RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
ABR-228ENST00000574437 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
ABR-228ENST00000574437 ZC3H6P61129 1189 aaKnown RBP17.7■□□□□ 0.42
ABR-228ENST00000574437 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
ABR-228ENST00000574437 COL9A3Q14050 684 aaPredicted RBP17.7■□□□□ 0.42
ABR-228ENST00000574437 CDC37L1Q7L3B6 337 aa17.7■□□□□ 0.42
ABR-228ENST00000574437 LRRC59Q96AG4 307 aaKnown RBP17.7■□□□□ 0.42
ABR-228ENST00000574437 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
ABR-228ENST00000574437 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 TTC6Q86TZ1 520 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
ABR-228ENST00000574437 FUCA2Q9BTY2 467 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 NUP62CLQ9H1M0 184 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 BOLA2Q9H3K6 86 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 GCP02774 474 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 LIG1P18858 919 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
ABR-228ENST00000574437 ZNF530Q6P9A1 599 aaPredicted RBP17.69■□□□□ 0.42
ABR-228ENST00000574437 LUZP1Q86V48 1076 aa17.69■□□□□ 0.42
ABR-228ENST00000574437 GOLGA6L6A8MZA4 724 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 FSD1Q9BTV5 496 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 PXDNLA1KZ92 1463 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
ABR-228ENST00000574437 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
ABR-228ENST00000574437 ZNF335Q9H4Z2 1342 aaPredicted RBP17.67■□□□□ 0.42
ABR-228ENST00000574437 NECTIN1Q15223 517 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 KCNF1Q9H3M0 494 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 G3BP1Q13283 466 aaKnown RBP eCLIP17.67■□□□□ 0.42
ABR-228ENST00000574437 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 PTGS1P23219 599 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 CBX1P83916 185 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
ABR-228ENST00000574437 TNMDQ9H2S6 317 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
ABR-228ENST00000574437 ZNF710Q8N1W2 664 aa17.66■□□□□ 0.42
ABR-228ENST00000574437 KIAA1524Q8TCG1 905 aa17.66■□□□□ 0.42
ABR-228ENST00000574437 DBF4Q9UBU7 674 aaPredicted RBP17.66■□□□□ 0.42
ABR-228ENST00000574437 ADCY9O60503 1353 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 TYRO3Q06418 890 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 SPATA32Q96LK8 384 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 TM6SF1Q9BZW5 370 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 AXIN2Q9Y2T1 843 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 SLC27A2O14975 620 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 PSMA5P28066 241 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 SPTLC3Q9NUV7 552 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.65■□□□□ 0.42
ABR-228ENST00000574437 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
ABR-228ENST00000574437 TLR7Q9NYK1 1049 aaKnown RBP17.65■□□□□ 0.42
ABR-228ENST00000574437 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
ABR-228ENST00000574437 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
ABR-228ENST00000574437 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
ABR-228ENST00000574437 TRIM5Q9C035 493 aa17.64■□□□□ 0.41
ABR-228ENST00000574437 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
ABR-228ENST00000574437 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
ABR-228ENST00000574437 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.41
ABR-228ENST00000574437 ANO6Q4KMQ2 910 aa17.64■□□□□ 0.41
ABR-228ENST00000574437 LARP1Q6PKG0 1096 aaKnown RBP17.64■□□□□ 0.41
ABR-228ENST00000574437 RIOK3O14730 519 aaKnown RBP17.63■□□□□ 0.41
ABR-228ENST00000574437 PDCP20941 246 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
ABR-228ENST00000574437 FOSBP53539 338 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
ABR-228ENST00000574437 MRVI1Q9Y6F6 885 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 IP6K1Q92551 441 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
ABR-228ENST00000574437 TPM3P06753 285 aa17.62■□□□□ 0.41
ABR-228ENST00000574437 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
ABR-228ENST00000574437 MAP4K1Q92918 833 aa17.62■□□□□ 0.41
ABR-228ENST00000574437 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
ABR-228ENST00000574437 SASH1O94885 1247 aa17.62■□□□□ 0.41
ABR-228ENST00000574437 LRMPQ12912 555 aa17.62■□□□□ 0.41
ABR-228ENST00000574437 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
ABR-228ENST00000574437 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
ABR-228ENST00000574437 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
ABR-228ENST00000574437 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
ABR-228ENST00000574437 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 HIP1O00291 1037 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 HOXB7P09629 217 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 MTX1Q13505 466 aa17.61■□□□□ 0.41
ABR-228ENST00000574437 SMAP1Q8IYB5 467 aaPredicted RBP17.61■□□□□ 0.41
ABR-228ENST00000574437 C16orf45Q96MC5 204 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms