RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CCDC192P0DO97 292 aa18.64■□□□□ 0.57
NUP88-207ENST00000573584 C1orf141Q5JVX7 400 aa18.64■□□□□ 0.57
NUP88-207ENST00000573584 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.57
NUP88-207ENST00000573584 SLC27A2O14975 620 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 KRT85P78386 507 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.63■□□□□ 0.57
NUP88-207ENST00000573584 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 GRM8O00222 908 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 AP5Z1O43299 807 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 FERMT3Q86UX7 667 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 SUCLG2Q96I99 432 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
NUP88-207ENST00000573584 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 CHMP3Q9Y3E7 222 aa18.63■□□□□ 0.57
NUP88-207ENST00000573584 KIF13AQ9H1H9 1805 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 PDIA4P13667 645 aaKnown RBP18.62■□□□□ 0.57
NUP88-207ENST00000573584 PSME1Q06323 249 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 COL9A3Q14050 684 aaPredicted RBP18.62■□□□□ 0.57
NUP88-207ENST00000573584 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 TTC6Q86TZ1 520 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 BICC1Q9H694 974 aaKnown RBP18.62■□□□□ 0.57
NUP88-207ENST00000573584 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 PDCP20941 246 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 KAZALD1Q96I82 304 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
NUP88-207ENST00000573584 SETD1BQ9UPS6 1966 aaKnown RBP18.61■□□□□ 0.57
NUP88-207ENST00000573584 RNF20Q5VTR2 975 aa18.61■□□□□ 0.57
NUP88-207ENST00000573584 BLOC1S2Q6QNY1 142 aa18.61■□□□□ 0.57
NUP88-207ENST00000573584 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
NUP88-207ENST00000573584 LTN1O94822 1766 aa18.61■□□□□ 0.57
NUP88-207ENST00000573584 AIMP1Q12904 312 aaKnown RBP18.61■□□□□ 0.57
NUP88-207ENST00000573584 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
NUP88-207ENST00000573584 TCEANC2Q96MN5 208 aa18.61■□□□□ 0.57
NUP88-207ENST00000573584 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
NUP88-207ENST00000573584 A0A0D9SFI3 127 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 ANKRD1Q15327 319 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 SIL1Q9H173 461 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 PKNOX2Q96KN3 472 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 ARID3AQ99856 593 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 SNRKQ9NRH2 765 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 CAMK4Q16566 473 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 MAP3K11Q16584 847 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
NUP88-207ENST00000573584 NUP62CLQ9H1M0 184 aa18.6■□□□□ 0.57
NUP88-207ENST00000573584 NFAT5O94916 1531 aa18.59■□□□□ 0.57
NUP88-207ENST00000573584 DDX58O95786 925 aaKnown RBP18.59■□□□□ 0.57
NUP88-207ENST00000573584 TPM3P06753 285 aa18.59■□□□□ 0.57
NUP88-207ENST00000573584 LIG1P18858 919 aa18.59■□□□□ 0.57
NUP88-207ENST00000573584 JARID2Q92833 1246 aaPredicted RBP18.59■□□□□ 0.57
NUP88-207ENST00000573584 ELP1O95163 1332 aa18.59■□□□□ 0.57
NUP88-207ENST00000573584 RPS6KB1P23443 525 aa18.58■□□□□ 0.57
NUP88-207ENST00000573584 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.57
NUP88-207ENST00000573584 FAM200AQ8TCP9 573 aa18.58■□□□□ 0.57
NUP88-207ENST00000573584 TAF6LQ9Y6J9 622 aa18.58■□□□□ 0.57
NUP88-207ENST00000573584 UTYO14607 1347 aa18.58■□□□□ 0.57
NUP88-207ENST00000573584 HEG1Q9ULI3 1381 aa18.58■□□□□ 0.57
NUP88-207ENST00000573584 ADGRL3Q9HAR2 1447 aa18.58■□□□□ 0.56
NUP88-207ENST00000573584 KIAA1524Q8TCG1 905 aa18.58■□□□□ 0.56
NUP88-207ENST00000573584 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
NUP88-207ENST00000573584 GOLGA6L6A8MZA4 724 aa18.57■□□□□ 0.56
NUP88-207ENST00000573584 TSC1Q92574 1164 aa18.57■□□□□ 0.56
NUP88-207ENST00000573584 KCNF1Q9H3M0 494 aa18.57■□□□□ 0.56
NUP88-207ENST00000573584 KLHDC4Q8TBB5 520 aa18.57■□□□□ 0.56
NUP88-207ENST00000573584 SCAND2PQ9GZW5 306 aaPredicted RBP18.57■□□□□ 0.56
NUP88-207ENST00000573584 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
NUP88-207ENST00000573584 GTF2F1P35269 517 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUP88-207ENST00000573584 TYRO3Q06418 890 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 TFIP11Q9UBB9 837 aaKnown RBP18.56■□□□□ 0.56
NUP88-207ENST00000573584 LMO7Q8WWI1 1683 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 PXDNQ92626 1479 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 STK3Q13188 491 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 TOB2Q14106 344 aaPredicted RBP18.56■□□□□ 0.56
NUP88-207ENST00000573584 LARP1Q6PKG0 1096 aaKnown RBP18.56■□□□□ 0.56
NUP88-207ENST00000573584 SPATA32Q96LK8 384 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
NUP88-207ENST00000573584 DACT1Q9NYF0 836 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
NUP88-207ENST00000573584 NCAPD2Q15021 1401 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
NUP88-207ENST00000573584 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
NUP88-207ENST00000573584 IGKV5-2P06315 115 aa18.55■□□□□ 0.56
NUP88-207ENST00000573584 CKAP2LQ8IYA6 745 aa18.55■□□□□ 0.56
NUP88-207ENST00000573584 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
NUP88-207ENST00000573584 LUZP1Q86V48 1076 aa18.55■□□□□ 0.56
NUP88-207ENST00000573584 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
NUP88-207ENST00000573584 GCP02774 474 aa18.54■□□□□ 0.56
NUP88-207ENST00000573584 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
NUP88-207ENST00000573584 PDIA6Q15084 440 aa18.54■□□□□ 0.56
NUP88-207ENST00000573584 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
NUP88-207ENST00000573584 TSGA10IPQ3SY00 556 aa18.53■□□□□ 0.56
NUP88-207ENST00000573584 ANKRD24Q8TF21 1146 aa18.53■□□□□ 0.56
NUP88-207ENST00000573584 TAF5LO75529 589 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms