
SPNS3-203ENST00000575185 CRAMP1Q96RY5 1269 aa27.48■■□□□ 1.99
SPNS3-203ENST00000575185 NIM1KQ8IY84 436 aa27.47■■□□□ 1.99
SPNS3-203ENST00000575185 PNISRQ8TF01 805 aaKnown RBP27.47■■□□□ 1.99
SPNS3-203ENST00000575185 ANKRD36CQ5JPF3 1778 aa27.47■■□□□ 1.99
SPNS3-203ENST00000575185 PPIP5K2O43314 1243 aa27.46■■□□□ 1.99
SPNS3-203ENST00000575185 AOC3Q16853 763 aa27.46■■□□□ 1.99
SPNS3-203ENST00000575185 USP50Q70EL3 339 aaPredicted RBP27.46■■□□□ 1.99
SPNS3-203ENST00000575185 FAM161AQ3B820 660 aa27.44■■□□□ 1.98
SPNS3-203ENST00000575185 GRIPAP1Q4V328 841 aa27.44■■□□□ 1.98
SPNS3-203ENST00000575185 GIGYF2Q6Y7W6 1299 aaKnown RBP27.44■■□□□ 1.98
SPNS3-203ENST00000575185 TSKSQ9UJT2 592 aa27.44■■□□□ 1.98
SPNS3-203ENST00000575185 TAF1P21675 1872 aa27.43■■□□□ 1.98
SPNS3-203ENST00000575185 GPR101Q96P66 508 aaPredicted RBP27.43■■□□□ 1.98
SPNS3-203ENST00000575185 PLEKHF1Q96S99 279 aa27.43■■□□□ 1.98
SPNS3-203ENST00000575185 TLL2Q9Y6L7 1015 aa27.43■■□□□ 1.98
SPNS3-203ENST00000575185 AOC2O75106 756 aa27.42■■□□□ 1.98
SPNS3-203ENST00000575185 ECE1P42892 770 aa27.42■■□□□ 1.98
SPNS3-203ENST00000575185 GPRC5DQ9NZD1 345 aa27.42■■□□□ 1.98
SPNS3-203ENST00000575185 ABCC4O15439 1325 aa27.41■■□□□ 1.98
SPNS3-203ENST00000575185 NFE2L2Q16236 605 aa27.41■■□□□ 1.98
SPNS3-203ENST00000575185 NEFMP07197 916 aa27.4■■□□□ 1.98
SPNS3-203ENST00000575185 LRP10Q7Z4F1 713 aa27.4■■□□□ 1.98
SPNS3-203ENST00000575185 PPP1R42Q7Z4L9 355 aa27.4■■□□□ 1.98
SPNS3-203ENST00000575185 ADARB2Q9NS39 739 aaKnown RBP27.4■■□□□ 1.98
SPNS3-203ENST00000575185 ATP6V0A2Q9Y487 856 aa27.4■■□□□ 1.98
SPNS3-203ENST00000575185 CXCL9Q07325 125 aa27.39■■□□□ 1.98
SPNS3-203ENST00000575185 NLRP3Q96P20 1036 aa27.39■■□□□ 1.98
SPNS3-203ENST00000575185 BEGAINQ9BUH8 593 aa27.39■■□□□ 1.98
SPNS3-203ENST00000575185 ANXA1P04083 346 aa27.38■■□□□ 1.97
SPNS3-203ENST00000575185 GMPSP49915 693 aaPredicted RBP27.38■■□□□ 1.97
SPNS3-203ENST00000575185 PROSER3Q2NL68 480 aa27.38■■□□□ 1.97
SPNS3-203ENST00000575185 PARP10Q53GL7 1025 aa27.38■■□□□ 1.97
SPNS3-203ENST00000575185 ERBB4Q15303 1308 aa27.38■■□□□ 1.97
SPNS3-203ENST00000575185 PDIA6Q15084 440 aa27.37■■□□□ 1.97
SPNS3-203ENST00000575185 GLIS2Q9BZE0 524 aaPredicted RBP27.37■■□□□ 1.97
SPNS3-203ENST00000575185 ZNRF3Q9ULT6 936 aa27.37■■□□□ 1.97
SPNS3-203ENST00000575185 DUOX1Q9NRD9 1551 aa27.36■■□□□ 1.97
SPNS3-203ENST00000575185 CELF2O95319 508 aaKnown RBP27.36■■□□□ 1.97
SPNS3-203ENST00000575185 UTP14AQ9BVJ6 771 aaKnown RBP27.36■■□□□ 1.97
SPNS3-203ENST00000575185 CASP8AP2Q9UKL3 1982 aa27.36■■□□□ 1.97
SPNS3-203ENST00000575185 CCDC85CA6NKD9 419 aa27.35■■□□□ 1.97
SPNS3-203ENST00000575185 EIF2S2P20042 333 aaKnown RBP27.35■■□□□ 1.97
SPNS3-203ENST00000575185 SAPCD2Q86UD0 394 aa27.35■■□□□ 1.97
SPNS3-203ENST00000575185 RTFDC1Q9BY42 306 aaPredicted RBP27.35■■□□□ 1.97
SPNS3-203ENST00000575185 TMX4Q9H1E5 349 aaPredicted RBP27.35■■□□□ 1.97
SPNS3-203ENST00000575185 LRRC37AA6NMS7 1700 aa27.34■■□□□ 1.97
SPNS3-203ENST00000575185 SLC10A5Q5PT55 438 aa27.34■■□□□ 1.97
SPNS3-203ENST00000575185 TSPYL4Q9UJ04 414 aa27.34■■□□□ 1.97
SPNS3-203ENST00000575185 DPP8Q6V1X1 898 aaPredicted RBP27.33■■□□□ 1.97
SPNS3-203ENST00000575185 VPS33BQ9H267 617 aa27.33■■□□□ 1.97
SPNS3-203ENST00000575185 ZNF408Q9H9D4 720 aa27.33■■□□□ 1.97
SPNS3-203ENST00000575185 DDX60Q8IY21 1712 aaKnown RBP27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms