RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 ISCA1Q9BUE6 129 aa31.02■■■□□ 2.56
LITAF-213ENST00000574701 PIM2Q9P1W9 311 aa31.02■■■□□ 2.56
LITAF-213ENST00000574701 ATP5J2-PTCD1G3V325 749 aa31.01■■■□□ 2.55
LITAF-213ENST00000574701 METTL22Q9BUU2 404 aaPredicted RBP31.01■■■□□ 2.55
LITAF-213ENST00000574701 ADCY9O60503 1353 aa31.01■■■□□ 2.55
LITAF-213ENST00000574701 ABCC12Q96J65 1359 aa31.01■■■□□ 2.55
LITAF-213ENST00000574701 RIC1Q4ADV7 1423 aa31■■■□□ 2.55
LITAF-213ENST00000574701 NEXNQ0ZGT2 675 aa31■■■□□ 2.55
LITAF-213ENST00000574701 ERFEQ4G0M1 354 aa31■■■□□ 2.55
LITAF-213ENST00000574701 TRMT112Q9UI30 125 aaKnown RBP30.99■■■□□ 2.55
LITAF-213ENST00000574701 BCS1LQ9Y276 419 aa30.99■■■□□ 2.55
LITAF-213ENST00000574701 TNRC6CQ9HCJ0 1690 aaKnown RBP30.99■■■□□ 2.55
LITAF-213ENST00000574701 YBX3P16989 372 aaKnown RBP eCLIP30.98■■■□□ 2.55
LITAF-213ENST00000574701 KCNA3P22001 575 aa30.98■■■□□ 2.55
LITAF-213ENST00000574701 GRIN3BO60391 1043 aa30.97■■■□□ 2.55
LITAF-213ENST00000574701 TRIM28Q13263 835 aaKnown RBP30.97■■■□□ 2.55
LITAF-213ENST00000574701 ALDH1L2Q3SY69 923 aa30.97■■■□□ 2.55
LITAF-213ENST00000574701 DALRD3Q5D0E6 543 aaKnown RBP30.97■■■□□ 2.55
LITAF-213ENST00000574701 SH3TC1Q8TE82 1336 aa30.97■■■□□ 2.55
LITAF-213ENST00000574701 ZNF622Q969S3 477 aaKnown RBP eCLIP30.96■■■□□ 2.55
LITAF-213ENST00000574701 ARFGEF1Q9Y6D6 1849 aa30.96■■■□□ 2.55
LITAF-213ENST00000574701 CCDC191Q8NCU4 936 aa30.95■■■□□ 2.55
LITAF-213ENST00000574701 DNAAF4Q8WXU2 420 aa30.95■■■□□ 2.55
LITAF-213ENST00000574701 SSH1Q8WYL5 1049 aa30.95■■■□□ 2.55
LITAF-213ENST00000574701 MRPL50Q8N5N7 158 aaKnown RBP30.94■■■□□ 2.54
LITAF-213ENST00000574701 MASTLQ96GX5 879 aa30.94■■■□□ 2.54
LITAF-213ENST00000574701 SMC4Q9NTJ3 1288 aa30.94■■■□□ 2.54
LITAF-213ENST00000574701 CWC25Q9NXE8 425 aaPredicted RBP30.94■■■□□ 2.54
LITAF-213ENST00000574701 TTLL6Q8N841 843 aa30.93■■■□□ 2.54
LITAF-213ENST00000574701 SRGNP10124 158 aa30.92■■■□□ 2.54
LITAF-213ENST00000574701 STYK1Q6J9G0 422 aa30.92■■■□□ 2.54
LITAF-213ENST00000574701 BCL2L13Q9BXK5 485 aa30.92■■■□□ 2.54
LITAF-213ENST00000574701 CACNA1SQ13698 1873 aa30.92■■■□□ 2.54
LITAF-213ENST00000574701 KLRG2A4D1S0 409 aaPredicted RBP30.91■■■□□ 2.54
LITAF-213ENST00000574701 NPR1P16066 1061 aa30.91■■■□□ 2.54
LITAF-213ENST00000574701 CNKSR1Q969H4 720 aa30.91■■■□□ 2.54
LITAF-213ENST00000574701 NLRP3Q96P20 1036 aa30.91■■■□□ 2.54
LITAF-213ENST00000574701 LAMB2P55268 1798 aa30.91■■■□□ 2.54
LITAF-213ENST00000574701 PTPRCP08575 1304 aa30.9■■■□□ 2.54
LITAF-213ENST00000574701 SLC10A5Q5PT55 438 aa30.89■■■□□ 2.54
LITAF-213ENST00000574701 ZBTB38Q8NAP3 1195 aaPredicted RBP30.89■■■□□ 2.54
LITAF-213ENST00000574701 RPGRQ92834 1020 aaKnown RBP30.89■■■□□ 2.54
LITAF-213ENST00000574701 DDX60Q8IY21 1712 aaKnown RBP30.89■■■□□ 2.54
LITAF-213ENST00000574701 IGKV5-2P06315 115 aa30.88■■■□□ 2.53
LITAF-213ENST00000574701 FAM89AQ96GI7 184 aa30.88■■■□□ 2.53
LITAF-213ENST00000574701 NEURL1BA8MQ27 555 aa30.87■■■□□ 2.53
LITAF-213ENST00000574701 F6X3S4 739 aa30.87■■■□□ 2.53
LITAF-213ENST00000574701 HSP90B1P14625 803 aaKnown RBP30.87■■■□□ 2.53
LITAF-213ENST00000574701 CRY2Q49AN0 593 aa30.87■■■□□ 2.53
LITAF-213ENST00000574701 PCCAP05165 728 aaPredicted RBP30.86■■■□□ 2.53
LITAF-213ENST00000574701 HCLS1P14317 486 aaPredicted RBP30.86■■■□□ 2.53
LITAF-213ENST00000574701 CWF19L2Q2TBE0 894 aaKnown RBP30.86■■■□□ 2.53
LITAF-213ENST00000574701 RTL5Q5HYW3 569 aaPredicted RBP30.86■■■□□ 2.53
LITAF-213ENST00000574701 LINS1Q8NG48 757 aa30.86■■■□□ 2.53
LITAF-213ENST00000574701 CHD4Q14839 1912 aa30.85■■■□□ 2.53
LITAF-213ENST00000574701 SYNE4Q8N205 404 aa30.85■■■□□ 2.53
LITAF-213ENST00000574701 IRS4O14654 1257 aaPredicted RBP30.84■■■□□ 2.53
LITAF-213ENST00000574701 ALDH1B1P30837 517 aa30.84■■■□□ 2.53
LITAF-213ENST00000574701 RARSP54136 660 aaKnown RBP30.84■■■□□ 2.53
LITAF-213ENST00000574701 PRPF40BQ6NWY9 871 aaKnown RBP30.83■■■□□ 2.53
LITAF-213ENST00000574701 SLC4A10Q6U841 1118 aa30.83■■■□□ 2.53
LITAF-213ENST00000574701 RBM17Q96I25 401 aaKnown RBP30.83■■■□□ 2.53
LITAF-213ENST00000574701 KIF16BQ96L93 1317 aa30.82■■■□□ 2.52
LITAF-213ENST00000574701 C3orf67Q6ZVT6 689 aa30.82■■■□□ 2.52
LITAF-213ENST00000574701 SLX4Q8IY92 1834 aa30.82■■■□□ 2.52
LITAF-213ENST00000574701 BRPF1P55201 1214 aaPredicted RBP30.81■■■□□ 2.52
LITAF-213ENST00000574701 CDHR2Q9BYE9 1310 aa30.8■■■□□ 2.52
LITAF-213ENST00000574701 GCKRQ14397 625 aa30.8■■■□□ 2.52
LITAF-213ENST00000574701 BEND3Q5T5X7 828 aa30.8■■■□□ 2.52
LITAF-213ENST00000574701 ARHGAP27Q6ZUM4 889 aa30.8■■■□□ 2.52
LITAF-213ENST00000574701 HOXA10P31260 410 aaPredicted RBP30.79■■■□□ 2.52
LITAF-213ENST00000574701 SOGA3Q5TF21 947 aa30.78■■■□□ 2.52
LITAF-213ENST00000574701 CRAMP1Q96RY5 1269 aa30.78■■■□□ 2.52
LITAF-213ENST00000574701 SRCIN1Q9C0H9 1055 aa30.78■■■□□ 2.52
LITAF-213ENST00000574701 ZNF219Q9P2Y4 722 aaPredicted RBP30.78■■■□□ 2.52
LITAF-213ENST00000574701 ALDH1L1O75891 902 aa30.77■■■□□ 2.52
LITAF-213ENST00000574701 DDX46Q7L014 1031 aaKnown RBP30.77■■■□□ 2.52
LITAF-213ENST00000574701 JARID2Q92833 1246 aaPredicted RBP30.77■■■□□ 2.52
LITAF-213ENST00000574701 NOB1Q9ULX3 412 aaKnown RBP30.77■■■□□ 2.52
LITAF-213ENST00000574701 C21orf2O43822 256 aa30.76■■■□□ 2.51
LITAF-213ENST00000574701 PDE8AO60658 829 aa30.76■■■□□ 2.51
LITAF-213ENST00000574701 UBE3BQ7Z3V4 1068 aa30.76■■■□□ 2.51
LITAF-213ENST00000574701 API5Q9BZZ5 524 aaKnown RBP30.76■■■□□ 2.51
LITAF-213ENST00000574701 MYH3P11055 1940 aa30.76■■■□□ 2.51
LITAF-213ENST00000574701 SF3B3Q15393 1217 aaKnown RBP30.75■■■□□ 2.51
LITAF-213ENST00000574701 H7C1W4 665 aa30.74■■■□□ 2.51
LITAF-213ENST00000574701 YTHDC1Q96MU7 727 aaKnown RBP30.74■■■□□ 2.51
LITAF-213ENST00000574701 ABCC4O15439 1325 aa30.73■■■□□ 2.51
LITAF-213ENST00000574701 PPEF1O14829 653 aaPredicted RBP30.72■■■□□ 2.51
LITAF-213ENST00000574701 CCDC152Q4G0S7 254 aa30.72■■■□□ 2.51
LITAF-213ENST00000574701 CCDC93Q567U6 631 aa30.72■■■□□ 2.51
LITAF-213ENST00000574701 C9orf78Q9NZ63 289 aaPredicted RBP30.72■■■□□ 2.51
LITAF-213ENST00000574701 IPO8O15397 1037 aaKnown RBP30.71■■■□□ 2.51
LITAF-213ENST00000574701 TMX4Q9H1E5 349 aaPredicted RBP30.71■■■□□ 2.51
LITAF-213ENST00000574701 GOLGB1Q14789 3259 aaKnown RBP30.71■■■□□ 2.51
LITAF-213ENST00000574701 FER1L6Q2WGJ9 1857 aa30.7■■■□□ 2.51
LITAF-213ENST00000574701 GRM8O00222 908 aa30.7■■■□□ 2.51
LITAF-213ENST00000574701 BCAR3O75815 825 aa30.7■■■□□ 2.51
LITAF-213ENST00000574701 CTSWP56202 376 aa30.7■■■□□ 2.51
LITAF-213ENST00000574701 GRAPQ13588 217 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms